Protein–RNA interactions for Protein: A0A0A6YX06

Trbv21, T cell receptor beta, variable 21 (Fragment), mousemouse

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv21A0A0A6YX06 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trbv21A0A0A6YX06 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.3■□□□□ 0.52
Trbv21A0A0A6YX06 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.3■□□□□ 0.52
Trbv21A0A0A6YX06 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trbv21A0A0A6YX06 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trbv21A0A0A6YX06 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trbv21A0A0A6YX06 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.3■□□□□ 0.52
Trbv21A0A0A6YX06 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.3■□□□□ 0.52
Trbv21A0A0A6YX06 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trbv21A0A0A6YX06 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
Trbv21A0A0A6YX06 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.3■□□□□ 0.52
Trbv21A0A0A6YX06 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trbv21A0A0A6YX06 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trbv21A0A0A6YX06 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trbv21A0A0A6YX06 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trbv21A0A0A6YX06 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trbv21A0A0A6YX06 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trbv21A0A0A6YX06 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
Trbv21A0A0A6YX06 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.29■□□□□ 0.52
Trbv21A0A0A6YX06 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.29■□□□□ 0.52
Trbv21A0A0A6YX06 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trbv21A0A0A6YX06 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Trbv21A0A0A6YX06 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.29■□□□□ 0.52
Trbv21A0A0A6YX06 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trbv21A0A0A6YX06 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trbv21A0A0A6YX06 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trbv21A0A0A6YX06 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trbv21A0A0A6YX06 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trbv21A0A0A6YX06 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trbv21A0A0A6YX06 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.28■□□□□ 0.52
Trbv21A0A0A6YX06 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trbv21A0A0A6YX06 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trbv21A0A0A6YX06 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
Trbv21A0A0A6YX06 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trbv21A0A0A6YX06 Golph3-202ENSMUST00000226517 2359 ntBASIC18.28■□□□□ 0.52
Trbv21A0A0A6YX06 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trbv21A0A0A6YX06 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trbv21A0A0A6YX06 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.28■□□□□ 0.52
Trbv21A0A0A6YX06 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trbv21A0A0A6YX06 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Trbv21A0A0A6YX06 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.27■□□□□ 0.52
Trbv21A0A0A6YX06 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trbv21A0A0A6YX06 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trbv21A0A0A6YX06 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trbv21A0A0A6YX06 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trbv21A0A0A6YX06 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trbv21A0A0A6YX06 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trbv21A0A0A6YX06 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.27■□□□□ 0.52
Trbv21A0A0A6YX06 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.27■□□□□ 0.52
Trbv21A0A0A6YX06 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trbv21A0A0A6YX06 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trbv21A0A0A6YX06 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trbv21A0A0A6YX06 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trbv21A0A0A6YX06 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.26■□□□□ 0.51
Trbv21A0A0A6YX06 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trbv21A0A0A6YX06 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trbv21A0A0A6YX06 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.26■□□□□ 0.51
Trbv21A0A0A6YX06 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trbv21A0A0A6YX06 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trbv21A0A0A6YX06 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.26■□□□□ 0.51
Trbv21A0A0A6YX06 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trbv21A0A0A6YX06 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trbv21A0A0A6YX06 AA386476-201ENSMUST00000098781 1665 ntBASIC18.25■□□□□ 0.51
Trbv21A0A0A6YX06 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trbv21A0A0A6YX06 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trbv21A0A0A6YX06 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trbv21A0A0A6YX06 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Trbv21A0A0A6YX06 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trbv21A0A0A6YX06 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trbv21A0A0A6YX06 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trbv21A0A0A6YX06 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trbv21A0A0A6YX06 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trbv21A0A0A6YX06 Gm15823-201ENSMUST00000064305 670 ntBASIC18.24■□□□□ 0.51
Trbv21A0A0A6YX06 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trbv21A0A0A6YX06 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trbv21A0A0A6YX06 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trbv21A0A0A6YX06 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trbv21A0A0A6YX06 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
Trbv21A0A0A6YX06 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trbv21A0A0A6YX06 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Trbv21A0A0A6YX06 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv21A0A0A6YX06 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv21A0A0A6YX06 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
Trbv21A0A0A6YX06 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv21A0A0A6YX06 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv21A0A0A6YX06 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.23■□□□□ 0.51
Trbv21A0A0A6YX06 AC154532.1-201ENSMUST00000227860 965 ntBASIC18.23■□□□□ 0.51
Trbv21A0A0A6YX06 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv21A0A0A6YX06 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv21A0A0A6YX06 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
Trbv21A0A0A6YX06 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trbv21A0A0A6YX06 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trbv21A0A0A6YX06 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trbv21A0A0A6YX06 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trbv21A0A0A6YX06 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trbv21A0A0A6YX06 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trbv21A0A0A6YX06 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trbv21A0A0A6YX06 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trbv21A0A0A6YX06 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trbv21A0A0A6YX06 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms