Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC9.79□□□□□ -0.84
Cdx2P43241 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC9.79□□□□□ -0.84
Cdx2P43241 Lyn-201ENSMUST00000041377 3463 ntAPPRIS ALT1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cdx2P43241 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Cdx2P43241 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cdx2P43241 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cdx2P43241 St6galnac4-201ENSMUST00000102818 3626 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cdx2P43241 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Cdx2P43241 Gm38271-201ENSMUST00000192296 1603 ntBASIC9.78□□□□□ -0.84
Cdx2P43241 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Cdx2P43241 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cdx2P43241 Pdgfd-202ENSMUST00000168039 1795 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cdx2P43241 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Cdx2P43241 Gm38025-201ENSMUST00000193926 2308 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Cdx2P43241 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cdx2P43241 2700038G22Rik-201ENSMUST00000181574 1375 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Cdx2P43241 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cdx2P43241 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Cdx2P43241 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC9.78□□□□□ -0.84
Cdx2P43241 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cdx2P43241 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC9.78□□□□□ -0.84
Cdx2P43241 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Cdx2P43241 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cdx2P43241 Sectm1a-201ENSMUST00000026162 1692 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cdx2P43241 Cyp2d9-201ENSMUST00000089129 1651 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cdx2P43241 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cdx2P43241 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Cdx2P43241 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cdx2P43241 Gm14227-201ENSMUST00000119431 629 ntBASIC9.78□□□□□ -0.84
Cdx2P43241 Gm11493-201ENSMUST00000134567 566 ntTSL 3 BASIC9.78□□□□□ -0.84
Cdx2P43241 Gm15351-202ENSMUST00000150686 271 ntTSL 3 BASIC9.78□□□□□ -0.84
Cdx2P43241 Gm23555-201ENSMUST00000157815 135 ntBASIC9.78□□□□□ -0.84
Cdx2P43241 Csta1-202ENSMUST00000161638 422 ntTSL 3 BASIC9.78□□□□□ -0.84
Cdx2P43241 Baat-202ENSMUST00000166036 1263 ntAPPRIS P1 TSL 3 BASIC9.78□□□□□ -0.84
Cdx2P43241 Gm7138-201ENSMUST00000167669 693 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Cdx2P43241 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC9.78□□□□□ -0.84
Cdx2P43241 Gm26241-201ENSMUST00000174944 101 ntBASIC9.78□□□□□ -0.84
Cdx2P43241 Gm23976-201ENSMUST00000175001 101 ntBASIC9.78□□□□□ -0.84
Cdx2P43241 Gm22463-201ENSMUST00000175274 101 ntBASIC9.78□□□□□ -0.84
Cdx2P43241 Gm22547-201ENSMUST00000175281 101 ntBASIC9.78□□□□□ -0.84
Cdx2P43241 Gm22913-201ENSMUST00000175297 101 ntBASIC9.78□□□□□ -0.84
Cdx2P43241 Gm23282-201ENSMUST00000175306 101 ntBASIC9.78□□□□□ -0.84
Cdx2P43241 Gm25972-201ENSMUST00000175374 101 ntBASIC9.78□□□□□ -0.84
Cdx2P43241 Gm22414-201ENSMUST00000175466 101 ntBASIC9.78□□□□□ -0.84
Cdx2P43241 Gm26235-201ENSMUST00000175533 101 ntBASIC9.78□□□□□ -0.84
Cdx2P43241 Gm25084-201ENSMUST00000175556 101 ntBASIC9.78□□□□□ -0.84
Cdx2P43241 Gm24973-201ENSMUST00000175588 101 ntBASIC9.78□□□□□ -0.84
Cdx2P43241 Gm23292-201ENSMUST00000175618 101 ntBASIC9.78□□□□□ -0.84
Cdx2P43241 Gm23646-201ENSMUST00000178119 101 ntBASIC9.78□□□□□ -0.84
Cdx2P43241 Gm24643-201ENSMUST00000178305 101 ntBASIC9.78□□□□□ -0.84
Cdx2P43241 Gm24302-201ENSMUST00000178350 101 ntBASIC9.78□□□□□ -0.84
Cdx2P43241 Gm26386-201ENSMUST00000178407 101 ntBASIC9.78□□□□□ -0.84
Cdx2P43241 Gm25458-201ENSMUST00000178981 101 ntBASIC9.78□□□□□ -0.84
Cdx2P43241 Gm22825-201ENSMUST00000179444 101 ntBASIC9.78□□□□□ -0.84
Cdx2P43241 Gm26679-201ENSMUST00000181685 659 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Cdx2P43241 Gm29617-201ENSMUST00000185730 610 ntBASIC9.78□□□□□ -0.84
Cdx2P43241 Ighv1-8-201ENSMUST00000192236 293 ntBASIC9.78□□□□□ -0.84
Cdx2P43241 Gm9523-201ENSMUST00000199146 1159 ntBASIC9.78□□□□□ -0.84
Cdx2P43241 Gm43965-201ENSMUST00000203779 789 ntBASIC9.78□□□□□ -0.84
Cdx2P43241 Gm31378-201ENSMUST00000213538 267 ntTSL 5 BASIC9.78□□□□□ -0.84
Cdx2P43241 Gm46189-201ENSMUST00000219395 644 ntTSL 3 BASIC9.78□□□□□ -0.84
Cdx2P43241 Gm8768-201ENSMUST00000220020 826 ntBASIC9.78□□□□□ -0.84
Cdx2P43241 AC154766.1-201ENSMUST00000226550 936 ntBASIC9.78□□□□□ -0.84
Cdx2P43241 AC140393.4-201ENSMUST00000226994 765 ntBASIC9.78□□□□□ -0.84
Cdx2P43241 AC124555.1-201ENSMUST00000227051 880 ntBASIC9.78□□□□□ -0.84
Cdx2P43241 Fibp-201ENSMUST00000025847 1215 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Cdx2P43241 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cdx2P43241 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Cdx2P43241 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cdx2P43241 Gm5910-201ENSMUST00000211819 1746 ntBASIC9.78□□□□□ -0.84
Cdx2P43241 Epb41-202ENSMUST00000054917 4948 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Cdx2P43241 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cdx2P43241 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Cdx2P43241 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Cdx2P43241 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cdx2P43241 BC051665-201ENSMUST00000026078 1348 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cdx2P43241 Lypd4-201ENSMUST00000079306 1345 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cdx2P43241 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Cdx2P43241 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cdx2P43241 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cdx2P43241 AC154528.2-201ENSMUST00000228432 3023 ntBASIC9.77□□□□□ -0.84
Cdx2P43241 Adgre5-202ENSMUST00000075843 3000 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.84
Cdx2P43241 Mei4-203ENSMUST00000189832 2578 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Cdx2P43241 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Cdx2P43241 Gm5092-201ENSMUST00000188185 1675 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Cdx2P43241 C130071C03Rik-203ENSMUST00000182788 1368 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Cdx2P43241 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.84
Cdx2P43241 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Cdx2P43241 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC9.77□□□□□ -0.84
Cdx2P43241 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Cdx2P43241 Gm5878-201ENSMUST00000113802 4643 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Cdx2P43241 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cdx2P43241 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cdx2P43241 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Cdx2P43241 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC9.77□□□□□ -0.85
Cdx2P43241 Prrg3-201ENSMUST00000048790 5931 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cdx2P43241 Stxbp5l-206ENSMUST00000114787 4394 ntAPPRIS P3 TSL 5 BASIC9.77□□□□□ -0.85
Cdx2P43241 AC242690.1-202ENSMUST00000214616 1742 ntTSL 5 BASIC9.77□□□□□ -0.85
Cdx2P43241 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cdx2P43241 Spats2l-206ENSMUST00000167085 3929 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms