Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Trim63Q38HM4 Gm7029-201ENSMUST00000173226 450 ntBASIC8.4□□□□□ -1.06
Trim63Q38HM4 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC8.4□□□□□ -1.06
Trim63Q38HM4 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC8.4□□□□□ -1.06
Trim63Q38HM4 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC8.4□□□□□ -1.06
Trim63Q38HM4 Gm37350-201ENSMUST00000192782 313 ntTSL 5 BASIC8.4□□□□□ -1.06
Trim63Q38HM4 Gm38117-201ENSMUST00000194653 939 ntBASIC8.4□□□□□ -1.06
Trim63Q38HM4 Gm43058-201ENSMUST00000197645 625 ntBASIC8.4□□□□□ -1.06
Trim63Q38HM4 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Trim63Q38HM4 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC8.4□□□□□ -1.06
Trim63Q38HM4 Gm9111-201ENSMUST00000219394 709 ntBASIC8.4□□□□□ -1.06
Trim63Q38HM4 AC150560.1-201ENSMUST00000227731 1187 ntBASIC8.4□□□□□ -1.06
Trim63Q38HM4 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Trim63Q38HM4 Hmgb4-201ENSMUST00000053830 746 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Trim63Q38HM4 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Trim63Q38HM4 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Trim63Q38HM4 Zfp74-204ENSMUST00000108212 2060 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Trim63Q38HM4 Plrg1-204ENSMUST00000150268 1851 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Trim63Q38HM4 Rbpj-201ENSMUST00000037618 5459 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Trim63Q38HM4 Rrh-202ENSMUST00000171313 1759 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.07
Trim63Q38HM4 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Trim63Q38HM4 Sycp1-202ENSMUST00000196988 3189 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Trim63Q38HM4 Fam60a-209ENSMUST00000203164 2442 ntTSL 5 BASIC8.4□□□□□ -1.07
Trim63Q38HM4 5730422E09Rik-201ENSMUST00000180733 1740 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Trim63Q38HM4 Slc12a4-202ENSMUST00000116429 3755 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.07
Trim63Q38HM4 AC120425.1-201ENSMUST00000225213 2360 ntBASIC8.4□□□□□ -1.07
Trim63Q38HM4 Gm7208-202ENSMUST00000212442 1627 ntBASIC8.4□□□□□ -1.07
Trim63Q38HM4 Cnga3-201ENSMUST00000027288 3554 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.07
Trim63Q38HM4 Gm37125-201ENSMUST00000195877 1559 ntBASIC8.39□□□□□ -1.07
Trim63Q38HM4 Gm38155-201ENSMUST00000192285 2763 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Trim63Q38HM4 L3mbtl2-204ENSMUST00000172748 3368 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Trim63Q38HM4 Gm38275-201ENSMUST00000193293 1532 ntBASIC8.39□□□□□ -1.07
Trim63Q38HM4 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trim63Q38HM4 Fancl-201ENSMUST00000004120 2724 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trim63Q38HM4 Zscan30-202ENSMUST00000224144 1458 ntBASIC8.39□□□□□ -1.07
Trim63Q38HM4 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trim63Q38HM4 Optn-202ENSMUST00000114996 2614 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trim63Q38HM4 Ick-202ENSMUST00000044551 6560 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trim63Q38HM4 Thap2-201ENSMUST00000020346 3681 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Trim63Q38HM4 Sc5d-201ENSMUST00000052725 4787 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trim63Q38HM4 Clasp2-207ENSMUST00000214522 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trim63Q38HM4 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Trim63Q38HM4 Gm29326-201ENSMUST00000185541 2451 ntBASIC8.39□□□□□ -1.07
Trim63Q38HM4 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC8.39□□□□□ -1.07
Trim63Q38HM4 Pcx-201ENSMUST00000068004 4148 ntAPPRIS ALT1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trim63Q38HM4 Bzw2-201ENSMUST00000020856 1871 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trim63Q38HM4 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC8.39□□□□□ -1.07
Trim63Q38HM4 Gm16429-202ENSMUST00000201400 1848 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trim63Q38HM4 Gm7971-201ENSMUST00000086950 1848 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Trim63Q38HM4 Dgka-201ENSMUST00000026414 2834 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trim63Q38HM4 Gm37699-201ENSMUST00000194753 3338 ntBASIC8.39□□□□□ -1.07
Trim63Q38HM4 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC8.39□□□□□ -1.07
Trim63Q38HM4 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Trim63Q38HM4 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC8.39□□□□□ -1.07
Trim63Q38HM4 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC8.39□□□□□ -1.07
Trim63Q38HM4 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.07
Trim63Q38HM4 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Trim63Q38HM4 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trim63Q38HM4 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Trim63Q38HM4 Gm8343-201ENSMUST00000182705 994 ntBASIC8.39□□□□□ -1.07
Trim63Q38HM4 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC8.39□□□□□ -1.07
Trim63Q38HM4 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC8.39□□□□□ -1.07
Trim63Q38HM4 Gm29705-201ENSMUST00000212598 474 ntBASIC8.39□□□□□ -1.07
Trim63Q38HM4 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC8.39□□□□□ -1.07
Trim63Q38HM4 CT009757.1-201ENSMUST00000222801 738 ntTSL 5 BASIC8.39□□□□□ -1.07
Trim63Q38HM4 AC121542.2-201ENSMUST00000227529 400 ntBASIC8.39□□□□□ -1.07
Trim63Q38HM4 A430093F15Rik-201ENSMUST00000087947 985 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Trim63Q38HM4 AC158596.1-201ENSMUST00000217315 2265 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Trim63Q38HM4 Vmn1r-ps128-201ENSMUST00000121211 1739 ntBASIC8.39□□□□□ -1.07
Trim63Q38HM4 Gm36120-201ENSMUST00000214393 1734 ntTSL 5 BASIC8.39□□□□□ -1.07
Trim63Q38HM4 Thbs3-201ENSMUST00000029682 3190 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trim63Q38HM4 Gpn1-201ENSMUST00000076949 3144 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trim63Q38HM4 Ddx5-201ENSMUST00000021062 3559 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trim63Q38HM4 Zfp551-201ENSMUST00000080348 2591 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trim63Q38HM4 Gm45397-201ENSMUST00000209816 1600 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Trim63Q38HM4 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Trim63Q38HM4 Folh1-202ENSMUST00000107271 2516 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trim63Q38HM4 Igsf11-202ENSMUST00000114706 1578 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Trim63Q38HM4 Ddx6-201ENSMUST00000170489 6065 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Trim63Q38HM4 Gm43532-201ENSMUST00000199389 3816 ntBASIC8.39□□□□□ -1.07
Trim63Q38HM4 Atp5g1-204ENSMUST00000178611 4660 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trim63Q38HM4 Depdc5-202ENSMUST00000087897 8216 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Trim63Q38HM4 Ttc38-203ENSMUST00000146088 3749 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trim63Q38HM4 Olfr1350-202ENSMUST00000207221 1521 ntAPPRIS P1 TSL 3 BASIC8.39□□□□□ -1.07
Trim63Q38HM4 4930511J24Rik-201ENSMUST00000223541 1528 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Trim63Q38HM4 Limk2-203ENSMUST00000101642 3693 ntAPPRIS ALT1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trim63Q38HM4 Mut-201ENSMUST00000169611 3675 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trim63Q38HM4 Tnfaip8-212ENSMUST00000179937 2385 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Trim63Q38HM4 Gucy2d-203ENSMUST00000206435 3634 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Trim63Q38HM4 Harbi1-201ENSMUST00000090608 2308 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trim63Q38HM4 4930556L07Rik-201ENSMUST00000134422 1490 ntTSL 5 BASIC8.38□□□□□ -1.07
Trim63Q38HM4 Gm37651-201ENSMUST00000194679 1494 ntBASIC8.38□□□□□ -1.07
Trim63Q38HM4 Gm5315-201ENSMUST00000204430 1897 ntBASIC8.38□□□□□ -1.07
Trim63Q38HM4 AC160550.2-202ENSMUST00000227812 1861 ntBASIC8.38□□□□□ -1.07
Trim63Q38HM4 Pcsk2-201ENSMUST00000028905 4723 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trim63Q38HM4 Olfml2b-201ENSMUST00000046792 3095 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trim63Q38HM4 Gm7553-201ENSMUST00000185805 1426 ntBASIC8.38□□□□□ -1.07
Trim63Q38HM4 C130026L21Rik-204ENSMUST00000199587 1838 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Trim63Q38HM4 Zfp948-201ENSMUST00000088787 2612 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trim63Q38HM4 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC8.38□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms