Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Il18bp-202ENSMUST00000209368 2596 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vps54Q5SPW0 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Vps54Q5SPW0 Gm14858-201ENSMUST00000138614 1758 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Vps54Q5SPW0 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Vps54Q5SPW0 Traip-201ENSMUST00000049348 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vps54Q5SPW0 Zfp264-202ENSMUST00000208781 2801 ntTSL 5 BASIC12.25□□□□□ -0.45
Vps54Q5SPW0 Sept9-204ENSMUST00000106349 2932 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vps54Q5SPW0 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Vps54Q5SPW0 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vps54Q5SPW0 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vps54Q5SPW0 Tie1-203ENSMUST00000184261 4234 ntTSL 2 BASIC12.25□□□□□ -0.45
Vps54Q5SPW0 Calr4-204ENSMUST00000106631 2155 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Vps54Q5SPW0 Arhgap10-203ENSMUST00000210922 2208 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Vps54Q5SPW0 Zc3h18-202ENSMUST00000093073 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vps54Q5SPW0 Gm11569-201ENSMUST00000105057 869 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Vps54Q5SPW0 Gm14639-201ENSMUST00000120850 866 ntBASIC12.25□□□□□ -0.45
Vps54Q5SPW0 Gm14055-201ENSMUST00000130262 668 ntTSL 5 BASIC12.25□□□□□ -0.45
Vps54Q5SPW0 4930529I22Rik-201ENSMUST00000131509 589 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Vps54Q5SPW0 Gm15650-201ENSMUST00000135451 770 ntTSL 3 BASIC12.25□□□□□ -0.45
Vps54Q5SPW0 Gm3687-201ENSMUST00000161710 460 ntBASIC12.25□□□□□ -0.45
Vps54Q5SPW0 Gm7924-201ENSMUST00000203975 785 ntBASIC12.25□□□□□ -0.45
Vps54Q5SPW0 Gm5040-201ENSMUST00000218609 800 ntBASIC12.25□□□□□ -0.45
Vps54Q5SPW0 AC159282.1-204ENSMUST00000219472 780 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Vps54Q5SPW0 Ccdc33-204ENSMUST00000119665 2552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vps54Q5SPW0 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vps54Q5SPW0 Nadsyn1-201ENSMUST00000033415 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vps54Q5SPW0 Plxna3-201ENSMUST00000004326 6943 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vps54Q5SPW0 Gm13608-201ENSMUST00000121807 1406 ntBASIC12.25□□□□□ -0.45
Vps54Q5SPW0 H2-M10.4-201ENSMUST00000057502 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vps54Q5SPW0 CT010575.1-201ENSMUST00000220666 2924 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Vps54Q5SPW0 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vps54Q5SPW0 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
Vps54Q5SPW0 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC12.25□□□□□ -0.45
Vps54Q5SPW0 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vps54Q5SPW0 Supt20-ps-201ENSMUST00000117999 1560 ntBASIC12.25□□□□□ -0.45
Vps54Q5SPW0 Exoc7-203ENSMUST00000106413 3298 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
Vps54Q5SPW0 D030028A08Rik-202ENSMUST00000131501 3542 ntTSL 2 BASIC12.25□□□□□ -0.45
Vps54Q5SPW0 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vps54Q5SPW0 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vps54Q5SPW0 2900011O08Rik-201ENSMUST00000056521 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vps54Q5SPW0 Pde4d-209ENSMUST00000122041 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vps54Q5SPW0 4932442E05Rik-201ENSMUST00000191892 2717 ntBASIC12.24□□□□□ -0.45
Vps54Q5SPW0 Mdm1-203ENSMUST00000164077 2922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vps54Q5SPW0 Gm26670-201ENSMUST00000180429 3287 ntBASIC12.24□□□□□ -0.45
Vps54Q5SPW0 Sncaip-201ENSMUST00000025413 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vps54Q5SPW0 Padi1-201ENSMUST00000026378 3754 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vps54Q5SPW0 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vps54Q5SPW0 BC017643-202ENSMUST00000106115 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vps54Q5SPW0 0610037L13Rik-203ENSMUST00000106726 515 ntTSL 5 BASIC12.24□□□□□ -0.45
Vps54Q5SPW0 Ly9-203ENSMUST00000111277 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vps54Q5SPW0 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Vps54Q5SPW0 Rfx6-202ENSMUST00000122922 3464 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Vps54Q5SPW0 2310065F04Rik-201ENSMUST00000125538 2724 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Vps54Q5SPW0 1700112K13Rik-201ENSMUST00000141892 701 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Vps54Q5SPW0 Tmem63c-203ENSMUST00000146292 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vps54Q5SPW0 Optc-204ENSMUST00000149380 1180 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Vps54Q5SPW0 Gm23675-201ENSMUST00000157311 125 ntBASIC12.24□□□□□ -0.45
Vps54Q5SPW0 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vps54Q5SPW0 Tex33-203ENSMUST00000169575 942 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Vps54Q5SPW0 Gm24368-201ENSMUST00000175388 106 ntBASIC12.24□□□□□ -0.45
Vps54Q5SPW0 Gm21817-201ENSMUST00000178584 2583 ntBASIC12.24□□□□□ -0.45
Vps54Q5SPW0 Gm7833-201ENSMUST00000183288 990 ntBASIC12.24□□□□□ -0.45
Vps54Q5SPW0 Gm6124-201ENSMUST00000188240 2580 ntBASIC12.24□□□□□ -0.45
Vps54Q5SPW0 G6pc-201ENSMUST00000019469 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vps54Q5SPW0 Gm42962-201ENSMUST00000201966 2325 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Vps54Q5SPW0 1700012J15Rik-201ENSMUST00000203458 471 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Vps54Q5SPW0 Pigq-218ENSMUST00000208043 2987 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
Vps54Q5SPW0 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Vps54Q5SPW0 Gm44953-201ENSMUST00000208745 1286 ntBASIC12.24□□□□□ -0.45
Vps54Q5SPW0 Pigx-212ENSMUST00000215073 765 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vps54Q5SPW0 AC153370.2-201ENSMUST00000217920 3093 ntTSL 5 BASIC12.24□□□□□ -0.45
Vps54Q5SPW0 Zfp131-203ENSMUST00000223722 3109 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
Vps54Q5SPW0 AC163638.2-201ENSMUST00000224920 827 ntBASIC12.24□□□□□ -0.45
Vps54Q5SPW0 Gm8256-202ENSMUST00000227964 828 ntBASIC12.24□□□□□ -0.45
Vps54Q5SPW0 AC107711.3-201ENSMUST00000228939 1035 ntBASIC12.24□□□□□ -0.45
Vps54Q5SPW0 Klk1b24-201ENSMUST00000073713 878 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vps54Q5SPW0 Klk1b21-201ENSMUST00000085455 871 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vps54Q5SPW0 Speer4c-201ENSMUST00000095005 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vps54Q5SPW0 Speer4d-201ENSMUST00000095006 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vps54Q5SPW0 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vps54Q5SPW0 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Vps54Q5SPW0 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vps54Q5SPW0 Clcn6-205ENSMUST00000137724 5198 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
Vps54Q5SPW0 Kansl1-201ENSMUST00000018556 5061 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vps54Q5SPW0 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vps54Q5SPW0 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vps54Q5SPW0 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps54Q5SPW0 Gm45867-201ENSMUST00000208201 2317 ntBASIC12.23□□□□□ -0.45
Vps54Q5SPW0 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Vps54Q5SPW0 AC117245.3-201ENSMUST00000217495 2176 ntBASIC12.23□□□□□ -0.45
Vps54Q5SPW0 Gm26953-209ENSMUST00000213051 2087 ntTSL 5 BASIC12.23□□□□□ -0.45
Vps54Q5SPW0 Pik3r3-202ENSMUST00000106490 1830 ntTSL 5 BASIC12.23□□□□□ -0.45
Vps54Q5SPW0 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps54Q5SPW0 Pdgfd-202ENSMUST00000168039 1795 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps54Q5SPW0 Mepe-201ENSMUST00000066207 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps54Q5SPW0 Gm42735-201ENSMUST00000201718 1646 ntBASIC12.23□□□□□ -0.45
Vps54Q5SPW0 Gm5174-201ENSMUST00000171131 1423 ntBASIC12.23□□□□□ -0.45
Vps54Q5SPW0 Slc35a4-206ENSMUST00000186538 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps54Q5SPW0 Itpa-201ENSMUST00000103193 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps54Q5SPW0 Il1f5-205ENSMUST00000147885 1392 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 721.7 ms