Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cdx2P43241 9530059O14Rik-201ENSMUST00000181107 3978 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Cdx2P43241 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Cdx2P43241 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Cdx2P43241 Cage1-203ENSMUST00000110233 2875 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Cdx2P43241 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cdx2P43241 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cdx2P43241 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Cdx2P43241 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Cdx2P43241 Cfb-201ENSMUST00000025229 2737 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cdx2P43241 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Cdx2P43241 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Cdx2P43241 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC9.75□□□□□ -0.85
Cdx2P43241 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cdx2P43241 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC9.75□□□□□ -0.85
Cdx2P43241 Atxn1l-202ENSMUST00000212605 7439 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cdx2P43241 Vps45-201ENSMUST00000015891 2637 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cdx2P43241 Tmem29-201ENSMUST00000059256 1402 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cdx2P43241 Pex26-203ENSMUST00000120066 3861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cdx2P43241 Rangap1-203ENSMUST00000171115 2740 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cdx2P43241 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cdx2P43241 Gm436-201ENSMUST00000105747 1224 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Cdx2P43241 Gm8661-201ENSMUST00000118688 992 ntBASIC9.75□□□□□ -0.85
Cdx2P43241 Gm7180-201ENSMUST00000121753 513 ntBASIC9.75□□□□□ -0.85
Cdx2P43241 Gm22009-201ENSMUST00000158792 343 ntBASIC9.75□□□□□ -0.85
Cdx2P43241 Gm9578-201ENSMUST00000182354 753 ntBASIC9.75□□□□□ -0.85
Cdx2P43241 4933436E23Rik-201ENSMUST00000192824 1111 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Cdx2P43241 Gm43103-201ENSMUST00000199021 802 ntBASIC9.75□□□□□ -0.85
Cdx2P43241 Gm20186-203ENSMUST00000202542 741 ntTSL 3 BASIC9.75□□□□□ -0.85
Cdx2P43241 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cdx2P43241 Hbq1a-201ENSMUST00000020535 604 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cdx2P43241 Pttg1-201ENSMUST00000020685 634 ntTSL 2 BASIC9.75□□□□□ -0.85
Cdx2P43241 Gm3635-201ENSMUST00000212314 354 ntBASIC9.75□□□□□ -0.85
Cdx2P43241 CT025603.2-201ENSMUST00000224369 484 ntBASIC9.75□□□□□ -0.85
Cdx2P43241 AC093022.2-202ENSMUST00000227500 866 ntBASIC9.75□□□□□ -0.85
Cdx2P43241 Tmem89-201ENSMUST00000026744 538 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cdx2P43241 3110009E18Rik-201ENSMUST00000027637 1007 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Cdx2P43241 Gm10053-201ENSMUST00000073080 949 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Cdx2P43241 1810009J06Rik-201ENSMUST00000076638 882 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cdx2P43241 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cdx2P43241 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cdx2P43241 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC9.75□□□□□ -0.85
Cdx2P43241 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cdx2P43241 Gm5310-201ENSMUST00000197861 1511 ntBASIC9.75□□□□□ -0.85
Cdx2P43241 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cdx2P43241 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cdx2P43241 Gm42463-201ENSMUST00000198041 4886 ntBASIC9.75□□□□□ -0.85
Cdx2P43241 Slc17a3-203ENSMUST00000110422 1764 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Cdx2P43241 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cdx2P43241 Olfr1349-206ENSMUST00000213656 4492 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Cdx2P43241 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Cdx2P43241 5730403I07Rik-201ENSMUST00000183878 2033 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Cdx2P43241 Gm8016-201ENSMUST00000221830 1575 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Cdx2P43241 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC9.75□□□□□ -0.85
Cdx2P43241 Sf3a3-201ENSMUST00000030734 1820 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cdx2P43241 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC9.75□□□□□ -0.85
Cdx2P43241 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Cdx2P43241 Sdcbp2-201ENSMUST00000028950 1399 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cdx2P43241 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Cdx2P43241 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cdx2P43241 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Cdx2P43241 CT009713.5-203ENSMUST00000224218 2079 ntBASIC9.75□□□□□ -0.85
Cdx2P43241 Tmem106a-201ENSMUST00000039581 2304 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cdx2P43241 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Cdx2P43241 Gm2128-201ENSMUST00000108009 2560 ntBASIC9.74□□□□□ -0.85
Cdx2P43241 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cdx2P43241 Phf8-202ENSMUST00000046962 3105 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cdx2P43241 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cdx2P43241 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cdx2P43241 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cdx2P43241 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Cdx2P43241 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Cdx2P43241 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cdx2P43241 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Cdx2P43241 Il7-204ENSMUST00000194184 1785 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Cdx2P43241 Spz1-201ENSMUST00000050658 1537 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Cdx2P43241 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Cdx2P43241 Ighv2-2-201ENSMUST00000103443 352 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Cdx2P43241 Rgs8-205ENSMUST00000111815 765 ntTSL 5 BASIC9.74□□□□□ -0.85
Cdx2P43241 Gm6141-201ENSMUST00000117181 695 ntBASIC9.74□□□□□ -0.85
Cdx2P43241 Gm13551-201ENSMUST00000121286 430 ntBASIC9.74□□□□□ -0.85
Cdx2P43241 Tsc22d3-204ENSMUST00000123898 952 ntTSL 5 BASIC9.74□□□□□ -0.85
Cdx2P43241 4933438A12Rik-201ENSMUST00000144579 1013 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Cdx2P43241 Pcsk2os1-202ENSMUST00000156780 527 ntTSL 3 BASIC9.74□□□□□ -0.85
Cdx2P43241 A730090N16Rik-201ENSMUST00000160137 627 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Cdx2P43241 Ctdp1-203ENSMUST00000161003 1199 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Cdx2P43241 Gm16280-201ENSMUST00000162458 623 ntTSL 3 BASIC9.74□□□□□ -0.85
Cdx2P43241 Sfta2-201ENSMUST00000171166 508 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cdx2P43241 Gm20629-201ENSMUST00000176157 513 ntTSL 3 BASIC9.74□□□□□ -0.85
Cdx2P43241 A630023A22Rik-201ENSMUST00000178958 1277 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cdx2P43241 Gm24466-201ENSMUST00000179978 109 ntBASIC9.74□□□□□ -0.85
Cdx2P43241 Atp5h-208ENSMUST00000180072 486 ntAPPRIS P1 TSL 2 BASIC9.74□□□□□ -0.85
Cdx2P43241 Gm17764-201ENSMUST00000185925 391 ntBASIC9.74□□□□□ -0.85
Cdx2P43241 Fam162b-201ENSMUST00000020064 646 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cdx2P43241 Snrp1c-ps1-201ENSMUST00000205464 474 ntBASIC9.74□□□□□ -0.85
Cdx2P43241 Gm44978-201ENSMUST00000206635 317 ntBASIC9.74□□□□□ -0.85
Cdx2P43241 Gm44700-201ENSMUST00000208228 846 ntTSL 3 BASIC9.74□□□□□ -0.85
Cdx2P43241 Gm5905-201ENSMUST00000211731 580 ntBASIC9.74□□□□□ -0.85
Cdx2P43241 Gm39348-201ENSMUST00000216861 640 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Cdx2P43241 Olfr1115-201ENSMUST00000081986 1102 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms