Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Gm21469-201ENSMUST00000193164 696 ntBASIC9.48□□□□□ -0.89
Spg11Q3UHA3 Gm21427-201ENSMUST00000193270 696 ntBASIC9.48□□□□□ -0.89
Spg11Q3UHA3 Gm35955-201ENSMUST00000193437 696 ntBASIC9.48□□□□□ -0.89
Spg11Q3UHA3 Gm31335-201ENSMUST00000193949 693 ntBASIC9.48□□□□□ -0.89
Spg11Q3UHA3 Gm20925-201ENSMUST00000193967 696 ntBASIC9.48□□□□□ -0.89
Spg11Q3UHA3 Gm33112-201ENSMUST00000193971 699 ntBASIC9.48□□□□□ -0.89
Spg11Q3UHA3 Gm21661-201ENSMUST00000194101 696 ntBASIC9.48□□□□□ -0.89
Spg11Q3UHA3 Gm21412-201ENSMUST00000194618 696 ntBASIC9.48□□□□□ -0.89
Spg11Q3UHA3 Gm38016-201ENSMUST00000194806 693 ntBASIC9.48□□□□□ -0.89
Spg11Q3UHA3 Gm21763-201ENSMUST00000195140 696 ntBASIC9.48□□□□□ -0.89
Spg11Q3UHA3 Gm21890-201ENSMUST00000195190 696 ntBASIC9.48□□□□□ -0.89
Spg11Q3UHA3 Gm21350-201ENSMUST00000195678 696 ntBASIC9.48□□□□□ -0.89
Spg11Q3UHA3 Gm38094-201ENSMUST00000195864 2978 ntBASIC9.48□□□□□ -0.89
Spg11Q3UHA3 Gm4257-201ENSMUST00000222877 513 ntBASIC9.48□□□□□ -0.89
Spg11Q3UHA3 AC124484.1-201ENSMUST00000223212 652 ntBASIC9.48□□□□□ -0.89
Spg11Q3UHA3 CT025603.2-201ENSMUST00000224369 484 ntBASIC9.48□□□□□ -0.89
Spg11Q3UHA3 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Spg11Q3UHA3 Rpl21-ps12-201ENSMUST00000080061 480 ntBASIC9.48□□□□□ -0.89
Spg11Q3UHA3 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Spg11Q3UHA3 Gm18806-201ENSMUST00000207607 1775 ntBASIC9.48□□□□□ -0.89
Spg11Q3UHA3 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC9.48□□□□□ -0.89
Spg11Q3UHA3 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Spg11Q3UHA3 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Spg11Q3UHA3 AC167565.2-201ENSMUST00000227042 1870 ntBASIC9.48□□□□□ -0.89
Spg11Q3UHA3 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Spg11Q3UHA3 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Spg11Q3UHA3 Shank2-201ENSMUST00000097929 4418 ntTSL 5 BASIC9.48□□□□□ -0.89
Spg11Q3UHA3 Hyal2-206ENSMUST00000195681 2968 ntBASIC9.48□□□□□ -0.89
Spg11Q3UHA3 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Spg11Q3UHA3 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Spg11Q3UHA3 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Spg11Q3UHA3 Anxa6-202ENSMUST00000108883 2489 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Spg11Q3UHA3 Gm10390-202ENSMUST00000181905 4269 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Spg11Q3UHA3 Gm35722-201ENSMUST00000218270 1625 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Spg11Q3UHA3 D630003M21Rik-203ENSMUST00000169335 3457 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Spg11Q3UHA3 Slc17a3-203ENSMUST00000110422 1764 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Spg11Q3UHA3 Tcl1b2-202ENSMUST00000142230 851 ntTSL 5 BASIC9.47□□□□□ -0.89
Spg11Q3UHA3 Glmp-207ENSMUST00000176425 960 ntTSL 5 BASIC9.47□□□□□ -0.89
Spg11Q3UHA3 Gm45756-201ENSMUST00000212491 407 ntBASIC9.47□□□□□ -0.89
Spg11Q3UHA3 Gm5951-201ENSMUST00000220283 504 ntBASIC9.47□□□□□ -0.89
Spg11Q3UHA3 AC164315.1-202ENSMUST00000226723 657 ntBASIC9.47□□□□□ -0.89
Spg11Q3UHA3 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Spg11Q3UHA3 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Spg11Q3UHA3 Tcl1-201ENSMUST00000041316 1398 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Spg11Q3UHA3 9430064I24Rik-201ENSMUST00000206516 2669 ntBASIC9.47□□□□□ -0.89
Spg11Q3UHA3 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Spg11Q3UHA3 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Spg11Q3UHA3 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Spg11Q3UHA3 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Spg11Q3UHA3 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Spg11Q3UHA3 Ccdc146-201ENSMUST00000030552 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Spg11Q3UHA3 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Spg11Q3UHA3 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Spg11Q3UHA3 AC160550.2-202ENSMUST00000227812 1861 ntBASIC9.47□□□□□ -0.89
Spg11Q3UHA3 Gemin8-201ENSMUST00000056410 1862 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Spg11Q3UHA3 Gtf2h3-201ENSMUST00000031333 2672 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Spg11Q3UHA3 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Spg11Q3UHA3 Gpr160-201ENSMUST00000046748 1977 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Spg11Q3UHA3 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Spg11Q3UHA3 Gm33858-201ENSMUST00000216918 1411 ntTSL 5 BASIC9.47□□□□□ -0.89
Spg11Q3UHA3 Olfr271-ps1-201ENSMUST00000121614 952 ntBASIC9.47□□□□□ -0.89
Spg11Q3UHA3 Gm12738-201ENSMUST00000122349 536 ntBASIC9.47□□□□□ -0.89
Spg11Q3UHA3 Gm6236-201ENSMUST00000193785 1009 ntBASIC9.47□□□□□ -0.89
Spg11Q3UHA3 Gm42558-201ENSMUST00000200982 265 ntBASIC9.47□□□□□ -0.89
Spg11Q3UHA3 Gm45014-201ENSMUST00000207657 405 ntTSL 3 BASIC9.47□□□□□ -0.89
Spg11Q3UHA3 2310003N18Rik-201ENSMUST00000215655 458 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Spg11Q3UHA3 Olfr271-ps1-202ENSMUST00000217546 852 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Spg11Q3UHA3 Olfr5-201ENSMUST00000086318 1044 ntAPPRIS P1 TSL 3 BASIC9.47□□□□□ -0.89
Spg11Q3UHA3 Gm20642-201ENSMUST00000177185 1512 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Spg11Q3UHA3 Pcdh20-202ENSMUST00000192557 3362 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Spg11Q3UHA3 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Spg11Q3UHA3 Txk-203ENSMUST00000197313 2190 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Spg11Q3UHA3 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Spg11Q3UHA3 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Spg11Q3UHA3 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC9.47□□□□□ -0.89
Spg11Q3UHA3 Gm26586-201ENSMUST00000181918 1745 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Spg11Q3UHA3 Ttc23-203ENSMUST00000107471 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Spg11Q3UHA3 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Spg11Q3UHA3 Gprc5d-201ENSMUST00000032327 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Spg11Q3UHA3 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Spg11Q3UHA3 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC9.47□□□□□ -0.89
Spg11Q3UHA3 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Spg11Q3UHA3 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC9.47□□□□□ -0.89
Spg11Q3UHA3 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
Spg11Q3UHA3 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Spg11Q3UHA3 Coq8a-208ENSMUST00000160879 561 ntTSL 5 BASIC9.46□□□□□ -0.89
Spg11Q3UHA3 Siglech-208ENSMUST00000173835 833 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Spg11Q3UHA3 Gm28199-201ENSMUST00000187127 619 ntTSL 3 BASIC9.46□□□□□ -0.89
Spg11Q3UHA3 Gm4430-202ENSMUST00000193902 1041 ntBASIC9.46□□□□□ -0.89
Spg11Q3UHA3 Gm37955-201ENSMUST00000195098 212 ntBASIC9.46□□□□□ -0.89
Spg11Q3UHA3 Gm42599-201ENSMUST00000201308 469 ntBASIC9.46□□□□□ -0.89
Spg11Q3UHA3 Gm42726-201ENSMUST00000202274 1286 ntTSL 5 BASIC9.46□□□□□ -0.89
Spg11Q3UHA3 Gm36495-201ENSMUST00000221201 684 ntTSL 5 BASIC9.46□□□□□ -0.89
Spg11Q3UHA3 1810011H11Rik-202ENSMUST00000227060 496 ntBASIC9.46□□□□□ -0.89
Spg11Q3UHA3 AC107453.3-201ENSMUST00000228205 639 ntBASIC9.46□□□□□ -0.89
Spg11Q3UHA3 Smim4-201ENSMUST00000049732 311 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.89
Spg11Q3UHA3 Sprr1a-201ENSMUST00000054599 806 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Spg11Q3UHA3 Glt8d2-202ENSMUST00000065815 1240 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Spg11Q3UHA3 Gm43482-201ENSMUST00000202797 1861 ntBASIC9.46□□□□□ -0.89
Spg11Q3UHA3 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms