Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC15.38■□□□□ 0.05
Trav9-1A0A075B601 Etf1-202ENSMUST00000180351 108 ntBASIC15.38■□□□□ 0.05
Trav9-1A0A075B601 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Trav9-1A0A075B601 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav9-1A0A075B601 Gm9870-201ENSMUST00000063874 645 ntBASIC15.38■□□□□ 0.05
Trav9-1A0A075B601 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav9-1A0A075B601 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav9-1A0A075B601 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav9-1A0A075B601 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Trav9-1A0A075B601 Hsf1-204ENSMUST00000226872 2104 ntBASIC15.38■□□□□ 0.05
Trav9-1A0A075B601 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav9-1A0A075B601 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav9-1A0A075B601 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav9-1A0A075B601 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav9-1A0A075B601 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav9-1A0A075B601 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav9-1A0A075B601 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC15.37■□□□□ 0.05
Trav9-1A0A075B601 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav9-1A0A075B601 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav9-1A0A075B601 Gm15043-201ENSMUST00000118843 1543 ntBASIC15.37■□□□□ 0.05
Trav9-1A0A075B601 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav9-1A0A075B601 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav9-1A0A075B601 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav9-1A0A075B601 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav9-1A0A075B601 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav9-1A0A075B601 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav9-1A0A075B601 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Trav9-1A0A075B601 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav9-1A0A075B601 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav9-1A0A075B601 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC15.36■□□□□ 0.05
Trav9-1A0A075B601 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav9-1A0A075B601 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC15.36■□□□□ 0.05
Trav9-1A0A075B601 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav9-1A0A075B601 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav9-1A0A075B601 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav9-1A0A075B601 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav9-1A0A075B601 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav9-1A0A075B601 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav9-1A0A075B601 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav9-1A0A075B601 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav9-1A0A075B601 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Trav9-1A0A075B601 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC15.35■□□□□ 0.05
Trav9-1A0A075B601 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav9-1A0A075B601 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav9-1A0A075B601 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC15.35■□□□□ 0.05
Trav9-1A0A075B601 Gm6802-201ENSMUST00000167843 1983 ntBASIC15.35■□□□□ 0.05
Trav9-1A0A075B601 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC15.34■□□□□ 0.05
Trav9-1A0A075B601 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Trav9-1A0A075B601 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav9-1A0A075B601 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav9-1A0A075B601 Gm43530-201ENSMUST00000195920 274 ntBASIC15.34■□□□□ 0.05
Trav9-1A0A075B601 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav9-1A0A075B601 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Trav9-1A0A075B601 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav9-1A0A075B601 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav9-1A0A075B601 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav9-1A0A075B601 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
Trav9-1A0A075B601 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav9-1A0A075B601 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav9-1A0A075B601 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav9-1A0A075B601 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC15.34■□□□□ 0.05
Trav9-1A0A075B601 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.05
Trav9-1A0A075B601 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Trav9-1A0A075B601 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav9-1A0A075B601 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Trav9-1A0A075B601 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav9-1A0A075B601 Cdkn3-203ENSMUST00000227149 1952 ntBASIC15.33■□□□□ 0.05
Trav9-1A0A075B601 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav9-1A0A075B601 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Trav9-1A0A075B601 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC15.33■□□□□ 0.04
Trav9-1A0A075B601 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC15.33■□□□□ 0.04
Trav9-1A0A075B601 Mir6236-201ENSMUST00000184437 123 ntBASIC15.33■□□□□ 0.04
Trav9-1A0A075B601 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav9-1A0A075B601 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav9-1A0A075B601 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav9-1A0A075B601 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav9-1A0A075B601 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav9-1A0A075B601 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav9-1A0A075B601 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav9-1A0A075B601 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav9-1A0A075B601 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav9-1A0A075B601 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav9-1A0A075B601 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Trav9-1A0A075B601 Gm10657-201ENSMUST00000193528 1031 ntBASIC15.32■□□□□ 0.04
Trav9-1A0A075B601 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC15.32■□□□□ 0.04
Trav9-1A0A075B601 Gm9959-201ENSMUST00000068277 390 ntBASIC15.32■□□□□ 0.04
Trav9-1A0A075B601 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav9-1A0A075B601 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav9-1A0A075B601 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Trav9-1A0A075B601 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav9-1A0A075B601 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC15.31■□□□□ 0.04
Trav9-1A0A075B601 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
Trav9-1A0A075B601 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trav9-1A0A075B601 AC093043.1-201ENSMUST00000226700 898 ntBASIC15.31■□□□□ 0.04
Trav9-1A0A075B601 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav9-1A0A075B601 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav9-1A0A075B601 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav9-1A0A075B601 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav9-1A0A075B601 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav9-1A0A075B601 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 132.3 ms