Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Dytn-201ENSMUST00000090313 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vps54Q5SPW0 Rsrc2-208ENSMUST00000182309 1595 ntTSL 5 BASIC12.33□□□□□ -0.44
Vps54Q5SPW0 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Vps54Q5SPW0 Stat5a-201ENSMUST00000004145 3888 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vps54Q5SPW0 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vps54Q5SPW0 Bpifb2-201ENSMUST00000028983 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vps54Q5SPW0 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Vps54Q5SPW0 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Vps54Q5SPW0 Sfi1-202ENSMUST00000081318 3969 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vps54Q5SPW0 Exosc9-201ENSMUST00000029269 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vps54Q5SPW0 Mtbp-201ENSMUST00000022998 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vps54Q5SPW0 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Vps54Q5SPW0 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vps54Q5SPW0 Adam6a-201ENSMUST00000053086 2558 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Vps54Q5SPW0 Rdh16f1-201ENSMUST00000128247 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vps54Q5SPW0 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vps54Q5SPW0 Igsf11-202ENSMUST00000114706 1578 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vps54Q5SPW0 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vps54Q5SPW0 Gm11929-201ENSMUST00000118175 945 ntBASIC12.32□□□□□ -0.44
Vps54Q5SPW0 Sfi1-204ENSMUST00000118627 831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vps54Q5SPW0 Gm14997-201ENSMUST00000119232 636 ntBASIC12.32□□□□□ -0.44
Vps54Q5SPW0 Ak3l2-ps-201ENSMUST00000120282 672 ntBASIC12.32□□□□□ -0.44
Vps54Q5SPW0 Gm12000-201ENSMUST00000132007 629 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vps54Q5SPW0 Gm26356-201ENSMUST00000158217 283 ntBASIC12.32□□□□□ -0.44
Vps54Q5SPW0 Mok-204ENSMUST00000177224 551 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vps54Q5SPW0 Gm26725-201ENSMUST00000180652 1113 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vps54Q5SPW0 Gm17733-201ENSMUST00000181883 1048 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vps54Q5SPW0 Gm7627-201ENSMUST00000183205 999 ntBASIC12.32□□□□□ -0.44
Vps54Q5SPW0 Gm35299-201ENSMUST00000195865 421 ntTSL 3 BASIC12.32□□□□□ -0.44
Vps54Q5SPW0 Igkv2-116-201ENSMUST00000199327 362 ntBASIC12.32□□□□□ -0.44
Vps54Q5SPW0 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vps54Q5SPW0 E330011O21Rik-205ENSMUST00000211317 1062 ntTSL 5 BASIC12.32□□□□□ -0.44
Vps54Q5SPW0 Mt1-203ENSMUST00000212291 633 ntTSL 2 BASIC12.32□□□□□ -0.44
Vps54Q5SPW0 4930546C10Rik-201ENSMUST00000025428 363 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Vps54Q5SPW0 Rps3a3-201ENSMUST00000074680 795 ntBASIC12.32□□□□□ -0.44
Vps54Q5SPW0 Gm26440-201ENSMUST00000082591 129 ntBASIC12.32□□□□□ -0.44
Vps54Q5SPW0 Gm5148-202ENSMUST00000099128 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vps54Q5SPW0 Olfr1199-201ENSMUST00000099813 933 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Vps54Q5SPW0 Ssb-206ENSMUST00000166411 2088 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Vps54Q5SPW0 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vps54Q5SPW0 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Vps54Q5SPW0 AC153498.1-201ENSMUST00000219775 2722 ntBASIC12.32□□□□□ -0.44
Vps54Q5SPW0 Tcn2-206ENSMUST00000109992 1945 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Vps54Q5SPW0 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Vps54Q5SPW0 Sp100-201ENSMUST00000054279 1978 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vps54Q5SPW0 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vps54Q5SPW0 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Vps54Q5SPW0 Dync2li1-201ENSMUST00000025101 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vps54Q5SPW0 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vps54Q5SPW0 Nectin4-203ENSMUST00000111286 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vps54Q5SPW0 4632418H02Rik-201ENSMUST00000217287 2721 ntBASIC12.31□□□□□ -0.44
Vps54Q5SPW0 1700110I01Rik-202ENSMUST00000112812 1737 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Vps54Q5SPW0 Commd1-204ENSMUST00000159081 4508 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vps54Q5SPW0 Dcun1d4-203ENSMUST00000113558 4023 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Vps54Q5SPW0 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vps54Q5SPW0 Pla2g2d-201ENSMUST00000030528 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vps54Q5SPW0 Olfr874-201ENSMUST00000115004 933 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Vps54Q5SPW0 1810058I24Rik-201ENSMUST00000130875 690 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Vps54Q5SPW0 Ube4bos3-201ENSMUST00000155845 756 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Vps54Q5SPW0 Rab26-204ENSMUST00000176533 965 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Vps54Q5SPW0 Zfp572-201ENSMUST00000183674 1098 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Vps54Q5SPW0 Mir6366-201ENSMUST00000184472 82 ntBASIC12.31□□□□□ -0.44
Vps54Q5SPW0 1500015A07Rik-202ENSMUST00000184530 423 ntTSL 3 BASIC12.31□□□□□ -0.44
Vps54Q5SPW0 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC12.31□□□□□ -0.44
Vps54Q5SPW0 Gm5738-201ENSMUST00000206016 779 ntBASIC12.31□□□□□ -0.44
Vps54Q5SPW0 Gm45812-201ENSMUST00000212199 192 ntTSL 5 BASIC12.31□□□□□ -0.44
Vps54Q5SPW0 Hamp2-203ENSMUST00000217812 437 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vps54Q5SPW0 AC153512.3-201ENSMUST00000220426 662 ntTSL 3 BASIC12.31□□□□□ -0.44
Vps54Q5SPW0 AC165260.2-201ENSMUST00000225371 395 ntBASIC12.31□□□□□ -0.44
Vps54Q5SPW0 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vps54Q5SPW0 Cyp2d9-201ENSMUST00000089129 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vps54Q5SPW0 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vps54Q5SPW0 Cyp2b13-201ENSMUST00000005669 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vps54Q5SPW0 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Vps54Q5SPW0 Kcne3-202ENSMUST00000170954 1315 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vps54Q5SPW0 Tmem126b-201ENSMUST00000032843 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vps54Q5SPW0 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC12.31□□□□□ -0.44
Vps54Q5SPW0 Gm18262-201ENSMUST00000222560 1946 ntBASIC12.31□□□□□ -0.44
Vps54Q5SPW0 Gm38413-202ENSMUST00000198449 2348 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Vps54Q5SPW0 Elavl1-204ENSMUST00000209010 2317 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Vps54Q5SPW0 Ccdc15-202ENSMUST00000213633 3331 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Vps54Q5SPW0 Sec31b-201ENSMUST00000063632 3939 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Vps54Q5SPW0 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps54Q5SPW0 Vgll3-202ENSMUST00000227997 1383 ntBASIC12.3□□□□□ -0.44
Vps54Q5SPW0 Slx1b-203ENSMUST00000144897 3152 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps54Q5SPW0 Tro-201ENSMUST00000087253 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps54Q5SPW0 Cux1-207ENSMUST00000176216 2821 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Vps54Q5SPW0 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps54Q5SPW0 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps54Q5SPW0 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC12.3□□□□□ -0.44
Vps54Q5SPW0 Opalin-201ENSMUST00000087176 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps54Q5SPW0 Galntl5-201ENSMUST00000030778 1627 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps54Q5SPW0 Gm7061-201ENSMUST00000118127 1416 ntBASIC12.3□□□□□ -0.44
Vps54Q5SPW0 Plut-202ENSMUST00000174285 1444 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Vps54Q5SPW0 Ppp6r2-201ENSMUST00000088788 2887 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Vps54Q5SPW0 Zfp61-201ENSMUST00000077780 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps54Q5SPW0 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps54Q5SPW0 Gm37975-201ENSMUST00000195494 2099 ntBASIC12.3□□□□□ -0.44
Vps54Q5SPW0 Acsm2-201ENSMUST00000084647 2051 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Vps54Q5SPW0 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms