Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Otud1Q9CUB6 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Otud1Q9CUB6 D030068K23Rik-203ENSMUST00000181098 1399 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Otud1Q9CUB6 Rnf6-206ENSMUST00000161859 3452 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Otud1Q9CUB6 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Otud1Q9CUB6 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Otud1Q9CUB6 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Otud1Q9CUB6 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Otud1Q9CUB6 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Otud1Q9CUB6 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Otud1Q9CUB6 Gpm6b-209ENSMUST00000112235 4480 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Otud1Q9CUB6 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Otud1Q9CUB6 Psmb3-201ENSMUST00000103147 766 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Otud1Q9CUB6 Ighv1-12-201ENSMUST00000103500 294 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Otud1Q9CUB6 Gm22594-201ENSMUST00000104251 130 ntBASIC10.04□□□□□ -0.8
Otud1Q9CUB6 Gm14274-201ENSMUST00000117182 615 ntBASIC10.04□□□□□ -0.8
Otud1Q9CUB6 Cbx3-ps3-201ENSMUST00000118595 550 ntBASIC10.04□□□□□ -0.8
Otud1Q9CUB6 Gm15741-201ENSMUST00000119401 754 ntBASIC10.04□□□□□ -0.8
Otud1Q9CUB6 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Otud1Q9CUB6 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC10.04□□□□□ -0.8
Otud1Q9CUB6 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Otud1Q9CUB6 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC10.04□□□□□ -0.8
Otud1Q9CUB6 Gm4778-202ENSMUST00000159517 1241 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Otud1Q9CUB6 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC10.04□□□□□ -0.8
Otud1Q9CUB6 Gm5274-201ENSMUST00000182641 1003 ntBASIC10.04□□□□□ -0.8
Otud1Q9CUB6 1500004A13Rik-201ENSMUST00000183374 891 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Otud1Q9CUB6 Fam122c-203ENSMUST00000186314 898 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
Otud1Q9CUB6 Gm35584-201ENSMUST00000191767 641 ntTSL 5 BASIC10.04□□□□□ -0.8
Otud1Q9CUB6 Ighv1-2-201ENSMUST00000195325 378 ntBASIC10.04□□□□□ -0.8
Otud1Q9CUB6 Gm37301-201ENSMUST00000195412 568 ntBASIC10.04□□□□□ -0.8
Otud1Q9CUB6 Gm43778-201ENSMUST00000199438 199 ntBASIC10.04□□□□□ -0.8
Otud1Q9CUB6 Ghrl-205ENSMUST00000204163 447 ntAPPRIS ALT1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Otud1Q9CUB6 Gm44939-201ENSMUST00000206939 814 ntTSL 3 BASIC10.04□□□□□ -0.8
Otud1Q9CUB6 Gm7319-201ENSMUST00000210047 778 ntBASIC10.04□□□□□ -0.8
Otud1Q9CUB6 Gm9619-201ENSMUST00000211587 762 ntBASIC10.04□□□□□ -0.8
Otud1Q9CUB6 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC10.04□□□□□ -0.8
Otud1Q9CUB6 A1cf-203ENSMUST00000224400 1204 ntBASIC10.04□□□□□ -0.8
Otud1Q9CUB6 Stfa2-201ENSMUST00000023619 423 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Otud1Q9CUB6 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Otud1Q9CUB6 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Otud1Q9CUB6 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Otud1Q9CUB6 Slfn3-201ENSMUST00000019130 1816 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Otud1Q9CUB6 Olfr1140-201ENSMUST00000214723 1421 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Otud1Q9CUB6 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Otud1Q9CUB6 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Otud1Q9CUB6 Gm15651-201ENSMUST00000159953 2507 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Otud1Q9CUB6 Sh3gl2-204ENSMUST00000107189 3231 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Otud1Q9CUB6 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Otud1Q9CUB6 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Otud1Q9CUB6 AI854703-202ENSMUST00000154570 3806 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
Otud1Q9CUB6 Inpp5b-201ENSMUST00000094782 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Otud1Q9CUB6 Pde2a-202ENSMUST00000166652 3977 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Otud1Q9CUB6 Nrf1-206ENSMUST00000115204 2047 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Otud1Q9CUB6 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Otud1Q9CUB6 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC10.04□□□□□ -0.8
Otud1Q9CUB6 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Otud1Q9CUB6 Cdca8-202ENSMUST00000084296 1626 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Otud1Q9CUB6 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Otud1Q9CUB6 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Otud1Q9CUB6 Mak16-201ENSMUST00000033983 1902 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Otud1Q9CUB6 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Otud1Q9CUB6 Nampt-201ENSMUST00000020886 4527 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Otud1Q9CUB6 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Otud1Q9CUB6 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Otud1Q9CUB6 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Otud1Q9CUB6 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Otud1Q9CUB6 C130026L21Rik-204ENSMUST00000199587 1838 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Otud1Q9CUB6 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Otud1Q9CUB6 Srpx2-201ENSMUST00000033606 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Otud1Q9CUB6 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Otud1Q9CUB6 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Otud1Q9CUB6 Atp13a4-201ENSMUST00000039090 2878 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Otud1Q9CUB6 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Otud1Q9CUB6 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Otud1Q9CUB6 Unc119-202ENSMUST00000100755 933 ntTSL 2 BASIC10.03□□□□□ -0.8
Otud1Q9CUB6 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Otud1Q9CUB6 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Otud1Q9CUB6 Cst8-202ENSMUST00000109947 804 ntAPPRIS P1 TSL 3 BASIC10.03□□□□□ -0.8
Otud1Q9CUB6 Gin1-202ENSMUST00000112842 1037 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Otud1Q9CUB6 Arl6-203ENSMUST00000118438 875 ntTSL 3 BASIC10.03□□□□□ -0.8
Otud1Q9CUB6 Eef1d-217ENSMUST00000151066 704 ntTSL 5 BASIC10.03□□□□□ -0.8
Otud1Q9CUB6 Gng2-203ENSMUST00000159073 960 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
Otud1Q9CUB6 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Otud1Q9CUB6 Odaph-201ENSMUST00000178614 760 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Otud1Q9CUB6 Krtap22-2-201ENSMUST00000178913 380 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Otud1Q9CUB6 Psmb6-ps2-201ENSMUST00000187074 705 ntBASIC10.03□□□□□ -0.8
Otud1Q9CUB6 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC10.03□□□□□ -0.8
Otud1Q9CUB6 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC10.03□□□□□ -0.8
Otud1Q9CUB6 Gm42859-201ENSMUST00000199572 193 ntBASIC10.03□□□□□ -0.8
Otud1Q9CUB6 Gm7939-201ENSMUST00000201233 1050 ntBASIC10.03□□□□□ -0.8
Otud1Q9CUB6 BC080696-201ENSMUST00000202858 1218 ntBASIC10.03□□□□□ -0.8
Otud1Q9CUB6 Chac2-201ENSMUST00000020553 1018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Otud1Q9CUB6 AC161250.1-201ENSMUST00000213426 1111 ntBASIC10.03□□□□□ -0.8
Otud1Q9CUB6 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Otud1Q9CUB6 AC171204.1-201ENSMUST00000215867 975 ntTSL 5 BASIC10.03□□□□□ -0.8
Otud1Q9CUB6 AC153532.1-201ENSMUST00000218126 1111 ntBASIC10.03□□□□□ -0.8
Otud1Q9CUB6 Gm18242-201ENSMUST00000218455 542 ntBASIC10.03□□□□□ -0.8
Otud1Q9CUB6 AC192616.3-201ENSMUST00000220797 1124 ntBASIC10.03□□□□□ -0.8
Otud1Q9CUB6 AC154742.1-201ENSMUST00000223477 573 ntTSL 5 BASIC10.03□□□□□ -0.8
Otud1Q9CUB6 AC116797.2-202ENSMUST00000223587 1017 ntBASIC10.03□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms