Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 Atp13a4-201ENSMUST00000039090 2878 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Ddx6P54823 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ddx6P54823 Nbdy-204ENSMUST00000185492 1346 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ddx6P54823 Gstm3-201ENSMUST00000004136 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ddx6P54823 4930578C19Rik-201ENSMUST00000044188 1896 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ddx6P54823 Hsf2-204ENSMUST00000220042 2430 ntTSL 5 BASIC10.48□□□□□ -0.73
Ddx6P54823 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ddx6P54823 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ddx6P54823 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Ddx6P54823 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC10.48□□□□□ -0.73
Ddx6P54823 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC10.48□□□□□ -0.73
Ddx6P54823 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ddx6P54823 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Ddx6P54823 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Ddx6P54823 Gm5310-201ENSMUST00000197861 1511 ntBASIC10.48□□□□□ -0.73
Ddx6P54823 Svil-211ENSMUST00000143254 6594 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Ddx6P54823 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ddx6P54823 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC10.48□□□□□ -0.73
Ddx6P54823 Helz-202ENSMUST00000100305 5953 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ddx6P54823 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ddx6P54823 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC10.48□□□□□ -0.73
Ddx6P54823 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ddx6P54823 Ldb3-205ENSMUST00000090040 4981 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ddx6P54823 5830473C10Rik-202ENSMUST00000200765 1691 ntTSL 5 BASIC10.47□□□□□ -0.73
Ddx6P54823 Mepe-201ENSMUST00000066207 1682 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ddx6P54823 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Ddx6P54823 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Ddx6P54823 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ddx6P54823 Sfmbt2-202ENSMUST00000114861 1813 ntTSL 5 BASIC10.47□□□□□ -0.73
Ddx6P54823 Cfap100-201ENSMUST00000062750 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ddx6P54823 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ddx6P54823 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ddx6P54823 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Ddx6P54823 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ddx6P54823 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC10.47□□□□□ -0.73
Ddx6P54823 Ogfod1-202ENSMUST00000093301 5141 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Ddx6P54823 Zfp74-204ENSMUST00000108212 2060 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Ddx6P54823 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC10.47□□□□□ -0.73
Ddx6P54823 Gm12047-201ENSMUST00000117561 944 ntBASIC10.47□□□□□ -0.73
Ddx6P54823 Gm15476-201ENSMUST00000118247 1191 ntBASIC10.47□□□□□ -0.73
Ddx6P54823 Gm12637-201ENSMUST00000130501 368 ntTSL 3 BASIC10.47□□□□□ -0.73
Ddx6P54823 2810433D01Rik-202ENSMUST00000154798 1045 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Ddx6P54823 Rsl24d1-203ENSMUST00000165177 597 ntTSL 3 BASIC10.47□□□□□ -0.73
Ddx6P54823 Gm8955-201ENSMUST00000182945 1008 ntBASIC10.47□□□□□ -0.73
Ddx6P54823 Gm27953-201ENSMUST00000185171 143 ntBASIC10.47□□□□□ -0.73
Ddx6P54823 Gm37020-201ENSMUST00000195303 992 ntBASIC10.47□□□□□ -0.73
Ddx6P54823 Gm37963-201ENSMUST00000195351 613 ntTSL 3 BASIC10.47□□□□□ -0.73
Ddx6P54823 4933430L12Rik-201ENSMUST00000206788 1194 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Ddx6P54823 Cryab-206ENSMUST00000217475 1117 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ddx6P54823 Tnfrsf14-205ENSMUST00000219534 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ddx6P54823 Htr1b-201ENSMUST00000051005 1273 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Ddx6P54823 Gm23458-201ENSMUST00000083257 169 ntBASIC10.47□□□□□ -0.73
Ddx6P54823 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Ddx6P54823 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ddx6P54823 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ddx6P54823 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ddx6P54823 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ddx6P54823 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ddx6P54823 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC10.47□□□□□ -0.73
Ddx6P54823 Calr4-201ENSMUST00000030285 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ddx6P54823 Nrf1-203ENSMUST00000069831 1625 ntTSL 5 BASIC10.47□□□□□ -0.73
Ddx6P54823 Nphs1-203ENSMUST00000126297 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ddx6P54823 Papss1-206ENSMUST00000200527 2811 ntTSL 5 BASIC10.47□□□□□ -0.73
Ddx6P54823 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC10.47□□□□□ -0.73
Ddx6P54823 Ap1m2-201ENSMUST00000003397 1706 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ddx6P54823 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ddx6P54823 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC10.47□□□□□ -0.73
Ddx6P54823 Nrap-202ENSMUST00000073536 5501 ntAPPRIS P4 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ddx6P54823 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.73
Ddx6P54823 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ddx6P54823 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC10.46□□□□□ -0.73
Ddx6P54823 Gm16499-201ENSMUST00000204648 2065 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Ddx6P54823 Mllt10-201ENSMUST00000028076 4917 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ddx6P54823 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Ddx6P54823 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC10.46□□□□□ -0.73
Ddx6P54823 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Ddx6P54823 Gm38025-201ENSMUST00000193926 2308 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Ddx6P54823 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Ddx6P54823 Ybey-201ENSMUST00000049185 4522 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ddx6P54823 Tom1l2-203ENSMUST00000093048 4864 ntTSL 5 BASIC10.46□□□□□ -0.73
Ddx6P54823 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ddx6P54823 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Ddx6P54823 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ddx6P54823 Tomm5-203ENSMUST00000107809 738 ntTSL 3 BASIC10.46□□□□□ -0.73
Ddx6P54823 Rpain-202ENSMUST00000108529 282 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Ddx6P54823 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ddx6P54823 Gm5054-201ENSMUST00000119351 453 ntBASIC10.46□□□□□ -0.73
Ddx6P54823 Gm15798-201ENSMUST00000120082 408 ntBASIC10.46□□□□□ -0.73
Ddx6P54823 Rps9-205ENSMUST00000126562 896 ntTSL 2 BASIC10.46□□□□□ -0.73
Ddx6P54823 Gm28309-201ENSMUST00000136302 623 ntTSL 5 BASIC10.46□□□□□ -0.73
Ddx6P54823 Gm13191-201ENSMUST00000136489 416 ntTSL 3 BASIC10.46□□□□□ -0.73
Ddx6P54823 A630023P12Rik-203ENSMUST00000141532 638 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Ddx6P54823 Siglech-208ENSMUST00000173835 833 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Ddx6P54823 Mir3091-201ENSMUST00000175086 76 ntBASIC10.46□□□□□ -0.73
Ddx6P54823 Gm3898-201ENSMUST00000180221 613 ntTSL 5 BASIC10.46□□□□□ -0.73
Ddx6P54823 4931431B13Rik-202ENSMUST00000205646 473 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Ddx6P54823 Gm5130-201ENSMUST00000210233 959 ntBASIC10.46□□□□□ -0.73
Ddx6P54823 AC134537.1-201ENSMUST00000219205 265 ntBASIC10.46□□□□□ -0.73
Ddx6P54823 AC153512.3-201ENSMUST00000220426 662 ntTSL 3 BASIC10.46□□□□□ -0.73
Ddx6P54823 Pgk1-rs7-201ENSMUST00000085735 1255 ntBASIC10.46□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms