Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Gm43984-201ENSMUST00000204572 2864 ntBASIC9.45□□□□□ -0.9
Spg11Q3UHA3 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC9.45□□□□□ -0.9
Spg11Q3UHA3 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Spg11Q3UHA3 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Spg11Q3UHA3 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Spg11Q3UHA3 4933408N05Rik-201ENSMUST00000139864 1584 ntTSL 5 BASIC9.44□□□□□ -0.9
Spg11Q3UHA3 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Spg11Q3UHA3 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC9.44□□□□□ -0.9
Spg11Q3UHA3 Adgrv1-214ENSMUST00000224088 1492 ntBASIC9.44□□□□□ -0.9
Spg11Q3UHA3 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Spg11Q3UHA3 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Spg11Q3UHA3 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Spg11Q3UHA3 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Spg11Q3UHA3 Trdv2-1-201ENSMUST00000103677 345 ntAPPRIS ALT2 BASIC9.44□□□□□ -0.9
Spg11Q3UHA3 Magea7-ps-201ENSMUST00000117727 960 ntBASIC9.44□□□□□ -0.9
Spg11Q3UHA3 Gm13160-201ENSMUST00000118441 627 ntBASIC9.44□□□□□ -0.9
Spg11Q3UHA3 Snca-202ENSMUST00000163779 1188 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Spg11Q3UHA3 Gm20406-201ENSMUST00000173993 423 ntTSL 3 BASIC9.44□□□□□ -0.9
Spg11Q3UHA3 Gm25736-201ENSMUST00000175165 101 ntBASIC9.44□□□□□ -0.9
Spg11Q3UHA3 Celrr-201ENSMUST00000181183 1194 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Spg11Q3UHA3 Gm30692-201ENSMUST00000208709 801 ntTSL 5 BASIC9.44□□□□□ -0.9
Spg11Q3UHA3 AC154766.1-201ENSMUST00000226550 936 ntBASIC9.44□□□□□ -0.9
Spg11Q3UHA3 AC142114.1-201ENSMUST00000227724 328 ntBASIC9.44□□□□□ -0.9
Spg11Q3UHA3 Mir195a-201ENSMUST00000083477 94 ntBASIC9.44□□□□□ -0.9
Spg11Q3UHA3 CK137956-201ENSMUST00000030614 2319 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Spg11Q3UHA3 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Spg11Q3UHA3 Sdc2-201ENSMUST00000022871 3527 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Spg11Q3UHA3 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Spg11Q3UHA3 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Spg11Q3UHA3 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Spg11Q3UHA3 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC9.44□□□□□ -0.9
Spg11Q3UHA3 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Spg11Q3UHA3 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Spg11Q3UHA3 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Spg11Q3UHA3 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Spg11Q3UHA3 St6galnac2-206ENSMUST00000144398 1683 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Spg11Q3UHA3 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Spg11Q3UHA3 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Spg11Q3UHA3 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Spg11Q3UHA3 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Spg11Q3UHA3 Wdr20rt-202ENSMUST00000221658 1570 ntTSL 5 BASIC9.44□□□□□ -0.9
Spg11Q3UHA3 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Spg11Q3UHA3 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Spg11Q3UHA3 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Spg11Q3UHA3 Pgbd5-206ENSMUST00000172566 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Spg11Q3UHA3 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Spg11Q3UHA3 Cxcr2-201ENSMUST00000027372 2220 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Spg11Q3UHA3 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Spg11Q3UHA3 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Spg11Q3UHA3 Il15ra-205ENSMUST00000114833 1607 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Spg11Q3UHA3 Olfr450-202ENSMUST00000218832 1899 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Spg11Q3UHA3 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Spg11Q3UHA3 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Spg11Q3UHA3 Gm16518-201ENSMUST00000117960 508 ntBASIC9.44□□□□□ -0.9
Spg11Q3UHA3 Rps16-ps2-201ENSMUST00000140155 441 ntBASIC9.44□□□□□ -0.9
Spg11Q3UHA3 Gm22881-201ENSMUST00000157747 134 ntBASIC9.44□□□□□ -0.9
Spg11Q3UHA3 Ccr6-204ENSMUST00000167956 1219 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Spg11Q3UHA3 Cldn20-201ENSMUST00000168560 660 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Spg11Q3UHA3 Gm6723-201ENSMUST00000180449 441 ntBASIC9.44□□□□□ -0.9
Spg11Q3UHA3 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC9.44□□□□□ -0.9
Spg11Q3UHA3 Gm29323-201ENSMUST00000189792 332 ntTSL 3 BASIC9.44□□□□□ -0.9
Spg11Q3UHA3 Gm23604-202ENSMUST00000198428 137 ntBASIC9.44□□□□□ -0.9
Spg11Q3UHA3 Sftpc-201ENSMUST00000022692 792 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Spg11Q3UHA3 CT025535.1-202ENSMUST00000228291 241 ntBASIC9.44□□□□□ -0.9
Spg11Q3UHA3 Wdr66-201ENSMUST00000069311 978 ntTSL 5 BASIC9.44□□□□□ -0.9
Spg11Q3UHA3 Brd9-206ENSMUST00000222399 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Spg11Q3UHA3 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Spg11Q3UHA3 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Spg11Q3UHA3 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Spg11Q3UHA3 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC9.44□□□□□ -0.9
Spg11Q3UHA3 Zfp410-203ENSMUST00000220931 1569 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Spg11Q3UHA3 Lyz2-201ENSMUST00000092163 1316 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Spg11Q3UHA3 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Spg11Q3UHA3 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Spg11Q3UHA3 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Spg11Q3UHA3 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Spg11Q3UHA3 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC9.43□□□□□ -0.9
Spg11Q3UHA3 Ctsa-201ENSMUST00000017904 3674 ntAPPRIS P4 TSL 5 BASIC9.43□□□□□ -0.9
Spg11Q3UHA3 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC9.43□□□□□ -0.9
Spg11Q3UHA3 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Spg11Q3UHA3 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Spg11Q3UHA3 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Spg11Q3UHA3 Pla2g2d-202ENSMUST00000105806 1206 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Spg11Q3UHA3 Dcpp3-201ENSMUST00000115428 610 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
Spg11Q3UHA3 Gm22915-201ENSMUST00000157615 136 ntBASIC9.43□□□□□ -0.9
Spg11Q3UHA3 Kank3-204ENSMUST00000173789 783 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Spg11Q3UHA3 Gm8907-201ENSMUST00000182240 1003 ntBASIC9.43□□□□□ -0.9
Spg11Q3UHA3 Gm44306-201ENSMUST00000203058 203 ntBASIC9.43□□□□□ -0.9
Spg11Q3UHA3 Gm31579-201ENSMUST00000203306 966 ntBASIC9.43□□□□□ -0.9
Spg11Q3UHA3 AC153845.1-201ENSMUST00000213596 428 ntBASIC9.43□□□□□ -0.9
Spg11Q3UHA3 CT010462.1-201ENSMUST00000220554 1200 ntTSL 5 BASIC9.43□□□□□ -0.9
Spg11Q3UHA3 AC165159.1-201ENSMUST00000223825 631 ntBASIC9.43□□□□□ -0.9
Spg11Q3UHA3 Olfr132-201ENSMUST00000087128 942 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Spg11Q3UHA3 Cbx1-203ENSMUST00000093943 1251 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Spg11Q3UHA3 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Spg11Q3UHA3 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Spg11Q3UHA3 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Spg11Q3UHA3 AC135083.1-201ENSMUST00000227773 1331 ntBASIC9.43□□□□□ -0.9
Spg11Q3UHA3 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Spg11Q3UHA3 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms