Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Pibf1-201ENSMUST00000022650 2797 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Trub1Q8C0D0 Sun1-204ENSMUST00000110882 2454 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Trub1Q8C0D0 Gm13694-201ENSMUST00000178533 2493 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Trub1Q8C0D0 Gm13693-201ENSMUST00000178960 2493 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Trub1Q8C0D0 Gm13698-202ENSMUST00000179192 2493 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Trub1Q8C0D0 Gm13696-202ENSMUST00000180347 2493 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Trub1Q8C0D0 Gm13691-201ENSMUST00000099947 2493 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Trub1Q8C0D0 Gm13697-201ENSMUST00000099948 2493 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Trub1Q8C0D0 Gm13695-201ENSMUST00000099951 2493 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Trub1Q8C0D0 Gm20735-201ENSMUST00000212077 1979 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trub1Q8C0D0 Tgfbrap1-201ENSMUST00000095014 5607 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trub1Q8C0D0 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Trub1Q8C0D0 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trub1Q8C0D0 Hspd1-ps4-201ENSMUST00000121815 1668 ntBASIC10.58□□□□□ -0.72
Trub1Q8C0D0 Chad-201ENSMUST00000040418 1680 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trub1Q8C0D0 Tmbim7-201ENSMUST00000014673 1552 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trub1Q8C0D0 Mapk1ip1-202ENSMUST00000118810 1350 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trub1Q8C0D0 Snora68-201ENSMUST00000104375 131 ntBASIC10.58□□□□□ -0.72
Trub1Q8C0D0 Gm5148-203ENSMUST00000108105 1282 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trub1Q8C0D0 Srp14-202ENSMUST00000110862 587 ntTSL 2 BASIC10.58□□□□□ -0.72
Trub1Q8C0D0 Gm11996-201ENSMUST00000117538 915 ntBASIC10.58□□□□□ -0.72
Trub1Q8C0D0 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC10.58□□□□□ -0.72
Trub1Q8C0D0 Gm45591-201ENSMUST00000129058 843 ntTSL 3 BASIC10.58□□□□□ -0.72
Trub1Q8C0D0 Gm5860-201ENSMUST00000137810 1028 ntTSL 2 BASIC10.58□□□□□ -0.72
Trub1Q8C0D0 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC10.58□□□□□ -0.72
Trub1Q8C0D0 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trub1Q8C0D0 Gm24352-201ENSMUST00000158966 125 ntBASIC10.58□□□□□ -0.72
Trub1Q8C0D0 Gm17214-201ENSMUST00000164501 541 ntBASIC10.58□□□□□ -0.72
Trub1Q8C0D0 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC10.58□□□□□ -0.72
Trub1Q8C0D0 Ighv2-1-201ENSMUST00000170946 353 ntBASIC10.58□□□□□ -0.72
Trub1Q8C0D0 Tcl1-203ENSMUST00000175652 535 ntTSL 2 BASIC10.58□□□□□ -0.72
Trub1Q8C0D0 Gm27203-201ENSMUST00000183677 307 ntBASIC10.58□□□□□ -0.72
Trub1Q8C0D0 Gm18894-201ENSMUST00000198794 694 ntBASIC10.58□□□□□ -0.72
Trub1Q8C0D0 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trub1Q8C0D0 Ghrl-205ENSMUST00000204163 447 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trub1Q8C0D0 Gm44709-201ENSMUST00000207649 448 ntTSL 5 BASIC10.58□□□□□ -0.72
Trub1Q8C0D0 Gm36862-204ENSMUST00000223365 642 ntTSL 3 BASIC10.58□□□□□ -0.72
Trub1Q8C0D0 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trub1Q8C0D0 Dmtf1-201ENSMUST00000071921 3806 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trub1Q8C0D0 Proca1-202ENSMUST00000078099 1254 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trub1Q8C0D0 Gm5449-201ENSMUST00000081132 357 ntBASIC10.58□□□□□ -0.72
Trub1Q8C0D0 Gm25201-201ENSMUST00000083093 170 ntBASIC10.58□□□□□ -0.72
Trub1Q8C0D0 Gm10238-201ENSMUST00000089689 408 ntBASIC10.58□□□□□ -0.72
Trub1Q8C0D0 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trub1Q8C0D0 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trub1Q8C0D0 Aasdhppt-201ENSMUST00000051589 2843 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trub1Q8C0D0 Stx8-201ENSMUST00000021285 4394 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trub1Q8C0D0 Gm9220-201ENSMUST00000190721 2544 ntBASIC10.58□□□□□ -0.72
Trub1Q8C0D0 Stat5a-201ENSMUST00000004145 3888 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trub1Q8C0D0 Wdr37-212ENSMUST00000176922 3780 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trub1Q8C0D0 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trub1Q8C0D0 Gsdmc3-203ENSMUST00000190682 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trub1Q8C0D0 Btn2a2-204ENSMUST00000223877 2109 ntAPPRIS ALT2 BASIC10.58□□□□□ -0.72
Trub1Q8C0D0 AC131081.1-201ENSMUST00000219535 1736 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trub1Q8C0D0 Rbm3-201ENSMUST00000040010 2792 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trub1Q8C0D0 Ccdc40-201ENSMUST00000035935 4979 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trub1Q8C0D0 Capn15-204ENSMUST00000212149 4555 ntAPPRIS P3 TSL 5 BASIC10.58□□□□□ -0.72
Trub1Q8C0D0 Prdx6-202ENSMUST00000071718 2387 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trub1Q8C0D0 Zfp775-201ENSMUST00000061720 4083 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trub1Q8C0D0 Sez6l-205ENSMUST00000212480 5857 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Trub1Q8C0D0 4930447F24Rik-201ENSMUST00000194140 1341 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trub1Q8C0D0 Ddr1-203ENSMUST00000117301 3874 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trub1Q8C0D0 Acsm2-201ENSMUST00000084647 2051 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trub1Q8C0D0 D630003M21Rik-202ENSMUST00000103121 4521 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trub1Q8C0D0 Clasp2-201ENSMUST00000111838 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trub1Q8C0D0 Gtf2i-223ENSMUST00000174513 4021 ntAPPRIS ALT2 TSL 2 BASIC10.57□□□□□ -0.72
Trub1Q8C0D0 Kit-201ENSMUST00000005815 5214 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trub1Q8C0D0 Pex5-203ENSMUST00000112530 3051 ntTSL 5 BASIC10.57□□□□□ -0.72
Trub1Q8C0D0 Trem1-201ENSMUST00000048782 2993 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trub1Q8C0D0 Sh3bgrl-201ENSMUST00000033598 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trub1Q8C0D0 Rsrc2-208ENSMUST00000182309 1595 ntTSL 5 BASIC10.57□□□□□ -0.72
Trub1Q8C0D0 Acnat1-201ENSMUST00000095086 1499 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trub1Q8C0D0 Gm45089-201ENSMUST00000208082 2040 ntBASIC10.57□□□□□ -0.72
Trub1Q8C0D0 Prss23os-202ENSMUST00000179361 1362 ntBASIC10.57□□□□□ -0.72
Trub1Q8C0D0 Atf3-203ENSMUST00000195117 1906 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trub1Q8C0D0 Gm42714-201ENSMUST00000202063 1364 ntBASIC10.57□□□□□ -0.72
Trub1Q8C0D0 4930539E08Rik-201ENSMUST00000062357 4597 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trub1Q8C0D0 Sf3a3-201ENSMUST00000030734 1820 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trub1Q8C0D0 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Trub1Q8C0D0 Unc119-202ENSMUST00000100755 933 ntTSL 2 BASIC10.57□□□□□ -0.72
Trub1Q8C0D0 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC10.57□□□□□ -0.72
Trub1Q8C0D0 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Trub1Q8C0D0 Ins2-202ENSMUST00000105930 583 ntTSL 3 BASIC10.57□□□□□ -0.72
Trub1Q8C0D0 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC10.57□□□□□ -0.72
Trub1Q8C0D0 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trub1Q8C0D0 Klra9-202ENSMUST00000112032 1279 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trub1Q8C0D0 Gm16459-201ENSMUST00000121443 686 ntBASIC10.57□□□□□ -0.72
Trub1Q8C0D0 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC10.57□□□□□ -0.72
Trub1Q8C0D0 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC10.57□□□□□ -0.72
Trub1Q8C0D0 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC10.57□□□□□ -0.72
Trub1Q8C0D0 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trub1Q8C0D0 Gm23218-201ENSMUST00000158124 276 ntBASIC10.57□□□□□ -0.72
Trub1Q8C0D0 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trub1Q8C0D0 C430039J16Rik-201ENSMUST00000181148 658 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trub1Q8C0D0 1700052H01Rik-201ENSMUST00000196142 717 ntTSL 3 BASIC10.57□□□□□ -0.72
Trub1Q8C0D0 Gm44647-201ENSMUST00000207402 428 ntBASIC10.57□□□□□ -0.72
Trub1Q8C0D0 Gm18706-201ENSMUST00000210053 1066 ntBASIC10.57□□□□□ -0.72
Trub1Q8C0D0 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC10.57□□□□□ -0.72
Trub1Q8C0D0 Gm9619-201ENSMUST00000211587 762 ntBASIC10.57□□□□□ -0.72
Trub1Q8C0D0 Gm7344-201ENSMUST00000212122 1222 ntBASIC10.57□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms