Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Mir692-3-201ENSMUST00000102079 109 ntBASIC10.24□□□□□ -0.77
Pcdh19Q80TF3 Mir692-2-201ENSMUST00000102081 109 ntBASIC10.24□□□□□ -0.77
Pcdh19Q80TF3 Pex5l-203ENSMUST00000108221 1187 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Pcdh19Q80TF3 Slc25a21-202ENSMUST00000110680 918 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Pcdh19Q80TF3 Gm3676-201ENSMUST00000111869 899 ntAPPRIS P1 TSL 3 BASIC10.24□□□□□ -0.77
Pcdh19Q80TF3 Gm11411-201ENSMUST00000117951 719 ntBASIC10.24□□□□□ -0.77
Pcdh19Q80TF3 Gm11824-201ENSMUST00000120191 846 ntBASIC10.24□□□□□ -0.77
Pcdh19Q80TF3 4930589P08Rik-201ENSMUST00000129097 1084 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Pcdh19Q80TF3 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Pcdh19Q80TF3 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC10.24□□□□□ -0.77
Pcdh19Q80TF3 Ptpa-210ENSMUST00000136009 810 ntTSL 3 BASIC10.24□□□□□ -0.77
Pcdh19Q80TF3 Gm12916-201ENSMUST00000139012 948 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Pcdh19Q80TF3 Gm7805-201ENSMUST00000154348 448 ntBASIC10.24□□□□□ -0.77
Pcdh19Q80TF3 Gm25604-201ENSMUST00000158359 133 ntBASIC10.24□□□□□ -0.77
Pcdh19Q80TF3 Gm16538-201ENSMUST00000162407 442 ntTSL 2 BASIC10.24□□□□□ -0.77
Pcdh19Q80TF3 Atp5e-201ENSMUST00000016396 421 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pcdh19Q80TF3 Tex35-206ENSMUST00000187546 856 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Pcdh19Q80TF3 Gm28179-201ENSMUST00000188365 613 ntBASIC10.24□□□□□ -0.77
Pcdh19Q80TF3 Gm28079-206ENSMUST00000188554 1170 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Pcdh19Q80TF3 4930517L18Rik-201ENSMUST00000191880 482 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Pcdh19Q80TF3 Gm42617-201ENSMUST00000197640 1229 ntBASIC10.24□□□□□ -0.77
Pcdh19Q80TF3 Gm42779-201ENSMUST00000198807 406 ntBASIC10.24□□□□□ -0.77
Pcdh19Q80TF3 Gm9515-201ENSMUST00000200276 647 ntBASIC10.24□□□□□ -0.77
Pcdh19Q80TF3 Gm36028-202ENSMUST00000205931 1161 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Pcdh19Q80TF3 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC10.24□□□□□ -0.77
Pcdh19Q80TF3 AC154759.1-201ENSMUST00000224137 1159 ntBASIC10.24□□□□□ -0.77
Pcdh19Q80TF3 Prl7a1-203ENSMUST00000224852 1283 ntBASIC10.24□□□□□ -0.77
Pcdh19Q80TF3 AC139155.1-201ENSMUST00000226043 444 ntBASIC10.24□□□□□ -0.77
Pcdh19Q80TF3 AC154213.1-201ENSMUST00000228234 583 ntBASIC10.24□□□□□ -0.77
Pcdh19Q80TF3 Olfr1394-201ENSMUST00000052668 939 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Pcdh19Q80TF3 Prl7a1-201ENSMUST00000006659 940 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pcdh19Q80TF3 Gm9507-201ENSMUST00000095491 877 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Pcdh19Q80TF3 Gemin8-203ENSMUST00000096252 1039 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pcdh19Q80TF3 Celsr2-201ENSMUST00000090558 10598 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pcdh19Q80TF3 Baat-201ENSMUST00000043056 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pcdh19Q80TF3 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pcdh19Q80TF3 Ncmap-203ENSMUST00000105858 1616 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pcdh19Q80TF3 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Pcdh19Q80TF3 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Pcdh19Q80TF3 Gm42587-201ENSMUST00000198462 1981 ntBASIC10.24□□□□□ -0.77
Pcdh19Q80TF3 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC10.24□□□□□ -0.77
Pcdh19Q80TF3 AC154197.1-201ENSMUST00000225136 1382 ntBASIC10.24□□□□□ -0.77
Pcdh19Q80TF3 Gm45041-201ENSMUST00000207366 3108 ntBASIC10.24□□□□□ -0.77
Pcdh19Q80TF3 Clasp2-201ENSMUST00000111838 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pcdh19Q80TF3 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pcdh19Q80TF3 Spef2-203ENSMUST00000159368 1422 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Pcdh19Q80TF3 Clgn-201ENSMUST00000002259 3902 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pcdh19Q80TF3 Ctnnd1-206ENSMUST00000111675 5089 ntTSL 5 BASIC10.24□□□□□ -0.77
Pcdh19Q80TF3 Gm39464-201ENSMUST00000214091 2169 ntTSL 5 BASIC10.24□□□□□ -0.77
Pcdh19Q80TF3 Cspp1-201ENSMUST00000071087 4355 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pcdh19Q80TF3 Pms2-209ENSMUST00000148011 5482 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pcdh19Q80TF3 Gm37048-201ENSMUST00000194827 5578 ntBASIC10.23□□□□□ -0.77
Pcdh19Q80TF3 Plrg1-204ENSMUST00000150268 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pcdh19Q80TF3 Gm6727-201ENSMUST00000204102 1518 ntBASIC10.23□□□□□ -0.77
Pcdh19Q80TF3 Grk3-204ENSMUST00000197888 1938 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Pcdh19Q80TF3 Mak16-201ENSMUST00000033983 1902 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pcdh19Q80TF3 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC10.23□□□□□ -0.77
Pcdh19Q80TF3 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pcdh19Q80TF3 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Pcdh19Q80TF3 Cct3-201ENSMUST00000001452 1977 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pcdh19Q80TF3 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Pcdh19Q80TF3 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pcdh19Q80TF3 Trappc9-202ENSMUST00000089770 4047 ntAPPRIS P4 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pcdh19Q80TF3 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pcdh19Q80TF3 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC10.23□□□□□ -0.77
Pcdh19Q80TF3 Gm43980-201ENSMUST00000204899 1612 ntBASIC10.23□□□□□ -0.77
Pcdh19Q80TF3 Exosc9-201ENSMUST00000029269 1617 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pcdh19Q80TF3 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC10.23□□□□□ -0.77
Pcdh19Q80TF3 Gm37242-201ENSMUST00000191873 2085 ntBASIC10.23□□□□□ -0.77
Pcdh19Q80TF3 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pcdh19Q80TF3 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC10.23□□□□□ -0.77
Pcdh19Q80TF3 Defb48-201ENSMUST00000100493 445 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pcdh19Q80TF3 Ighv1-74-201ENSMUST00000103543 348 ntAPPRIS ALT2 BASIC10.23□□□□□ -0.77
Pcdh19Q80TF3 Tmem91-203ENSMUST00000108405 550 ntTSL 3 BASIC10.23□□□□□ -0.77
Pcdh19Q80TF3 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC10.23□□□□□ -0.77
Pcdh19Q80TF3 Zbp1-202ENSMUST00000109116 770 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Pcdh19Q80TF3 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC10.23□□□□□ -0.77
Pcdh19Q80TF3 Erg-209ENSMUST00000177450 1280 ntTSL 5 BASIC10.23□□□□□ -0.77
Pcdh19Q80TF3 Gal3st2b-201ENSMUST00000177958 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pcdh19Q80TF3 Gm37597-201ENSMUST00000191853 382 ntBASIC10.23□□□□□ -0.77
Pcdh19Q80TF3 Gm37533-201ENSMUST00000193848 545 ntBASIC10.23□□□□□ -0.77
Pcdh19Q80TF3 Gm37257-201ENSMUST00000194871 717 ntTSL 5 BASIC10.23□□□□□ -0.77
Pcdh19Q80TF3 Gm8920-201ENSMUST00000196153 924 ntBASIC10.23□□□□□ -0.77
Pcdh19Q80TF3 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Pcdh19Q80TF3 Gm19798-201ENSMUST00000201502 457 ntBASIC10.23□□□□□ -0.77
Pcdh19Q80TF3 Gm45310-201ENSMUST00000210436 275 ntBASIC10.23□□□□□ -0.77
Pcdh19Q80TF3 Gm14005-208ENSMUST00000223654 681 ntBASIC10.23□□□□□ -0.77
Pcdh19Q80TF3 AC105408.1-201ENSMUST00000227771 802 ntBASIC10.23□□□□□ -0.77
Pcdh19Q80TF3 Ebi3-201ENSMUST00000003274 1170 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pcdh19Q80TF3 Ascl3-201ENSMUST00000035372 700 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pcdh19Q80TF3 Proca1-202ENSMUST00000078099 1254 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pcdh19Q80TF3 Krtap3-3-201ENSMUST00000092700 736 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Pcdh19Q80TF3 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC10.23□□□□□ -0.77
Pcdh19Q80TF3 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pcdh19Q80TF3 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pcdh19Q80TF3 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pcdh19Q80TF3 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC10.23□□□□□ -0.77
Pcdh19Q80TF3 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pcdh19Q80TF3 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pcdh19Q80TF3 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms