Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv3A0A0A6YYE2 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv3A0A0A6YYE2 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC15.2■□□□□ 0.02
Trbv3A0A0A6YYE2 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC15.2■□□□□ 0.02
Trbv3A0A0A6YYE2 Gm43592-201ENSMUST00000196922 1165 ntBASIC15.2■□□□□ 0.02
Trbv3A0A0A6YYE2 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC15.2■□□□□ 0.02
Trbv3A0A0A6YYE2 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv3A0A0A6YYE2 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv3A0A0A6YYE2 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv3A0A0A6YYE2 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv3A0A0A6YYE2 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv3A0A0A6YYE2 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv3A0A0A6YYE2 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv3A0A0A6YYE2 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Trbv3A0A0A6YYE2 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv3A0A0A6YYE2 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv3A0A0A6YYE2 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv3A0A0A6YYE2 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC15.19■□□□□ 0.02
Trbv3A0A0A6YYE2 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC15.19■□□□□ 0.02
Trbv3A0A0A6YYE2 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv3A0A0A6YYE2 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv3A0A0A6YYE2 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Trbv3A0A0A6YYE2 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv3A0A0A6YYE2 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv3A0A0A6YYE2 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv3A0A0A6YYE2 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Trbv3A0A0A6YYE2 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC15.18■□□□□ 0.02
Trbv3A0A0A6YYE2 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv3A0A0A6YYE2 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv3A0A0A6YYE2 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv3A0A0A6YYE2 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv3A0A0A6YYE2 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv3A0A0A6YYE2 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv3A0A0A6YYE2 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv3A0A0A6YYE2 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv3A0A0A6YYE2 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv3A0A0A6YYE2 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC15.17■□□□□ 0.02
Trbv3A0A0A6YYE2 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC15.17■□□□□ 0.02
Trbv3A0A0A6YYE2 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv3A0A0A6YYE2 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv3A0A0A6YYE2 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv3A0A0A6YYE2 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv3A0A0A6YYE2 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC15.17■□□□□ 0.02
Trbv3A0A0A6YYE2 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv3A0A0A6YYE2 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv3A0A0A6YYE2 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv3A0A0A6YYE2 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv3A0A0A6YYE2 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Trbv3A0A0A6YYE2 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trbv3A0A0A6YYE2 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Trbv3A0A0A6YYE2 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Trbv3A0A0A6YYE2 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trbv3A0A0A6YYE2 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trbv3A0A0A6YYE2 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trbv3A0A0A6YYE2 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trbv3A0A0A6YYE2 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trbv3A0A0A6YYE2 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Trbv3A0A0A6YYE2 Gm6627-201ENSMUST00000218299 2386 ntBASIC15.16■□□□□ 0.02
Trbv3A0A0A6YYE2 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trbv3A0A0A6YYE2 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trbv3A0A0A6YYE2 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trbv3A0A0A6YYE2 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trbv3A0A0A6YYE2 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trbv3A0A0A6YYE2 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Trbv3A0A0A6YYE2 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC15.16■□□□□ 0.02
Trbv3A0A0A6YYE2 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trbv3A0A0A6YYE2 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trbv3A0A0A6YYE2 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trbv3A0A0A6YYE2 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trbv3A0A0A6YYE2 Cdkn3-203ENSMUST00000227149 1952 ntBASIC15.15■□□□□ 0.02
Trbv3A0A0A6YYE2 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trbv3A0A0A6YYE2 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trbv3A0A0A6YYE2 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trbv3A0A0A6YYE2 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trbv3A0A0A6YYE2 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC15.15■□□□□ 0.02
Trbv3A0A0A6YYE2 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trbv3A0A0A6YYE2 Gm5540-201ENSMUST00000131852 1848 ntBASIC15.15■□□□□ 0.02
Trbv3A0A0A6YYE2 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trbv3A0A0A6YYE2 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trbv3A0A0A6YYE2 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC15.15■□□□□ 0.02
Trbv3A0A0A6YYE2 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trbv3A0A0A6YYE2 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trbv3A0A0A6YYE2 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trbv3A0A0A6YYE2 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Trbv3A0A0A6YYE2 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Trbv3A0A0A6YYE2 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trbv3A0A0A6YYE2 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trbv3A0A0A6YYE2 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trbv3A0A0A6YYE2 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trbv3A0A0A6YYE2 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Trbv3A0A0A6YYE2 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trbv3A0A0A6YYE2 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trbv3A0A0A6YYE2 BC021767-201ENSMUST00000126387 1716 ntBASIC15.14■□□□□ 0.01
Trbv3A0A0A6YYE2 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trbv3A0A0A6YYE2 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
Trbv3A0A0A6YYE2 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trbv3A0A0A6YYE2 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trbv3A0A0A6YYE2 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbv3A0A0A6YYE2 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trbv3A0A0A6YYE2 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms