Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm8083-201ENSMUST00000203976 475 ntBASIC9.66□□□□□ -0.86
Clrn1Q8K445 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC9.66□□□□□ -0.86
Clrn1Q8K445 Gm3926-201ENSMUST00000223378 1123 ntBASIC9.66□□□□□ -0.86
Clrn1Q8K445 Zdhhc9-201ENSMUST00000037960 2982 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Clrn1Q8K445 Ccl27a-201ENSMUST00000074387 405 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Clrn1Q8K445 A430093F15Rik-201ENSMUST00000087947 985 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Clrn1Q8K445 Gm10238-201ENSMUST00000089689 408 ntBASIC9.66□□□□□ -0.86
Clrn1Q8K445 Atxn7l1-203ENSMUST00000110824 1675 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Clrn1Q8K445 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Clrn1Q8K445 Loxl4-201ENSMUST00000026190 3738 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Clrn1Q8K445 Cnga4-201ENSMUST00000033187 2484 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Clrn1Q8K445 Myo5a-206ENSMUST00000136731 6480 ntAPPRIS ALT1 TSL 5 BASIC9.66□□□□□ -0.86
Clrn1Q8K445 Edil3-201ENSMUST00000043111 5156 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Clrn1Q8K445 Il10ra-202ENSMUST00000176222 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Clrn1Q8K445 L1cam-203ENSMUST00000114430 5126 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Clrn1Q8K445 Gm45867-201ENSMUST00000208201 2317 ntBASIC9.66□□□□□ -0.86
Clrn1Q8K445 Zzef1-207ENSMUST00000172220 11249 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Clrn1Q8K445 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Clrn1Q8K445 Dnm2-202ENSMUST00000091087 3450 ntAPPRIS ALT1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Clrn1Q8K445 Gm26527-201ENSMUST00000180416 1948 ntTSL 5 BASIC9.66□□□□□ -0.86
Clrn1Q8K445 Gm10603-201ENSMUST00000183512 2279 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Clrn1Q8K445 Pde4d-202ENSMUST00000079975 2280 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Clrn1Q8K445 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Clrn1Q8K445 Gm20953-201ENSMUST00000216399 2614 ntBASIC9.66□□□□□ -0.86
Clrn1Q8K445 Arhgap21-208ENSMUST00000141298 6339 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Clrn1Q8K445 Dock4-204ENSMUST00000220912 7360 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Clrn1Q8K445 Gpr75-201ENSMUST00000109430 2926 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Clrn1Q8K445 Tktl2-202ENSMUST00000183187 5485 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Clrn1Q8K445 Gm26670-201ENSMUST00000180429 3287 ntBASIC9.65□□□□□ -0.86
Clrn1Q8K445 St6galnac4-201ENSMUST00000102818 3626 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Clrn1Q8K445 Ly9-203ENSMUST00000111277 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Clrn1Q8K445 Bcl9-207ENSMUST00000166341 4652 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Clrn1Q8K445 Tmem87a-201ENSMUST00000090042 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Clrn1Q8K445 Gm7061-201ENSMUST00000118127 1416 ntBASIC9.65□□□□□ -0.86
Clrn1Q8K445 Il7-204ENSMUST00000194184 1785 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Clrn1Q8K445 Heatr6-201ENSMUST00000001002 5614 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Clrn1Q8K445 Gm42970-201ENSMUST00000196407 1352 ntBASIC9.65□□□□□ -0.86
Clrn1Q8K445 Thsd7a-206ENSMUST00000172356 10998 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Clrn1Q8K445 Tnfrsf8-201ENSMUST00000030339 3414 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Clrn1Q8K445 Olfr1156-202ENSMUST00000216191 3300 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Clrn1Q8K445 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Clrn1Q8K445 Csnk2a1-201ENSMUST00000099224 4206 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Clrn1Q8K445 Polh-201ENSMUST00000024749 2569 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Clrn1Q8K445 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Clrn1Q8K445 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC9.65□□□□□ -0.86
Clrn1Q8K445 Gm23745-201ENSMUST00000104230 125 ntBASIC9.65□□□□□ -0.86
Clrn1Q8K445 Pdzk1ip1-202ENSMUST00000106548 887 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Clrn1Q8K445 Gstm6-204ENSMUST00000106684 1179 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Clrn1Q8K445 Gm14326-203ENSMUST00000108932 888 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Clrn1Q8K445 Mir1249-201ENSMUST00000116791 98 ntBASIC9.65□□□□□ -0.86
Clrn1Q8K445 Gm11801-201ENSMUST00000117807 746 ntBASIC9.65□□□□□ -0.86
Clrn1Q8K445 Gm5510-201ENSMUST00000117826 486 ntBASIC9.65□□□□□ -0.86
Clrn1Q8K445 Gm16581-201ENSMUST00000160730 991 ntBASIC9.65□□□□□ -0.86
Clrn1Q8K445 Vmn2r-ps13-201ENSMUST00000176920 606 ntBASIC9.65□□□□□ -0.86
Clrn1Q8K445 Gm3115-202ENSMUST00000177660 618 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Clrn1Q8K445 Gm6337-203ENSMUST00000177662 618 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Clrn1Q8K445 Gm3727-202ENSMUST00000178251 618 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Clrn1Q8K445 Gm16973-201ENSMUST00000180682 1299 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Clrn1Q8K445 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Clrn1Q8K445 Wbp1-209ENSMUST00000205023 716 ntBASIC9.65□□□□□ -0.86
Clrn1Q8K445 Chac2-201ENSMUST00000020553 1018 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Clrn1Q8K445 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC9.65□□□□□ -0.86
Clrn1Q8K445 AC174797.2-201ENSMUST00000225835 165 ntBASIC9.65□□□□□ -0.86
Clrn1Q8K445 AC156016.4-201ENSMUST00000227470 647 ntBASIC9.65□□□□□ -0.86
Clrn1Q8K445 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Clrn1Q8K445 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Clrn1Q8K445 Tpm3-204ENSMUST00000119570 2233 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Clrn1Q8K445 Cux1-207ENSMUST00000176216 2821 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Clrn1Q8K445 Pard3-201ENSMUST00000026921 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Clrn1Q8K445 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Clrn1Q8K445 9630001P10Rik-201ENSMUST00000181083 2799 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Clrn1Q8K445 Gm5099-201ENSMUST00000194892 1848 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Clrn1Q8K445 2210010C04Rik-201ENSMUST00000031931 2142 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Clrn1Q8K445 Rapgef6-203ENSMUST00000102743 8189 ntAPPRIS P3 TSL 5 BASIC9.65□□□□□ -0.86
Clrn1Q8K445 Adam22-204ENSMUST00000088761 9077 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Clrn1Q8K445 Rreb1-207ENSMUST00000128570 8436 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.87
Clrn1Q8K445 Gm38199-201ENSMUST00000192013 3277 ntBASIC9.65□□□□□ -0.87
Clrn1Q8K445 Gm42971-201ENSMUST00000199228 2079 ntBASIC9.65□□□□□ -0.87
Clrn1Q8K445 B4galt4-204ENSMUST00000114711 1481 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Clrn1Q8K445 Efna1-201ENSMUST00000029566 1480 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Clrn1Q8K445 Acnat1-201ENSMUST00000095086 1499 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Clrn1Q8K445 Zfyve26-201ENSMUST00000021547 9391 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Clrn1Q8K445 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.87
Clrn1Q8K445 Bpifb2-201ENSMUST00000028983 1730 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Clrn1Q8K445 Sema4g-203ENSMUST00000179305 4290 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Clrn1Q8K445 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Clrn1Q8K445 Gm10093-201ENSMUST00000079363 1977 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Clrn1Q8K445 Tbp-203ENSMUST00000118001 1652 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Clrn1Q8K445 Rnf38-201ENSMUST00000045793 5012 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Clrn1Q8K445 Gm26818-201ENSMUST00000181367 1360 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Clrn1Q8K445 1700048O20Rik-202ENSMUST00000214777 1900 ntTSL 3 BASIC9.64□□□□□ -0.87
Clrn1Q8K445 Shcbp1-201ENSMUST00000022945 2156 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Clrn1Q8K445 Pigq-218ENSMUST00000208043 2987 ntAPPRIS P3 TSL 5 BASIC9.64□□□□□ -0.87
Clrn1Q8K445 Dync1h1-201ENSMUST00000018851 14342 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Clrn1Q8K445 Samsn1-201ENSMUST00000114239 1890 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Clrn1Q8K445 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Clrn1Q8K445 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Clrn1Q8K445 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Clrn1Q8K445 Klf3-202ENSMUST00000166409 1562 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Clrn1Q8K445 Tomm40l-201ENSMUST00000005817 4712 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms