Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Sec61a2Q9JLR1 Gm24791-201ENSMUST00000104284 131 ntBASIC9.28□□□□□ -0.92
Sec61a2Q9JLR1 Gm8216-201ENSMUST00000117232 601 ntBASIC9.28□□□□□ -0.92
Sec61a2Q9JLR1 Gm11544-201ENSMUST00000120215 382 ntBASIC9.28□□□□□ -0.92
Sec61a2Q9JLR1 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC9.28□□□□□ -0.92
Sec61a2Q9JLR1 Gm9574-201ENSMUST00000173127 845 ntBASIC9.28□□□□□ -0.92
Sec61a2Q9JLR1 Gm24328-201ENSMUST00000175104 67 ntBASIC9.28□□□□□ -0.92
Sec61a2Q9JLR1 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Sec61a2Q9JLR1 Gm5543-201ENSMUST00000193329 1091 ntBASIC9.28□□□□□ -0.92
Sec61a2Q9JLR1 Gm4430-202ENSMUST00000193902 1041 ntBASIC9.28□□□□□ -0.92
Sec61a2Q9JLR1 Gm20186-201ENSMUST00000201775 737 ntTSL 3 BASIC9.28□□□□□ -0.92
Sec61a2Q9JLR1 Gm43460-201ENSMUST00000202491 1057 ntBASIC9.28□□□□□ -0.92
Sec61a2Q9JLR1 Olfr1358-201ENSMUST00000204477 1064 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Sec61a2Q9JLR1 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Sec61a2Q9JLR1 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Sec61a2Q9JLR1 Pvalb-201ENSMUST00000005860 977 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Sec61a2Q9JLR1 Ttc24-202ENSMUST00000064550 671 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Sec61a2Q9JLR1 Olfr60-201ENSMUST00000075470 936 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Sec61a2Q9JLR1 Gm25514-201ENSMUST00000083860 135 ntBASIC9.28□□□□□ -0.92
Sec61a2Q9JLR1 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Sec61a2Q9JLR1 Gm44798-201ENSMUST00000208123 2410 ntBASIC9.28□□□□□ -0.92
Sec61a2Q9JLR1 Mlph-201ENSMUST00000027528 4499 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Sec61a2Q9JLR1 Gm28581-201ENSMUST00000186086 2177 ntBASIC9.28□□□□□ -0.92
Sec61a2Q9JLR1 Tpd52-202ENSMUST00000091354 2193 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Sec61a2Q9JLR1 Loxl4-201ENSMUST00000026190 3738 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Sec61a2Q9JLR1 Pomgnt1-204ENSMUST00000120083 2953 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Sec61a2Q9JLR1 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC9.28□□□□□ -0.92
Sec61a2Q9JLR1 Gm44115-201ENSMUST00000203917 2069 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Sec61a2Q9JLR1 Gpi1-201ENSMUST00000038027 2884 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Sec61a2Q9JLR1 Parva-201ENSMUST00000033030 4454 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Sec61a2Q9JLR1 Sp100-201ENSMUST00000054279 1978 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Sec61a2Q9JLR1 Kcnj15-206ENSMUST00000113859 5046 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Sec61a2Q9JLR1 AC126459.1-201ENSMUST00000214791 2123 ntBASIC9.28□□□□□ -0.92
Sec61a2Q9JLR1 Dido1-205ENSMUST00000103056 4281 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Sec61a2Q9JLR1 Gm15604-201ENSMUST00000118350 1456 ntBASIC9.28□□□□□ -0.92
Sec61a2Q9JLR1 Tacc2-203ENSMUST00000084513 9029 ntAPPRIS P4 TSL 5 BASIC9.27□□□□□ -0.92
Sec61a2Q9JLR1 Vmn1r199-203ENSMUST00000227689 5537 ntAPPRIS ALT2 BASIC9.27□□□□□ -0.92
Sec61a2Q9JLR1 Calr4-201ENSMUST00000030285 1606 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Sec61a2Q9JLR1 Ncam1-201ENSMUST00000114476 2567 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.92
Sec61a2Q9JLR1 Sema4d-203ENSMUST00000110040 4472 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Sec61a2Q9JLR1 Gpm6b-201ENSMUST00000060210 2858 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.92
Sec61a2Q9JLR1 Sall4-203ENSMUST00000103074 3741 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Sec61a2Q9JLR1 Atcay-201ENSMUST00000047408 3736 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Sec61a2Q9JLR1 Chd1-201ENSMUST00000024620 3196 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Sec61a2Q9JLR1 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Sec61a2Q9JLR1 Sap130-202ENSMUST00000178164 4030 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Sec61a2Q9JLR1 Nlrp12-201ENSMUST00000108653 6928 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Sec61a2Q9JLR1 Gm22582-201ENSMUST00000102283 94 ntBASIC9.27□□□□□ -0.93
Sec61a2Q9JLR1 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
Sec61a2Q9JLR1 Gm11628-201ENSMUST00000117568 171 ntBASIC9.27□□□□□ -0.93
Sec61a2Q9JLR1 Gm11919-201ENSMUST00000117609 721 ntBASIC9.27□□□□□ -0.93
Sec61a2Q9JLR1 Gm13549-201ENSMUST00000118339 796 ntBASIC9.27□□□□□ -0.93
Sec61a2Q9JLR1 Gm11578-201ENSMUST00000118530 459 ntBASIC9.27□□□□□ -0.93
Sec61a2Q9JLR1 Gm15003-201ENSMUST00000118884 446 ntBASIC9.27□□□□□ -0.93
Sec61a2Q9JLR1 Gm11340-201ENSMUST00000119226 412 ntBASIC9.27□□□□□ -0.93
Sec61a2Q9JLR1 Gm14234-201ENSMUST00000119539 845 ntBASIC9.27□□□□□ -0.93
Sec61a2Q9JLR1 Gm15136-201ENSMUST00000120552 533 ntBASIC9.27□□□□□ -0.93
Sec61a2Q9JLR1 Gm12783-201ENSMUST00000121425 397 ntBASIC9.27□□□□□ -0.93
Sec61a2Q9JLR1 Gm15620-201ENSMUST00000122949 270 ntBASIC9.27□□□□□ -0.93
Sec61a2Q9JLR1 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Sec61a2Q9JLR1 Aamdc-206ENSMUST00000136757 789 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.93
Sec61a2Q9JLR1 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Sec61a2Q9JLR1 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC9.27□□□□□ -0.93
Sec61a2Q9JLR1 Gm18201-201ENSMUST00000174735 875 ntBASIC9.27□□□□□ -0.93
Sec61a2Q9JLR1 n-R5s130-201ENSMUST00000178128 119 ntBASIC9.27□□□□□ -0.93
Sec61a2Q9JLR1 Gm24312-201ENSMUST00000178677 119 ntBASIC9.27□□□□□ -0.93
Sec61a2Q9JLR1 n-R5s106-201ENSMUST00000179060 119 ntBASIC9.27□□□□□ -0.93
Sec61a2Q9JLR1 n-R5s118-201ENSMUST00000179887 119 ntBASIC9.27□□□□□ -0.93
Sec61a2Q9JLR1 Gm5801-201ENSMUST00000182247 780 ntBASIC9.27□□□□□ -0.93
Sec61a2Q9JLR1 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Sec61a2Q9JLR1 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC9.27□□□□□ -0.93
Sec61a2Q9JLR1 Gm19566-201ENSMUST00000199576 610 ntBASIC9.27□□□□□ -0.93
Sec61a2Q9JLR1 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC9.27□□□□□ -0.93
Sec61a2Q9JLR1 AC134601.2-201ENSMUST00000221071 130 ntBASIC9.27□□□□□ -0.93
Sec61a2Q9JLR1 Gm5189-201ENSMUST00000221796 261 ntBASIC9.27□□□□□ -0.93
Sec61a2Q9JLR1 Olfr1199-201ENSMUST00000099813 933 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
Sec61a2Q9JLR1 Skiv2l-201ENSMUST00000046022 3951 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Sec61a2Q9JLR1 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Sec61a2Q9JLR1 C1rb-201ENSMUST00000184647 2429 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Sec61a2Q9JLR1 Bcat1-203ENSMUST00000111742 2556 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Sec61a2Q9JLR1 Kif2a-206ENSMUST00000159772 2570 ntTSL 5 BASIC9.27□□□□□ -0.93
Sec61a2Q9JLR1 Txlng-204ENSMUST00000112316 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Sec61a2Q9JLR1 Aplp2-201ENSMUST00000072634 3634 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Sec61a2Q9JLR1 Gm42450-201ENSMUST00000199286 2644 ntTSL 5 BASIC9.27□□□□□ -0.93
Sec61a2Q9JLR1 Anapc15-213ENSMUST00000178851 2797 ntTSL 2 BASIC9.27□□□□□ -0.93
Sec61a2Q9JLR1 D030028A08Rik-202ENSMUST00000131501 3542 ntTSL 2 BASIC9.27□□□□□ -0.93
Sec61a2Q9JLR1 Nup214-201ENSMUST00000065398 6605 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Sec61a2Q9JLR1 Cd3e-201ENSMUST00000102832 1462 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Sec61a2Q9JLR1 Gm13169-201ENSMUST00000122090 1459 ntBASIC9.27□□□□□ -0.93
Sec61a2Q9JLR1 AC156802.2-203ENSMUST00000226032 1906 ntBASIC9.27□□□□□ -0.93
Sec61a2Q9JLR1 Slc7a3-202ENSMUST00000101362 2371 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Sec61a2Q9JLR1 Gm30074-201ENSMUST00000193192 2541 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Sec61a2Q9JLR1 Glt1d1-201ENSMUST00000118139 3413 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Sec61a2Q9JLR1 Phka2-204ENSMUST00000112380 4341 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Sec61a2Q9JLR1 Itgam-207ENSMUST00000098015 4803 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Sec61a2Q9JLR1 Olfr764-ps1-201ENSMUST00000204763 2854 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Sec61a2Q9JLR1 Fam71e2-202ENSMUST00000174409 2716 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Sec61a2Q9JLR1 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Sec61a2Q9JLR1 Slc27a5-201ENSMUST00000032539 2288 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Sec61a2Q9JLR1 Olfr1090-202ENSMUST00000215991 2103 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 88.3 ms