Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6-4A0A075B6B4 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Trav6-4A0A075B6B4 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC15.17■□□□□ 0.02
Trav6-4A0A075B6B4 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Trav6-4A0A075B6B4 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6-4A0A075B6B4 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6-4A0A075B6B4 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6-4A0A075B6B4 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6-4A0A075B6B4 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Trav6-4A0A075B6B4 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC15.17■□□□□ 0.02
Trav6-4A0A075B6B4 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC15.17■□□□□ 0.02
Trav6-4A0A075B6B4 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6-4A0A075B6B4 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6-4A0A075B6B4 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6-4A0A075B6B4 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6-4A0A075B6B4 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Trav6-4A0A075B6B4 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6-4A0A075B6B4 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Trav6-4A0A075B6B4 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6-4A0A075B6B4 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6-4A0A075B6B4 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6-4A0A075B6B4 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6-4A0A075B6B4 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC15.16■□□□□ 0.02
Trav6-4A0A075B6B4 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Trav6-4A0A075B6B4 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6-4A0A075B6B4 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC15.16■□□□□ 0.02
Trav6-4A0A075B6B4 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC15.16■□□□□ 0.02
Trav6-4A0A075B6B4 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Trav6-4A0A075B6B4 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6-4A0A075B6B4 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Trav6-4A0A075B6B4 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6-4A0A075B6B4 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6-4A0A075B6B4 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6-4A0A075B6B4 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6-4A0A075B6B4 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6-4A0A075B6B4 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6-4A0A075B6B4 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6-4A0A075B6B4 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6-4A0A075B6B4 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6-4A0A075B6B4 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6-4A0A075B6B4 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6-4A0A075B6B4 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Trav6-4A0A075B6B4 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Trav6-4A0A075B6B4 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Trav6-4A0A075B6B4 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6-4A0A075B6B4 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6-4A0A075B6B4 Gm6085-201ENSMUST00000182774 1470 ntBASIC15.14■□□□□ 0.01
Trav6-4A0A075B6B4 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6-4A0A075B6B4 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6-4A0A075B6B4 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6-4A0A075B6B4 Gm15043-201ENSMUST00000118843 1543 ntBASIC15.14■□□□□ 0.01
Trav6-4A0A075B6B4 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6-4A0A075B6B4 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC15.14■□□□□ 0.01
Trav6-4A0A075B6B4 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC15.14■□□□□ 0.01
Trav6-4A0A075B6B4 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6-4A0A075B6B4 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Trav6-4A0A075B6B4 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC15.14■□□□□ 0.01
Trav6-4A0A075B6B4 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Trav6-4A0A075B6B4 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6-4A0A075B6B4 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6-4A0A075B6B4 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6-4A0A075B6B4 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6-4A0A075B6B4 Gm10209-201ENSMUST00000203397 1607 ntBASIC15.14■□□□□ 0.01
Trav6-4A0A075B6B4 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6-4A0A075B6B4 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Trav6-4A0A075B6B4 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6-4A0A075B6B4 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6-4A0A075B6B4 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC15.13■□□□□ 0.01
Trav6-4A0A075B6B4 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6-4A0A075B6B4 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
Trav6-4A0A075B6B4 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6-4A0A075B6B4 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Trav6-4A0A075B6B4 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC15.13■□□□□ 0.01
Trav6-4A0A075B6B4 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6-4A0A075B6B4 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6-4A0A075B6B4 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6-4A0A075B6B4 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6-4A0A075B6B4 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6-4A0A075B6B4 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Trav6-4A0A075B6B4 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6-4A0A075B6B4 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6-4A0A075B6B4 Gm7160-202ENSMUST00000188519 1027 ntBASIC15.12■□□□□ 0.01
Trav6-4A0A075B6B4 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6-4A0A075B6B4 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6-4A0A075B6B4 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6-4A0A075B6B4 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6-4A0A075B6B4 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Trav6-4A0A075B6B4 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6-4A0A075B6B4 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6-4A0A075B6B4 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6-4A0A075B6B4 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6-4A0A075B6B4 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Trav6-4A0A075B6B4 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6-4A0A075B6B4 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6-4A0A075B6B4 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6-4A0A075B6B4 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6-4A0A075B6B4 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC15.11■□□□□ 0.01
Trav6-4A0A075B6B4 Gm27454-201ENSMUST00000185090 204 ntBASIC15.11■□□□□ 0.01
Trav6-4A0A075B6B4 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6-4A0A075B6B4 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms