Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm3926-201ENSMUST00000223378 1123 ntBASIC10.57□□□□□ -0.72
Trub1Q8C0D0 AC117769.1-201ENSMUST00000224716 1120 ntBASIC10.57□□□□□ -0.72
Trub1Q8C0D0 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trub1Q8C0D0 Klra9-201ENSMUST00000071554 1123 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trub1Q8C0D0 Mrgpra1-201ENSMUST00000098438 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trub1Q8C0D0 Eci2-201ENSMUST00000021854 1746 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trub1Q8C0D0 Gm42735-201ENSMUST00000201718 1646 ntBASIC10.57□□□□□ -0.72
Trub1Q8C0D0 Dcc-201ENSMUST00000073379 4855 ntTSL 5 BASIC10.57□□□□□ -0.72
Trub1Q8C0D0 Gm15894-201ENSMUST00000162828 2067 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trub1Q8C0D0 Arhgef9-204ENSMUST00000113882 2445 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Trub1Q8C0D0 Amph-201ENSMUST00000003345 3367 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trub1Q8C0D0 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Trub1Q8C0D0 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trub1Q8C0D0 Tmem63a-205ENSMUST00000161523 3258 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trub1Q8C0D0 Mlxipl-201ENSMUST00000005507 3622 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trub1Q8C0D0 Zfp775-203ENSMUST00000204095 4143 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Trub1Q8C0D0 Rpl18-207ENSMUST00000210640 2989 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trub1Q8C0D0 Traf3-201ENSMUST00000021706 7060 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trub1Q8C0D0 Tgm7-201ENSMUST00000110675 2151 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Trub1Q8C0D0 Ifitm7-202ENSMUST00000178021 1823 ntAPPRIS ALT2 BASIC10.56□□□□□ -0.72
Trub1Q8C0D0 Rdh16f1-201ENSMUST00000128247 2766 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trub1Q8C0D0 Osgep-202ENSMUST00000159292 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trub1Q8C0D0 Bpifb9a-201ENSMUST00000088924 2065 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trub1Q8C0D0 Rnf216-201ENSMUST00000053498 4474 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trub1Q8C0D0 Gm26818-201ENSMUST00000181367 1360 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trub1Q8C0D0 Pds5a-201ENSMUST00000031104 4146 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Trub1Q8C0D0 Gm42731-201ENSMUST00000201839 1641 ntBASIC10.56□□□□□ -0.72
Trub1Q8C0D0 Cngb1-204ENSMUST00000121162 3336 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Trub1Q8C0D0 Gm19611-201ENSMUST00000216401 1865 ntBASIC10.56□□□□□ -0.72
Trub1Q8C0D0 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trub1Q8C0D0 Msrb1-202ENSMUST00000115262 886 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trub1Q8C0D0 Pex13-ps-201ENSMUST00000118184 1157 ntBASIC10.56□□□□□ -0.72
Trub1Q8C0D0 Gm11578-201ENSMUST00000118530 459 ntBASIC10.56□□□□□ -0.72
Trub1Q8C0D0 Gm15003-201ENSMUST00000118884 446 ntBASIC10.56□□□□□ -0.72
Trub1Q8C0D0 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trub1Q8C0D0 Gm12783-201ENSMUST00000121425 397 ntBASIC10.56□□□□□ -0.72
Trub1Q8C0D0 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC10.56□□□□□ -0.72
Trub1Q8C0D0 Pkib-204ENSMUST00000175852 731 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trub1Q8C0D0 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trub1Q8C0D0 Mir124-2hg-203ENSMUST00000186923 673 ntTSL 3 BASIC10.56□□□□□ -0.72
Trub1Q8C0D0 Gm28857-201ENSMUST00000188068 425 ntTSL 3 BASIC10.56□□□□□ -0.72
Trub1Q8C0D0 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC10.56□□□□□ -0.72
Trub1Q8C0D0 Gm38349-201ENSMUST00000195732 462 ntBASIC10.56□□□□□ -0.72
Trub1Q8C0D0 Gm21149-201ENSMUST00000197995 1212 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Trub1Q8C0D0 Gm6342-201ENSMUST00000204344 766 ntBASIC10.56□□□□□ -0.72
Trub1Q8C0D0 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trub1Q8C0D0 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trub1Q8C0D0 Gm7192-201ENSMUST00000210793 1137 ntBASIC10.56□□□□□ -0.72
Trub1Q8C0D0 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trub1Q8C0D0 Gm18119-201ENSMUST00000219972 616 ntBASIC10.56□□□□□ -0.72
Trub1Q8C0D0 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Trub1Q8C0D0 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC10.56□□□□□ -0.72
Trub1Q8C0D0 Nectin4-203ENSMUST00000111286 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trub1Q8C0D0 Oprm1-230ENSMUST00000154906 2039 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trub1Q8C0D0 Tle3-217ENSMUST00000162973 4114 ntAPPRIS P2 TSL 5 BASIC10.56□□□□□ -0.72
Trub1Q8C0D0 Ciapin1-209ENSMUST00000162538 4359 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trub1Q8C0D0 Gm45153-201ENSMUST00000205957 1901 ntBASIC10.56□□□□□ -0.72
Trub1Q8C0D0 BC035947-201ENSMUST00000170511 3063 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trub1Q8C0D0 CT009713.5-203ENSMUST00000224218 2079 ntBASIC10.56□□□□□ -0.72
Trub1Q8C0D0 Nek4-207ENSMUST00000228328 4245 ntAPPRIS P2 BASIC10.56□□□□□ -0.72
Trub1Q8C0D0 Pdpk1-202ENSMUST00000102927 7161 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trub1Q8C0D0 Stk26-201ENSMUST00000033444 3639 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trub1Q8C0D0 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Trub1Q8C0D0 Nxpe1-ps-201ENSMUST00000209981 1454 ntBASIC10.55□□□□□ -0.72
Trub1Q8C0D0 Tmprss2-201ENSMUST00000000395 3159 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trub1Q8C0D0 Edaradd-201ENSMUST00000179308 6668 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trub1Q8C0D0 Tor1aip2-201ENSMUST00000060404 5135 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trub1Q8C0D0 Ncoa2-201ENSMUST00000006037 4897 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trub1Q8C0D0 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trub1Q8C0D0 Calr-201ENSMUST00000003912 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trub1Q8C0D0 Parp3-201ENSMUST00000067218 2962 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trub1Q8C0D0 2310002L09Rik-202ENSMUST00000095023 1929 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trub1Q8C0D0 Sh3kbp1-204ENSMUST00000112451 3914 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trub1Q8C0D0 Ptk2b-202ENSMUST00000089250 3903 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trub1Q8C0D0 Slc5a4a-201ENSMUST00000020450 2055 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
Trub1Q8C0D0 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trub1Q8C0D0 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
Trub1Q8C0D0 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC10.55□□□□□ -0.72
Trub1Q8C0D0 Gm12816-201ENSMUST00000118069 1212 ntBASIC10.55□□□□□ -0.72
Trub1Q8C0D0 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trub1Q8C0D0 Gm19166-201ENSMUST00000196041 1063 ntBASIC10.55□□□□□ -0.72
Trub1Q8C0D0 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC10.55□□□□□ -0.72
Trub1Q8C0D0 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC10.55□□□□□ -0.72
Trub1Q8C0D0 Eif3k-204ENSMUST00000208616 909 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trub1Q8C0D0 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC10.55□□□□□ -0.72
Trub1Q8C0D0 AC168279.1-201ENSMUST00000214611 382 ntBASIC10.55□□□□□ -0.72
Trub1Q8C0D0 Gm35239-201ENSMUST00000218346 487 ntTSL 3 BASIC10.55□□□□□ -0.72
Trub1Q8C0D0 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trub1Q8C0D0 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trub1Q8C0D0 Gm6564-201ENSMUST00000075377 619 ntBASIC10.55□□□□□ -0.72
Trub1Q8C0D0 Klk1b22-201ENSMUST00000077528 855 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trub1Q8C0D0 Sh2d6-201ENSMUST00000089687 1162 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Trub1Q8C0D0 Tubb5-201ENSMUST00000001566 2649 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trub1Q8C0D0 Fam83c-201ENSMUST00000029143 3972 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trub1Q8C0D0 Rbm10-204ENSMUST00000115374 3564 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trub1Q8C0D0 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC10.55□□□□□ -0.72
Trub1Q8C0D0 Etv1-204ENSMUST00000160701 1578 ntTSL 5 BASIC10.55□□□□□ -0.72
Trub1Q8C0D0 Mst1r-201ENSMUST00000035203 4722 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trub1Q8C0D0 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Trub1Q8C0D0 Gm12367-202ENSMUST00000146909 2105 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 95.7 ms