Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav4-2A0A075B638 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav4-2A0A075B638 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav4-2A0A075B638 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav4-2A0A075B638 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav4-2A0A075B638 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trav4-2A0A075B638 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav4-2A0A075B638 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav4-2A0A075B638 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav4-2A0A075B638 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav4-2A0A075B638 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC15.6■□□□□ 0.09
Trav4-2A0A075B638 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav4-2A0A075B638 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav4-2A0A075B638 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav4-2A0A075B638 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Trav4-2A0A075B638 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Trav4-2A0A075B638 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav4-2A0A075B638 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Trav4-2A0A075B638 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav4-2A0A075B638 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav4-2A0A075B638 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav4-2A0A075B638 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav4-2A0A075B638 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav4-2A0A075B638 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav4-2A0A075B638 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav4-2A0A075B638 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC15.59■□□□□ 0.09
Trav4-2A0A075B638 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC15.59■□□□□ 0.09
Trav4-2A0A075B638 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav4-2A0A075B638 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav4-2A0A075B638 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav4-2A0A075B638 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav4-2A0A075B638 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Trav4-2A0A075B638 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC15.59■□□□□ 0.09
Trav4-2A0A075B638 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav4-2A0A075B638 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Trav4-2A0A075B638 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav4-2A0A075B638 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav4-2A0A075B638 Cdkn3-203ENSMUST00000227149 1952 ntBASIC15.58■□□□□ 0.09
Trav4-2A0A075B638 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav4-2A0A075B638 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav4-2A0A075B638 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav4-2A0A075B638 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav4-2A0A075B638 Gm7332-201ENSMUST00000118351 454 ntBASIC15.58■□□□□ 0.08
Trav4-2A0A075B638 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC15.58■□□□□ 0.08
Trav4-2A0A075B638 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav4-2A0A075B638 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trav4-2A0A075B638 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav4-2A0A075B638 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC15.58■□□□□ 0.08
Trav4-2A0A075B638 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav4-2A0A075B638 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Trav4-2A0A075B638 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav4-2A0A075B638 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC15.57■□□□□ 0.08
Trav4-2A0A075B638 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Trav4-2A0A075B638 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav4-2A0A075B638 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav4-2A0A075B638 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav4-2A0A075B638 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav4-2A0A075B638 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav4-2A0A075B638 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav4-2A0A075B638 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Trav4-2A0A075B638 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav4-2A0A075B638 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav4-2A0A075B638 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav4-2A0A075B638 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC15.56■□□□□ 0.08
Trav4-2A0A075B638 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC15.56■□□□□ 0.08
Trav4-2A0A075B638 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC15.56■□□□□ 0.08
Trav4-2A0A075B638 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav4-2A0A075B638 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav4-2A0A075B638 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav4-2A0A075B638 Gm10620-201ENSMUST00000098379 1332 ntBASIC15.56■□□□□ 0.08
Trav4-2A0A075B638 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav4-2A0A075B638 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav4-2A0A075B638 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav4-2A0A075B638 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav4-2A0A075B638 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC15.56■□□□□ 0.08
Trav4-2A0A075B638 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav4-2A0A075B638 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Trav4-2A0A075B638 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC15.56■□□□□ 0.08
Trav4-2A0A075B638 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Trav4-2A0A075B638 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav4-2A0A075B638 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav4-2A0A075B638 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav4-2A0A075B638 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC15.55■□□□□ 0.08
Trav4-2A0A075B638 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav4-2A0A075B638 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Trav4-2A0A075B638 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav4-2A0A075B638 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav4-2A0A075B638 Gm27502-201ENSMUST00000183495 199 ntBASIC15.55■□□□□ 0.08
Trav4-2A0A075B638 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav4-2A0A075B638 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav4-2A0A075B638 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Trav4-2A0A075B638 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Trav4-2A0A075B638 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC15.54■□□□□ 0.08
Trav4-2A0A075B638 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav4-2A0A075B638 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav4-2A0A075B638 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav4-2A0A075B638 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav4-2A0A075B638 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav4-2A0A075B638 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav4-2A0A075B638 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 77 ms