Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 AC102352.1-201ENSMUST00000224187 582 ntBASIC10.03□□□□□ -0.8
Otud1Q9CUB6 AC174797.2-201ENSMUST00000225835 165 ntBASIC10.03□□□□□ -0.8
Otud1Q9CUB6 Vmn1r39-202ENSMUST00000226783 918 ntAPPRIS P2 BASIC10.03□□□□□ -0.8
Otud1Q9CUB6 AC115357.1-201ENSMUST00000227575 466 ntBASIC10.03□□□□□ -0.8
Otud1Q9CUB6 AC161172.1-201ENSMUST00000227801 486 ntBASIC10.03□□□□□ -0.8
Otud1Q9CUB6 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
Otud1Q9CUB6 Ttc24-202ENSMUST00000064550 671 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Otud1Q9CUB6 Zfp626-201ENSMUST00000080175 816 ntTSL 5 BASIC10.03□□□□□ -0.8
Otud1Q9CUB6 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Otud1Q9CUB6 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Otud1Q9CUB6 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Otud1Q9CUB6 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Otud1Q9CUB6 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Otud1Q9CUB6 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC10.03□□□□□ -0.8
Otud1Q9CUB6 Prkd3-204ENSMUST00000119284 4743 ntAPPRIS ALT1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Otud1Q9CUB6 Gm38195-201ENSMUST00000194247 1499 ntBASIC10.03□□□□□ -0.8
Otud1Q9CUB6 Lilrb4a-201ENSMUST00000217706 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Otud1Q9CUB6 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Otud1Q9CUB6 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Otud1Q9CUB6 Gm10699-201ENSMUST00000098916 2130 ntBASIC10.03□□□□□ -0.8
Otud1Q9CUB6 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC10.03□□□□□ -0.8
Otud1Q9CUB6 Ptbp3-201ENSMUST00000030076 6855 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Otud1Q9CUB6 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Otud1Q9CUB6 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Otud1Q9CUB6 Slc6a20b-201ENSMUST00000026273 6307 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Otud1Q9CUB6 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Otud1Q9CUB6 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.8
Otud1Q9CUB6 Bcl2l1-206ENSMUST00000140436 1865 ntTSL 2 BASIC10.02□□□□□ -0.8
Otud1Q9CUB6 Celf2-224ENSMUST00000182879 2223 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Otud1Q9CUB6 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Otud1Q9CUB6 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Otud1Q9CUB6 Gm43221-201ENSMUST00000197612 2071 ntBASIC10.02□□□□□ -0.81
Otud1Q9CUB6 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Otud1Q9CUB6 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Otud1Q9CUB6 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Otud1Q9CUB6 Gm12097-201ENSMUST00000121523 1414 ntBASIC10.02□□□□□ -0.81
Otud1Q9CUB6 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Otud1Q9CUB6 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC10.02□□□□□ -0.81
Otud1Q9CUB6 Gm23745-201ENSMUST00000104230 125 ntBASIC10.02□□□□□ -0.81
Otud1Q9CUB6 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Otud1Q9CUB6 Gm14906-201ENSMUST00000119265 390 ntBASIC10.02□□□□□ -0.81
Otud1Q9CUB6 Gm5909-201ENSMUST00000119768 1281 ntBASIC10.02□□□□□ -0.81
Otud1Q9CUB6 Gm13341-201ENSMUST00000120780 672 ntBASIC10.02□□□□□ -0.81
Otud1Q9CUB6 Olfr1372-ps1-201ENSMUST00000121007 934 ntBASIC10.02□□□□□ -0.81
Otud1Q9CUB6 Gm13688-201ENSMUST00000121557 608 ntBASIC10.02□□□□□ -0.81
Otud1Q9CUB6 Mir1896-201ENSMUST00000122641 81 ntBASIC10.02□□□□□ -0.81
Otud1Q9CUB6 Gm13844-201ENSMUST00000134541 581 ntTSL 3 BASIC10.02□□□□□ -0.81
Otud1Q9CUB6 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Otud1Q9CUB6 Gm16322-202ENSMUST00000141275 700 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Otud1Q9CUB6 Gm15258-201ENSMUST00000153801 741 ntBASIC10.02□□□□□ -0.81
Otud1Q9CUB6 Gm10012-202ENSMUST00000170379 372 ntBASIC10.02□□□□□ -0.81
Otud1Q9CUB6 Mir6923-201ENSMUST00000184592 72 ntBASIC10.02□□□□□ -0.81
Otud1Q9CUB6 Gm28065-201ENSMUST00000185290 833 ntTSL 3 BASIC10.02□□□□□ -0.81
Otud1Q9CUB6 Gm37362-201ENSMUST00000194567 634 ntTSL 5 BASIC10.02□□□□□ -0.81
Otud1Q9CUB6 Gm37782-201ENSMUST00000194879 678 ntBASIC10.02□□□□□ -0.81
Otud1Q9CUB6 Gm43547-201ENSMUST00000197729 328 ntBASIC10.02□□□□□ -0.81
Otud1Q9CUB6 Gm5717-201ENSMUST00000198243 1062 ntBASIC10.02□□□□□ -0.81
Otud1Q9CUB6 Gm19566-201ENSMUST00000199576 610 ntBASIC10.02□□□□□ -0.81
Otud1Q9CUB6 Gm42803-201ENSMUST00000201051 451 ntBASIC10.02□□□□□ -0.81
Otud1Q9CUB6 Gm44415-201ENSMUST00000204151 2112 ntBASIC10.02□□□□□ -0.81
Otud1Q9CUB6 Gm5881-201ENSMUST00000204737 367 ntBASIC10.02□□□□□ -0.81
Otud1Q9CUB6 Wbp1-209ENSMUST00000205023 716 ntBASIC10.02□□□□□ -0.81
Otud1Q9CUB6 Gm45893-201ENSMUST00000211899 247 ntBASIC10.02□□□□□ -0.81
Otud1Q9CUB6 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Otud1Q9CUB6 Gm3791-201ENSMUST00000220790 768 ntBASIC10.02□□□□□ -0.81
Otud1Q9CUB6 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC10.02□□□□□ -0.81
Otud1Q9CUB6 Scgb1c1-201ENSMUST00000035300 455 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
Otud1Q9CUB6 Gm10238-201ENSMUST00000089689 408 ntBASIC10.02□□□□□ -0.81
Otud1Q9CUB6 Atf7-201ENSMUST00000096143 390 ntBASIC10.02□□□□□ -0.81
Otud1Q9CUB6 Olfr1313-201ENSMUST00000099599 938 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Otud1Q9CUB6 Acsm5-205ENSMUST00000207440 2494 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Otud1Q9CUB6 Dcaf11-206ENSMUST00000128490 2660 ntAPPRIS P2 TSL 2 BASIC10.02□□□□□ -0.81
Otud1Q9CUB6 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Otud1Q9CUB6 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC10.02□□□□□ -0.81
Otud1Q9CUB6 Smpd4-218ENSMUST00000170273 2166 ntTSL 5 BASIC10.02□□□□□ -0.81
Otud1Q9CUB6 Txk-203ENSMUST00000197313 2190 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Otud1Q9CUB6 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Otud1Q9CUB6 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Otud1Q9CUB6 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Otud1Q9CUB6 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Otud1Q9CUB6 Armcx3-203ENSMUST00000086884 3488 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Otud1Q9CUB6 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Otud1Q9CUB6 Moxd2-201ENSMUST00000031937 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Otud1Q9CUB6 4933425M03Rik-201ENSMUST00000195991 1544 ntBASIC10.02□□□□□ -0.81
Otud1Q9CUB6 Cts7-201ENSMUST00000021892 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Otud1Q9CUB6 CT009713.5-203ENSMUST00000224218 2079 ntBASIC10.02□□□□□ -0.81
Otud1Q9CUB6 Mkrn1-ps1-201ENSMUST00000122035 1390 ntBASIC10.01□□□□□ -0.81
Otud1Q9CUB6 Eif3s6-ps4-201ENSMUST00000202873 1388 ntBASIC10.01□□□□□ -0.81
Otud1Q9CUB6 Gm45885-202ENSMUST00000211520 1383 ntBASIC10.01□□□□□ -0.81
Otud1Q9CUB6 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Otud1Q9CUB6 4932438H23Rik-201ENSMUST00000035689 2684 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Otud1Q9CUB6 Gsdma3-202ENSMUST00000107508 1587 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Otud1Q9CUB6 4930517J16Rik-201ENSMUST00000193095 1568 ntBASIC10.01□□□□□ -0.81
Otud1Q9CUB6 Psmc1-201ENSMUST00000021595 1591 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Otud1Q9CUB6 Ppef2-202ENSMUST00000201130 2878 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Otud1Q9CUB6 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Otud1Q9CUB6 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Otud1Q9CUB6 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Otud1Q9CUB6 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Otud1Q9CUB6 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC10.01□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms