Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav5-1A0A075B5Z7 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav5-1A0A075B5Z7 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav5-1A0A075B5Z7 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Trav5-1A0A075B5Z7 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Trav5-1A0A075B5Z7 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17■□□□□ 0.31
Trav5-1A0A075B5Z7 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Trav5-1A0A075B5Z7 Gm40848-201ENSMUST00000221998 324 ntBASIC17■□□□□ 0.31
Trav5-1A0A075B5Z7 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17■□□□□ 0.31
Trav5-1A0A075B5Z7 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav5-1A0A075B5Z7 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trav5-1A0A075B5Z7 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trav5-1A0A075B5Z7 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC16.99■□□□□ 0.31
Trav5-1A0A075B5Z7 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trav5-1A0A075B5Z7 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC16.99■□□□□ 0.31
Trav5-1A0A075B5Z7 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trav5-1A0A075B5Z7 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Trav5-1A0A075B5Z7 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Trav5-1A0A075B5Z7 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav5-1A0A075B5Z7 Gm10571-201ENSMUST00000097869 1638 ntBASIC16.99■□□□□ 0.31
Trav5-1A0A075B5Z7 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trav5-1A0A075B5Z7 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trav5-1A0A075B5Z7 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav5-1A0A075B5Z7 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav5-1A0A075B5Z7 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC16.98■□□□□ 0.31
Trav5-1A0A075B5Z7 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC16.98■□□□□ 0.31
Trav5-1A0A075B5Z7 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav5-1A0A075B5Z7 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Trav5-1A0A075B5Z7 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trav5-1A0A075B5Z7 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trav5-1A0A075B5Z7 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trav5-1A0A075B5Z7 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Trav5-1A0A075B5Z7 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC16.97■□□□□ 0.31
Trav5-1A0A075B5Z7 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav5-1A0A075B5Z7 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Trav5-1A0A075B5Z7 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav5-1A0A075B5Z7 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Trav5-1A0A075B5Z7 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav5-1A0A075B5Z7 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav5-1A0A075B5Z7 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav5-1A0A075B5Z7 Snhg20-203ENSMUST00000182811 2153 ntBASIC16.96■□□□□ 0.31
Trav5-1A0A075B5Z7 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav5-1A0A075B5Z7 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav5-1A0A075B5Z7 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav5-1A0A075B5Z7 Gm37035-201ENSMUST00000194809 2148 ntBASIC16.96■□□□□ 0.31
Trav5-1A0A075B5Z7 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC16.96■□□□□ 0.31
Trav5-1A0A075B5Z7 Gm18284-201ENSMUST00000172604 624 ntBASIC16.96■□□□□ 0.31
Trav5-1A0A075B5Z7 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC16.96■□□□□ 0.31
Trav5-1A0A075B5Z7 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav5-1A0A075B5Z7 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trav5-1A0A075B5Z7 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav5-1A0A075B5Z7 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav5-1A0A075B5Z7 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trav5-1A0A075B5Z7 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trav5-1A0A075B5Z7 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Trav5-1A0A075B5Z7 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav5-1A0A075B5Z7 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC16.95■□□□□ 0.3
Trav5-1A0A075B5Z7 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC16.95■□□□□ 0.3
Trav5-1A0A075B5Z7 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trav5-1A0A075B5Z7 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav5-1A0A075B5Z7 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Trav5-1A0A075B5Z7 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav5-1A0A075B5Z7 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav5-1A0A075B5Z7 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav5-1A0A075B5Z7 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trav5-1A0A075B5Z7 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Trav5-1A0A075B5Z7 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav5-1A0A075B5Z7 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav5-1A0A075B5Z7 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC16.94■□□□□ 0.3
Trav5-1A0A075B5Z7 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC16.94■□□□□ 0.3
Trav5-1A0A075B5Z7 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trav5-1A0A075B5Z7 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Trav5-1A0A075B5Z7 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav5-1A0A075B5Z7 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav5-1A0A075B5Z7 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC16.94■□□□□ 0.3
Trav5-1A0A075B5Z7 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav5-1A0A075B5Z7 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trav5-1A0A075B5Z7 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC16.93■□□□□ 0.3
Trav5-1A0A075B5Z7 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav5-1A0A075B5Z7 Gm8495-201ENSMUST00000188740 694 ntBASIC16.93■□□□□ 0.3
Trav5-1A0A075B5Z7 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC16.93■□□□□ 0.3
Trav5-1A0A075B5Z7 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav5-1A0A075B5Z7 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
Trav5-1A0A075B5Z7 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trav5-1A0A075B5Z7 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trav5-1A0A075B5Z7 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav5-1A0A075B5Z7 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC16.93■□□□□ 0.3
Trav5-1A0A075B5Z7 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav5-1A0A075B5Z7 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trav5-1A0A075B5Z7 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Trav5-1A0A075B5Z7 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trav5-1A0A075B5Z7 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trav5-1A0A075B5Z7 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav5-1A0A075B5Z7 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav5-1A0A075B5Z7 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trav5-1A0A075B5Z7 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trav5-1A0A075B5Z7 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav5-1A0A075B5Z7 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav5-1A0A075B5Z7 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav5-1A0A075B5Z7 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms