Protein–RNA interactions for Protein: A0A0B4J1H4

Trbv19, T cell receptor beta, variable 19 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv19A0A0B4J1H4 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC15.83■□□□□ 0.12
Trbv19A0A0B4J1H4 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC15.83■□□□□ 0.12
Trbv19A0A0B4J1H4 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv19A0A0B4J1H4 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv19A0A0B4J1H4 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv19A0A0B4J1H4 Gm43545-201ENSMUST00000196765 2779 ntBASIC15.83■□□□□ 0.12
Trbv19A0A0B4J1H4 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv19A0A0B4J1H4 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC15.83■□□□□ 0.12
Trbv19A0A0B4J1H4 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC15.83■□□□□ 0.12
Trbv19A0A0B4J1H4 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv19A0A0B4J1H4 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv19A0A0B4J1H4 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC15.82■□□□□ 0.12
Trbv19A0A0B4J1H4 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Trbv19A0A0B4J1H4 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv19A0A0B4J1H4 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv19A0A0B4J1H4 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv19A0A0B4J1H4 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Trbv19A0A0B4J1H4 Gm22238-201ENSMUST00000175222 88 ntBASIC15.82■□□□□ 0.12
Trbv19A0A0B4J1H4 AC093043.1-201ENSMUST00000226700 898 ntBASIC15.82■□□□□ 0.12
Trbv19A0A0B4J1H4 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Trbv19A0A0B4J1H4 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv19A0A0B4J1H4 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv19A0A0B4J1H4 Cdkn3-203ENSMUST00000227149 1952 ntBASIC15.82■□□□□ 0.12
Trbv19A0A0B4J1H4 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv19A0A0B4J1H4 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv19A0A0B4J1H4 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv19A0A0B4J1H4 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv19A0A0B4J1H4 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv19A0A0B4J1H4 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv19A0A0B4J1H4 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv19A0A0B4J1H4 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC15.81■□□□□ 0.12
Trbv19A0A0B4J1H4 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv19A0A0B4J1H4 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC15.81■□□□□ 0.12
Trbv19A0A0B4J1H4 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv19A0A0B4J1H4 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC15.81■□□□□ 0.12
Trbv19A0A0B4J1H4 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv19A0A0B4J1H4 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv19A0A0B4J1H4 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv19A0A0B4J1H4 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC15.81■□□□□ 0.12
Trbv19A0A0B4J1H4 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv19A0A0B4J1H4 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Trbv19A0A0B4J1H4 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC15.8■□□□□ 0.12
Trbv19A0A0B4J1H4 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Trbv19A0A0B4J1H4 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Trbv19A0A0B4J1H4 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv19A0A0B4J1H4 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv19A0A0B4J1H4 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
Trbv19A0A0B4J1H4 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC15.8■□□□□ 0.12
Trbv19A0A0B4J1H4 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv19A0A0B4J1H4 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv19A0A0B4J1H4 Iqck-206ENSMUST00000208658 2891 ntBASIC15.8■□□□□ 0.12
Trbv19A0A0B4J1H4 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Trbv19A0A0B4J1H4 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Trbv19A0A0B4J1H4 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
Trbv19A0A0B4J1H4 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv19A0A0B4J1H4 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv19A0A0B4J1H4 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv19A0A0B4J1H4 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC15.79■□□□□ 0.12
Trbv19A0A0B4J1H4 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv19A0A0B4J1H4 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC15.79■□□□□ 0.12
Trbv19A0A0B4J1H4 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC15.79■□□□□ 0.12
Trbv19A0A0B4J1H4 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv19A0A0B4J1H4 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv19A0A0B4J1H4 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv19A0A0B4J1H4 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv19A0A0B4J1H4 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Trbv19A0A0B4J1H4 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv19A0A0B4J1H4 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv19A0A0B4J1H4 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv19A0A0B4J1H4 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv19A0A0B4J1H4 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC15.78■□□□□ 0.12
Trbv19A0A0B4J1H4 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC15.78■□□□□ 0.12
Trbv19A0A0B4J1H4 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv19A0A0B4J1H4 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv19A0A0B4J1H4 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Trbv19A0A0B4J1H4 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Trbv19A0A0B4J1H4 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv19A0A0B4J1H4 Gm10616-201ENSMUST00000205285 2127 ntBASIC15.77■□□□□ 0.12
Trbv19A0A0B4J1H4 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv19A0A0B4J1H4 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv19A0A0B4J1H4 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv19A0A0B4J1H4 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv19A0A0B4J1H4 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv19A0A0B4J1H4 Krt8-ps-201ENSMUST00000208495 945 ntBASIC15.77■□□□□ 0.12
Trbv19A0A0B4J1H4 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trbv19A0A0B4J1H4 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Trbv19A0A0B4J1H4 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trbv19A0A0B4J1H4 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Trbv19A0A0B4J1H4 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Trbv19A0A0B4J1H4 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Trbv19A0A0B4J1H4 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trbv19A0A0B4J1H4 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
Trbv19A0A0B4J1H4 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv19A0A0B4J1H4 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv19A0A0B4J1H4 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv19A0A0B4J1H4 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv19A0A0B4J1H4 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv19A0A0B4J1H4 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC15.76■□□□□ 0.11
Trbv19A0A0B4J1H4 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Trbv19A0A0B4J1H4 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms