Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC10.19□□□□□ -0.78
Pcdhga4Q91XY4 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pcdhga4Q91XY4 Gm5148-203ENSMUST00000108105 1282 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pcdhga4Q91XY4 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pcdhga4Q91XY4 Tpm1-205ENSMUST00000113685 1208 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pcdhga4Q91XY4 Gm11979-201ENSMUST00000119629 743 ntBASIC10.19□□□□□ -0.78
Pcdhga4Q91XY4 7330404K18Rik-201ENSMUST00000125558 487 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Pcdhga4Q91XY4 Gm12606-202ENSMUST00000129527 1184 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Pcdhga4Q91XY4 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC10.19□□□□□ -0.78
Pcdhga4Q91XY4 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC10.19□□□□□ -0.78
Pcdhga4Q91XY4 Gzmn-201ENSMUST00000015587 956 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pcdhga4Q91XY4 Gm25226-201ENSMUST00000158198 123 ntBASIC10.19□□□□□ -0.78
Pcdhga4Q91XY4 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Pcdhga4Q91XY4 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Pcdhga4Q91XY4 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Pcdhga4Q91XY4 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Pcdhga4Q91XY4 Dnajc4-202ENSMUST00000179118 840 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pcdhga4Q91XY4 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Pcdhga4Q91XY4 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Pcdhga4Q91XY4 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Pcdhga4Q91XY4 Gm29543-201ENSMUST00000188138 967 ntBASIC10.19□□□□□ -0.78
Pcdhga4Q91XY4 Gm5700-201ENSMUST00000191483 989 ntBASIC10.19□□□□□ -0.78
Pcdhga4Q91XY4 Gm43244-201ENSMUST00000196994 1285 ntBASIC10.19□□□□□ -0.78
Pcdhga4Q91XY4 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC10.19□□□□□ -0.78
Pcdhga4Q91XY4 Gm18706-201ENSMUST00000210053 1066 ntBASIC10.19□□□□□ -0.78
Pcdhga4Q91XY4 Thoc7-209ENSMUST00000225325 765 ntBASIC10.19□□□□□ -0.78
Pcdhga4Q91XY4 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pcdhga4Q91XY4 Olfr1015-201ENSMUST00000047870 1016 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Pcdhga4Q91XY4 Olfr435-201ENSMUST00000058118 942 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Pcdhga4Q91XY4 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pcdhga4Q91XY4 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pcdhga4Q91XY4 Gm45132-201ENSMUST00000207234 2542 ntBASIC10.19□□□□□ -0.78
Pcdhga4Q91XY4 Duoxa1-203ENSMUST00000110538 2467 ntTSL 5 BASIC10.19□□□□□ -0.78
Pcdhga4Q91XY4 Smad2-201ENSMUST00000025453 2410 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pcdhga4Q91XY4 Ptbp3-202ENSMUST00000102883 3409 ntAPPRIS P4 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pcdhga4Q91XY4 Gm38359-201ENSMUST00000191884 2225 ntBASIC10.19□□□□□ -0.78
Pcdhga4Q91XY4 Eef2-201ENSMUST00000047864 3089 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pcdhga4Q91XY4 Zfp111-202ENSMUST00000073833 3079 ntAPPRIS P3 TSL 5 BASIC10.19□□□□□ -0.78
Pcdhga4Q91XY4 AC022682.1-201ENSMUST00000224624 2023 ntBASIC10.19□□□□□ -0.78
Pcdhga4Q91XY4 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Pcdhga4Q91XY4 Gm37084-201ENSMUST00000191688 5898 ntBASIC10.19□□□□□ -0.78
Pcdhga4Q91XY4 Man1b1-201ENSMUST00000042390 3755 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pcdhga4Q91XY4 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pcdhga4Q91XY4 Bckdk-207ENSMUST00000206745 1702 ntTSL 5 BASIC10.19□□□□□ -0.78
Pcdhga4Q91XY4 Syt2-201ENSMUST00000121990 6879 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pcdhga4Q91XY4 Ehmt1-210ENSMUST00000147147 5953 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pcdhga4Q91XY4 R3hdm2-201ENSMUST00000064793 4175 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Pcdhga4Q91XY4 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Pcdhga4Q91XY4 Pld1-201ENSMUST00000067757 4804 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Pcdhga4Q91XY4 Gm13140-201ENSMUST00000119840 3151 ntBASIC10.18□□□□□ -0.78
Pcdhga4Q91XY4 Prox1-203ENSMUST00000177288 3144 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Pcdhga4Q91XY4 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Pcdhga4Q91XY4 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Pcdhga4Q91XY4 Adamtsl2-201ENSMUST00000091233 3612 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Pcdhga4Q91XY4 Ankrd36-201ENSMUST00000109855 1363 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Pcdhga4Q91XY4 Extl1-201ENSMUST00000030643 4126 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Pcdhga4Q91XY4 Wdr62-201ENSMUST00000108190 4742 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Pcdhga4Q91XY4 Rreb1-207ENSMUST00000128570 8436 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Pcdhga4Q91XY4 Klhl22-202ENSMUST00000120488 2596 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Pcdhga4Q91XY4 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Pcdhga4Q91XY4 Pdzk1ip1-202ENSMUST00000106548 887 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Pcdhga4Q91XY4 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Pcdhga4Q91XY4 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC10.18□□□□□ -0.78
Pcdhga4Q91XY4 Gm15036-201ENSMUST00000118880 400 ntBASIC10.18□□□□□ -0.78
Pcdhga4Q91XY4 Gm12453-201ENSMUST00000121981 331 ntBASIC10.18□□□□□ -0.78
Pcdhga4Q91XY4 Gm22344-201ENSMUST00000122642 278 ntBASIC10.18□□□□□ -0.78
Pcdhga4Q91XY4 Gm13857-201ENSMUST00000139645 173 ntBASIC10.18□□□□□ -0.78
Pcdhga4Q91XY4 Ccr6-204ENSMUST00000167956 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Pcdhga4Q91XY4 Krtcap2-204ENSMUST00000168900 582 ntTSL 3 BASIC10.18□□□□□ -0.78
Pcdhga4Q91XY4 Gm5801-201ENSMUST00000182247 780 ntBASIC10.18□□□□□ -0.78
Pcdhga4Q91XY4 Gm27316-201ENSMUST00000184884 277 ntBASIC10.18□□□□□ -0.78
Pcdhga4Q91XY4 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
Pcdhga4Q91XY4 Gm6855-201ENSMUST00000206307 790 ntBASIC10.18□□□□□ -0.78
Pcdhga4Q91XY4 Ywhaq-ps1-201ENSMUST00000206623 710 ntBASIC10.18□□□□□ -0.78
Pcdhga4Q91XY4 Gm32111-201ENSMUST00000207689 846 ntBASIC10.18□□□□□ -0.78
Pcdhga4Q91XY4 AC126799.1-201ENSMUST00000221976 246 ntBASIC10.18□□□□□ -0.78
Pcdhga4Q91XY4 AC101205.2-201ENSMUST00000226206 715 ntBASIC10.18□□□□□ -0.78
Pcdhga4Q91XY4 Rnasek-201ENSMUST00000040428 611 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Pcdhga4Q91XY4 Vmn1r212-201ENSMUST00000095960 1164 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Pcdhga4Q91XY4 Npy1r-201ENSMUST00000039303 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Pcdhga4Q91XY4 Fhad1-203ENSMUST00000105780 4809 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Pcdhga4Q91XY4 Stra6-201ENSMUST00000034880 2993 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Pcdhga4Q91XY4 AC165148.1-201ENSMUST00000224795 2372 ntBASIC10.18□□□□□ -0.78
Pcdhga4Q91XY4 Ogdh-204ENSMUST00000101554 4106 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Pcdhga4Q91XY4 Slc27a5-201ENSMUST00000032539 2288 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Pcdhga4Q91XY4 Cux1-207ENSMUST00000176216 2821 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Pcdhga4Q91XY4 Olfr410-202ENSMUST00000213831 5070 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Pcdhga4Q91XY4 Tbp-203ENSMUST00000118001 1652 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Pcdhga4Q91XY4 Gm28581-201ENSMUST00000186086 2177 ntBASIC10.18□□□□□ -0.78
Pcdhga4Q91XY4 Wdr37-212ENSMUST00000176922 3780 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Pcdhga4Q91XY4 2210010C04Rik-201ENSMUST00000031931 2142 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Pcdhga4Q91XY4 C230021G24Rik-201ENSMUST00000181196 3679 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Pcdhga4Q91XY4 Gm9877-201ENSMUST00000064271 2627 ntBASIC10.18□□□□□ -0.78
Pcdhga4Q91XY4 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Pcdhga4Q91XY4 Ap3m1-206ENSMUST00000154460 6732 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Pcdhga4Q91XY4 Gm7052-201ENSMUST00000167568 1512 ntBASIC10.17□□□□□ -0.78
Pcdhga4Q91XY4 Gm40634-201ENSMUST00000214129 2001 ntTSL 5 BASIC10.17□□□□□ -0.78
Pcdhga4Q91XY4 Dgcr2-201ENSMUST00000012152 4045 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pcdhga4Q91XY4 Bsn-201ENSMUST00000035208 15938 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Pcdhga4Q91XY4 Il12rb2-201ENSMUST00000018485 2998 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms