Protein–RNA interactions for Protein: B2RUQ2

Usf3, Gene model 608, (NCBI), mousemouse

Predictions only

Length 2,221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf3B2RUQ2 Atf3-203ENSMUST00000195117 1906 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Usf3B2RUQ2 Fam161a-201ENSMUST00000058269 1927 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Usf3B2RUQ2 C230021G24Rik-201ENSMUST00000181196 3679 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Usf3B2RUQ2 Slc25a27-201ENSMUST00000024705 2687 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Usf3B2RUQ2 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Usf3B2RUQ2 Tom1l2-203ENSMUST00000093048 4864 ntTSL 5 BASIC8.64□□□□□ -1.03
Usf3B2RUQ2 Adig-202ENSMUST00000109484 488 ntTSL 2 BASIC8.64□□□□□ -1.03
Usf3B2RUQ2 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Usf3B2RUQ2 Lypla1-202ENSMUST00000115529 930 ntTSL 2 BASIC8.64□□□□□ -1.03
Usf3B2RUQ2 Gm5944-201ENSMUST00000118182 1001 ntBASIC8.64□□□□□ -1.03
Usf3B2RUQ2 Gm14616-201ENSMUST00000131690 314 ntTSL 3 BASIC8.64□□□□□ -1.03
Usf3B2RUQ2 Gm12056-201ENSMUST00000148364 1257 ntTSL 5 BASIC8.64□□□□□ -1.03
Usf3B2RUQ2 6820431F20Rik-201ENSMUST00000150051 936 ntBASIC8.64□□□□□ -1.03
Usf3B2RUQ2 1700019D03Rik-205ENSMUST00000190726 702 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Usf3B2RUQ2 1700019D03Rik-207ENSMUST00000191441 638 ntAPPRIS P1 TSL 3 BASIC8.64□□□□□ -1.03
Usf3B2RUQ2 Gm5865-201ENSMUST00000198713 637 ntBASIC8.64□□□□□ -1.03
Usf3B2RUQ2 Chac2-201ENSMUST00000020553 1018 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Usf3B2RUQ2 Gm42375-201ENSMUST00000206226 745 ntTSL 5 BASIC8.64□□□□□ -1.03
Usf3B2RUQ2 AC154461.1-201ENSMUST00000224207 1005 ntBASIC8.64□□□□□ -1.03
Usf3B2RUQ2 CT571271.1-201ENSMUST00000227071 670 ntBASIC8.64□□□□□ -1.03
Usf3B2RUQ2 CT010505.2-201ENSMUST00000227918 998 ntBASIC8.64□□□□□ -1.03
Usf3B2RUQ2 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Usf3B2RUQ2 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
Usf3B2RUQ2 Pdpk1-202ENSMUST00000102927 7161 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
Usf3B2RUQ2 Gm12381-201ENSMUST00000126314 2186 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Usf3B2RUQ2 Gm21817-201ENSMUST00000178584 2583 ntBASIC8.64□□□□□ -1.03
Usf3B2RUQ2 Cdyl-201ENSMUST00000075220 3470 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Usf3B2RUQ2 AC153498.1-201ENSMUST00000219775 2722 ntBASIC8.64□□□□□ -1.03
Usf3B2RUQ2 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Usf3B2RUQ2 Loxl3-202ENSMUST00000101257 3252 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Usf3B2RUQ2 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Usf3B2RUQ2 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Usf3B2RUQ2 Hapln3-203ENSMUST00000206092 3358 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Usf3B2RUQ2 Myo15-202ENSMUST00000081823 7953 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
Usf3B2RUQ2 Gm28268-201ENSMUST00000188966 2528 ntTSL 5 BASIC8.64□□□□□ -1.03
Usf3B2RUQ2 Rint1-203ENSMUST00000115113 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Usf3B2RUQ2 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC8.64□□□□□ -1.03
Usf3B2RUQ2 Platr4-203ENSMUST00000199155 2161 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Usf3B2RUQ2 Extl1-201ENSMUST00000030643 4126 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Usf3B2RUQ2 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Usf3B2RUQ2 AC158777.1-201ENSMUST00000226216 1724 ntBASIC8.64□□□□□ -1.03
Usf3B2RUQ2 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC8.64□□□□□ -1.03
Usf3B2RUQ2 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Usf3B2RUQ2 Gm15540-201ENSMUST00000136052 674 ntTSL 2 BASIC8.64□□□□□ -1.03
Usf3B2RUQ2 Gm13799-201ENSMUST00000138883 838 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Usf3B2RUQ2 2410124H12Rik-201ENSMUST00000160494 706 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Usf3B2RUQ2 Gm9574-201ENSMUST00000173127 845 ntBASIC8.64□□□□□ -1.03
Usf3B2RUQ2 Stard6-206ENSMUST00000174118 1185 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Usf3B2RUQ2 Mir3091-201ENSMUST00000175086 76 ntBASIC8.64□□□□□ -1.03
Usf3B2RUQ2 Arl14-201ENSMUST00000183126 1200 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Usf3B2RUQ2 Gm7833-201ENSMUST00000183288 990 ntBASIC8.64□□□□□ -1.03
Usf3B2RUQ2 Gm27444-201ENSMUST00000184157 137 ntBASIC8.64□□□□□ -1.03
Usf3B2RUQ2 Gm29595-202ENSMUST00000187954 466 ntTSL 3 BASIC8.64□□□□□ -1.03
Usf3B2RUQ2 Gm5190-201ENSMUST00000192434 357 ntBASIC8.64□□□□□ -1.03
Usf3B2RUQ2 Gm8643-201ENSMUST00000195228 625 ntBASIC8.64□□□□□ -1.03
Usf3B2RUQ2 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC8.64□□□□□ -1.03
Usf3B2RUQ2 Gm45670-201ENSMUST00000211382 711 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Usf3B2RUQ2 Gm45745-201ENSMUST00000211447 1180 ntBASIC8.64□□□□□ -1.03
Usf3B2RUQ2 AC117769.1-201ENSMUST00000224716 1120 ntBASIC8.64□□□□□ -1.03
Usf3B2RUQ2 Mptx1-201ENSMUST00000027816 799 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Usf3B2RUQ2 Ttc24-202ENSMUST00000064550 671 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Usf3B2RUQ2 Rps9-201ENSMUST00000006496 751 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Usf3B2RUQ2 Gm25514-201ENSMUST00000083860 135 ntBASIC8.64□□□□□ -1.03
Usf3B2RUQ2 Asgr1-202ENSMUST00000092959 1308 ntAPPRIS P3 TSL 2 BASIC8.64□□□□□ -1.03
Usf3B2RUQ2 Lama3-201ENSMUST00000092070 10548 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Usf3B2RUQ2 Gm42521-201ENSMUST00000199190 2040 ntBASIC8.63□□□□□ -1.03
Usf3B2RUQ2 Gpr19-213ENSMUST00000215088 1484 ntTSL 5 BASIC8.63□□□□□ -1.03
Usf3B2RUQ2 Fbxl20-201ENSMUST00000103143 8601 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Usf3B2RUQ2 Zfp830-201ENSMUST00000056677 1591 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Usf3B2RUQ2 Smok2b-201ENSMUST00000059824 1584 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Usf3B2RUQ2 Gm45397-201ENSMUST00000209816 1600 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Usf3B2RUQ2 Morf4l2-215ENSMUST00000169418 1782 ntAPPRIS P1 TSL 2 BASIC8.63□□□□□ -1.03
Usf3B2RUQ2 AC153524.2-202ENSMUST00000220401 1794 ntBASIC8.63□□□□□ -1.03
Usf3B2RUQ2 Cd22-213ENSMUST00000190617 3230 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Usf3B2RUQ2 AC166359.1-201ENSMUST00000220243 1871 ntBASIC8.63□□□□□ -1.03
Usf3B2RUQ2 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Usf3B2RUQ2 Usp11-201ENSMUST00000033383 3467 ntAPPRIS P1 TSL 2 BASIC8.63□□□□□ -1.03
Usf3B2RUQ2 Gm37516-201ENSMUST00000192593 1954 ntBASIC8.63□□□□□ -1.03
Usf3B2RUQ2 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Usf3B2RUQ2 Stra6-213ENSMUST00000167479 2871 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Usf3B2RUQ2 5730419F03Rik-201ENSMUST00000190504 2092 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Usf3B2RUQ2 Upp1-202ENSMUST00000101525 1157 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Usf3B2RUQ2 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Usf3B2RUQ2 Gm16210-201ENSMUST00000122161 610 ntBASIC8.63□□□□□ -1.03
Usf3B2RUQ2 Gm14148-201ENSMUST00000122433 1008 ntBASIC8.63□□□□□ -1.03
Usf3B2RUQ2 Gm45716-201ENSMUST00000124877 1256 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Usf3B2RUQ2 Rptoros-201ENSMUST00000127450 1174 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Usf3B2RUQ2 Ttc39b-206ENSMUST00000148811 727 ntTSL 3 BASIC8.63□□□□□ -1.03
Usf3B2RUQ2 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC8.63□□□□□ -1.03
Usf3B2RUQ2 Fbxo16-201ENSMUST00000169656 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Usf3B2RUQ2 Gm17782-201ENSMUST00000174345 880 ntBASIC8.63□□□□□ -1.03
Usf3B2RUQ2 Gm21958-201ENSMUST00000178832 648 ntAPPRIS P1 TSL 2 BASIC8.63□□□□□ -1.03
Usf3B2RUQ2 Gm4812-201ENSMUST00000182847 993 ntBASIC8.63□□□□□ -1.03
Usf3B2RUQ2 Ighv5-1-201ENSMUST00000193324 353 ntBASIC8.63□□□□□ -1.03
Usf3B2RUQ2 Adh6-ps1-202ENSMUST00000196293 754 ntBASIC8.63□□□□□ -1.03
Usf3B2RUQ2 Clec2h-202ENSMUST00000204416 386 ntTSL 3 BASIC8.63□□□□□ -1.03
Usf3B2RUQ2 Gm8268-201ENSMUST00000209683 458 ntBASIC8.63□□□□□ -1.03
Usf3B2RUQ2 AC101205.2-201ENSMUST00000226206 715 ntBASIC8.63□□□□□ -1.03
Usf3B2RUQ2 Stat1-203ENSMUST00000186057 3998 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Usf3B2RUQ2 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms