Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC10.55□□□□□ -0.72
Trub1Q8C0D0 Shroom2-201ENSMUST00000062317 6997 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trub1Q8C0D0 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Trub1Q8C0D0 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trub1Q8C0D0 Wdr35-201ENSMUST00000085745 4501 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trub1Q8C0D0 Zbtb8b-201ENSMUST00000053042 3288 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trub1Q8C0D0 Ctsll3-201ENSMUST00000043754 1337 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trub1Q8C0D0 Spata31d1a-201ENSMUST00000066510 4261 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
Trub1Q8C0D0 Gm11497-201ENSMUST00000138295 2154 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trub1Q8C0D0 Gm39312-201ENSMUST00000213586 2195 ntTSL 5 BASIC10.55□□□□□ -0.72
Trub1Q8C0D0 P2rx7-201ENSMUST00000031425 1605 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trub1Q8C0D0 Exosc1-201ENSMUST00000075280 1622 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trub1Q8C0D0 B930082K07Rik-201ENSMUST00000181046 2478 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trub1Q8C0D0 Scnn1b-201ENSMUST00000033161 2478 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trub1Q8C0D0 Dctn1-204ENSMUST00000113918 4321 ntTSL 5 BASIC10.54□□□□□ -0.72
Trub1Q8C0D0 Nadsyn1-201ENSMUST00000033415 2641 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trub1Q8C0D0 Tmem150c-201ENSMUST00000063192 3084 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trub1Q8C0D0 4930478P22Rik-203ENSMUST00000202026 2060 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trub1Q8C0D0 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Trub1Q8C0D0 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC10.54□□□□□ -0.72
Trub1Q8C0D0 Zscan21-201ENSMUST00000062350 2252 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trub1Q8C0D0 2310065F04Rik-201ENSMUST00000125538 2724 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trub1Q8C0D0 Fam71e2-202ENSMUST00000174409 2716 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Trub1Q8C0D0 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trub1Q8C0D0 P2ry1-202ENSMUST00000193201 3614 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trub1Q8C0D0 Thsd4-201ENSMUST00000034829 4816 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trub1Q8C0D0 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trub1Q8C0D0 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trub1Q8C0D0 Use1-203ENSMUST00000110054 973 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trub1Q8C0D0 Raf1-202ENSMUST00000112949 2946 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trub1Q8C0D0 Gm11771-201ENSMUST00000118124 732 ntBASIC10.54□□□□□ -0.72
Trub1Q8C0D0 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC10.54□□□□□ -0.72
Trub1Q8C0D0 Fbxo16-201ENSMUST00000169656 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trub1Q8C0D0 Gm23400-201ENSMUST00000174994 102 ntBASIC10.54□□□□□ -0.72
Trub1Q8C0D0 Gm26463-201ENSMUST00000175065 101 ntBASIC10.54□□□□□ -0.72
Trub1Q8C0D0 Gm24332-201ENSMUST00000175102 102 ntBASIC10.54□□□□□ -0.72
Trub1Q8C0D0 Gm25959-201ENSMUST00000175112 102 ntBASIC10.54□□□□□ -0.72
Trub1Q8C0D0 Gm22475-201ENSMUST00000175169 102 ntBASIC10.54□□□□□ -0.72
Trub1Q8C0D0 Gm22903-201ENSMUST00000175193 102 ntBASIC10.54□□□□□ -0.72
Trub1Q8C0D0 Gm25070-201ENSMUST00000175237 102 ntBASIC10.54□□□□□ -0.72
Trub1Q8C0D0 Gm24159-201ENSMUST00000175264 102 ntBASIC10.54□□□□□ -0.72
Trub1Q8C0D0 Gm25299-201ENSMUST00000175283 102 ntBASIC10.54□□□□□ -0.72
Trub1Q8C0D0 Gm23798-201ENSMUST00000175560 102 ntBASIC10.54□□□□□ -0.72
Trub1Q8C0D0 Gm23802-201ENSMUST00000175565 102 ntBASIC10.54□□□□□ -0.72
Trub1Q8C0D0 Gm25708-201ENSMUST00000177687 102 ntBASIC10.54□□□□□ -0.72
Trub1Q8C0D0 Gm24370-201ENSMUST00000178007 102 ntBASIC10.54□□□□□ -0.72
Trub1Q8C0D0 Gm23049-201ENSMUST00000178068 102 ntBASIC10.54□□□□□ -0.72
Trub1Q8C0D0 Gm28019-201ENSMUST00000178138 101 ntBASIC10.54□□□□□ -0.72
Trub1Q8C0D0 Gm25571-201ENSMUST00000178322 102 ntBASIC10.54□□□□□ -0.72
Trub1Q8C0D0 Gm25355-201ENSMUST00000178456 101 ntBASIC10.54□□□□□ -0.72
Trub1Q8C0D0 Gm24975-201ENSMUST00000178492 101 ntBASIC10.54□□□□□ -0.72
Trub1Q8C0D0 Gm23189-201ENSMUST00000178954 102 ntBASIC10.54□□□□□ -0.72
Trub1Q8C0D0 Gm25100-201ENSMUST00000179750 101 ntBASIC10.54□□□□□ -0.72
Trub1Q8C0D0 Gm23064-201ENSMUST00000179866 101 ntBASIC10.54□□□□□ -0.72
Trub1Q8C0D0 6430562O15Rik-201ENSMUST00000180491 2488 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trub1Q8C0D0 Mir6958-201ENSMUST00000184207 73 ntBASIC10.54□□□□□ -0.72
Trub1Q8C0D0 Mir6941-201ENSMUST00000184711 59 ntBASIC10.54□□□□□ -0.72
Trub1Q8C0D0 Gm29595-202ENSMUST00000187954 466 ntTSL 3 BASIC10.54□□□□□ -0.72
Trub1Q8C0D0 Gm42571-201ENSMUST00000201197 2464 ntBASIC10.54□□□□□ -0.72
Trub1Q8C0D0 Gm39117-201ENSMUST00000207692 1569 ntTSL 5 BASIC10.54□□□□□ -0.72
Trub1Q8C0D0 Gm45893-201ENSMUST00000211899 247 ntBASIC10.54□□□□□ -0.72
Trub1Q8C0D0 Gm18515-201ENSMUST00000219755 797 ntBASIC10.54□□□□□ -0.72
Trub1Q8C0D0 CT025689.1-201ENSMUST00000225214 283 ntBASIC10.54□□□□□ -0.72
Trub1Q8C0D0 AC242269.1-201ENSMUST00000227020 741 ntBASIC10.54□□□□□ -0.72
Trub1Q8C0D0 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trub1Q8C0D0 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trub1Q8C0D0 Arid5a-202ENSMUST00000115029 4329 ntTSL 3 BASIC10.54□□□□□ -0.72
Trub1Q8C0D0 Mcm5-205ENSMUST00000212811 2653 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trub1Q8C0D0 A830010M20Rik-208ENSMUST00000211896 5256 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Trub1Q8C0D0 Tfdp1-204ENSMUST00000209885 2511 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trub1Q8C0D0 Il33-201ENSMUST00000025724 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trub1Q8C0D0 Hdhd2-201ENSMUST00000026485 2357 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trub1Q8C0D0 Fgd4-204ENSMUST00000161188 2214 ntTSL 2 BASIC10.54□□□□□ -0.72
Trub1Q8C0D0 Gm42879-201ENSMUST00000198656 2214 ntBASIC10.54□□□□□ -0.72
Trub1Q8C0D0 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Trub1Q8C0D0 Slc16a5-202ENSMUST00000106532 2062 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trub1Q8C0D0 1700022A22Rik-202ENSMUST00000187130 1458 ntTSL 5 BASIC10.54□□□□□ -0.72
Trub1Q8C0D0 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Trub1Q8C0D0 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trub1Q8C0D0 Pla1a-201ENSMUST00000002926 1972 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trub1Q8C0D0 CT010575.1-201ENSMUST00000220666 2924 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trub1Q8C0D0 1810034E14Rik-201ENSMUST00000181403 1805 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trub1Q8C0D0 Gphn-201ENSMUST00000052472 3570 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trub1Q8C0D0 Tbp-203ENSMUST00000118001 1652 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trub1Q8C0D0 Gmip-201ENSMUST00000036074 3933 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trub1Q8C0D0 Trim34b-202ENSMUST00000180136 1535 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Trub1Q8C0D0 Slc7a1-201ENSMUST00000048116 7179 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trub1Q8C0D0 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Trub1Q8C0D0 Gm42970-201ENSMUST00000196407 1352 ntBASIC10.53□□□□□ -0.72
Trub1Q8C0D0 Rasgrp4-201ENSMUST00000032811 4621 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trub1Q8C0D0 Rasgrp4-202ENSMUST00000094617 4617 ntTSL 5 BASIC10.53□□□□□ -0.72
Trub1Q8C0D0 AC130671.3-201ENSMUST00000227393 1897 ntBASIC10.53□□□□□ -0.72
Trub1Q8C0D0 Nkx2-2os-201ENSMUST00000136998 4345 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trub1Q8C0D0 Arhgap10-203ENSMUST00000210922 2208 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trub1Q8C0D0 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trub1Q8C0D0 Nox1-204ENSMUST00000159259 1581 ntTSL 5 BASIC10.53□□□□□ -0.72
Trub1Q8C0D0 Fgfr1-213ENSMUST00000167764 2915 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trub1Q8C0D0 Casq2-205ENSMUST00000165540 2434 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trub1Q8C0D0 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trub1Q8C0D0 Proser3-201ENSMUST00000062708 1905 ntAPPRIS P2 TSL 5 BASIC10.53□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms