Protein–RNA interactions for Protein: A0A0A6YY41

Ighv1-47, Immunoglobulin heavy variable 1-47 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-47A0A0A6YY41 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ighv1-47A0A0A6YY41 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ighv1-47A0A0A6YY41 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC16.26■□□□□ 0.19
Ighv1-47A0A0A6YY41 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ighv1-47A0A0A6YY41 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC16.26■□□□□ 0.19
Ighv1-47A0A0A6YY41 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC16.26■□□□□ 0.19
Ighv1-47A0A0A6YY41 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Ighv1-47A0A0A6YY41 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ighv1-47A0A0A6YY41 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ighv1-47A0A0A6YY41 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ighv1-47A0A0A6YY41 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ighv1-47A0A0A6YY41 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ighv1-47A0A0A6YY41 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ighv1-47A0A0A6YY41 Gm43909-201ENSMUST00000203443 1876 ntBASIC16.25■□□□□ 0.19
Ighv1-47A0A0A6YY41 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC16.25■□□□□ 0.19
Ighv1-47A0A0A6YY41 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ighv1-47A0A0A6YY41 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Ighv1-47A0A0A6YY41 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC16.25■□□□□ 0.19
Ighv1-47A0A0A6YY41 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC16.25■□□□□ 0.19
Ighv1-47A0A0A6YY41 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ighv1-47A0A0A6YY41 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ighv1-47A0A0A6YY41 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ighv1-47A0A0A6YY41 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ighv1-47A0A0A6YY41 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ighv1-47A0A0A6YY41 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ighv1-47A0A0A6YY41 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ighv1-47A0A0A6YY41 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ighv1-47A0A0A6YY41 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC16.24■□□□□ 0.19
Ighv1-47A0A0A6YY41 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ighv1-47A0A0A6YY41 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ighv1-47A0A0A6YY41 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ighv1-47A0A0A6YY41 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ighv1-47A0A0A6YY41 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ighv1-47A0A0A6YY41 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ighv1-47A0A0A6YY41 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ighv1-47A0A0A6YY41 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Ighv1-47A0A0A6YY41 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ighv1-47A0A0A6YY41 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ighv1-47A0A0A6YY41 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC16.23■□□□□ 0.19
Ighv1-47A0A0A6YY41 Gm10657-201ENSMUST00000193528 1031 ntBASIC16.23■□□□□ 0.19
Ighv1-47A0A0A6YY41 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Ighv1-47A0A0A6YY41 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ighv1-47A0A0A6YY41 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC16.23■□□□□ 0.19
Ighv1-47A0A0A6YY41 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC16.23■□□□□ 0.19
Ighv1-47A0A0A6YY41 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ighv1-47A0A0A6YY41 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Ighv1-47A0A0A6YY41 AC166356.1-201ENSMUST00000228236 1426 ntBASIC16.22■□□□□ 0.19
Ighv1-47A0A0A6YY41 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ighv1-47A0A0A6YY41 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Ighv1-47A0A0A6YY41 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ighv1-47A0A0A6YY41 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Ighv1-47A0A0A6YY41 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ighv1-47A0A0A6YY41 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ighv1-47A0A0A6YY41 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Ighv1-47A0A0A6YY41 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ighv1-47A0A0A6YY41 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ighv1-47A0A0A6YY41 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ighv1-47A0A0A6YY41 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ighv1-47A0A0A6YY41 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ighv1-47A0A0A6YY41 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ighv1-47A0A0A6YY41 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Ighv1-47A0A0A6YY41 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
Ighv1-47A0A0A6YY41 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ighv1-47A0A0A6YY41 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ighv1-47A0A0A6YY41 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC16.21■□□□□ 0.19
Ighv1-47A0A0A6YY41 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ighv1-47A0A0A6YY41 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ighv1-47A0A0A6YY41 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ighv1-47A0A0A6YY41 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
Ighv1-47A0A0A6YY41 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ighv1-47A0A0A6YY41 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ighv1-47A0A0A6YY41 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ighv1-47A0A0A6YY41 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ighv1-47A0A0A6YY41 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ighv1-47A0A0A6YY41 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ighv1-47A0A0A6YY41 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC16.2■□□□□ 0.18
Ighv1-47A0A0A6YY41 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC16.2■□□□□ 0.18
Ighv1-47A0A0A6YY41 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC16.2■□□□□ 0.18
Ighv1-47A0A0A6YY41 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC16.2■□□□□ 0.18
Ighv1-47A0A0A6YY41 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC16.2■□□□□ 0.18
Ighv1-47A0A0A6YY41 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
Ighv1-47A0A0A6YY41 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC16.2■□□□□ 0.18
Ighv1-47A0A0A6YY41 Gm43530-201ENSMUST00000195920 274 ntBASIC16.2■□□□□ 0.18
Ighv1-47A0A0A6YY41 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ighv1-47A0A0A6YY41 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ighv1-47A0A0A6YY41 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ighv1-47A0A0A6YY41 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ighv1-47A0A0A6YY41 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ighv1-47A0A0A6YY41 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ighv1-47A0A0A6YY41 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv1-47A0A0A6YY41 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv1-47A0A0A6YY41 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv1-47A0A0A6YY41 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv1-47A0A0A6YY41 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv1-47A0A0A6YY41 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv1-47A0A0A6YY41 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv1-47A0A0A6YY41 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv1-47A0A0A6YY41 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv1-47A0A0A6YY41 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv1-47A0A0A6YY41 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms