Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Lsm3P62311 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Lsm3P62311 Arap1-203ENSMUST00000098243 3693 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Lsm3P62311 Ccnd1-201ENSMUST00000093962 3740 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Lsm3P62311 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Lsm3P62311 Ank1-213ENSMUST00000141784 6566 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Lsm3P62311 4930412O13Rik-202ENSMUST00000114919 558 ntAPPRIS ALT2 TSL 2 BASIC9.24□□□□□ -0.93
Lsm3P62311 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC9.24□□□□□ -0.93
Lsm3P62311 Gm12645-201ENSMUST00000117297 275 ntBASIC9.24□□□□□ -0.93
Lsm3P62311 Gm13284-201ENSMUST00000121020 547 ntBASIC9.24□□□□□ -0.93
Lsm3P62311 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Lsm3P62311 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC9.24□□□□□ -0.93
Lsm3P62311 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC9.24□□□□□ -0.93
Lsm3P62311 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC9.24□□□□□ -0.93
Lsm3P62311 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Lsm3P62311 Gm3289-201ENSMUST00000200819 756 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Lsm3P62311 Gm43811-201ENSMUST00000202862 695 ntBASIC9.24□□□□□ -0.93
Lsm3P62311 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Lsm3P62311 AC107638.1-201ENSMUST00000213690 1061 ntBASIC9.24□□□□□ -0.93
Lsm3P62311 Gm8162-201ENSMUST00000213951 665 ntBASIC9.24□□□□□ -0.93
Lsm3P62311 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC9.24□□□□□ -0.93
Lsm3P62311 Sfmbt1-204ENSMUST00000227303 2960 ntBASIC9.24□□□□□ -0.93
Lsm3P62311 AC134793.1-202ENSMUST00000227444 803 ntBASIC9.24□□□□□ -0.93
Lsm3P62311 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Lsm3P62311 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Lsm3P62311 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC9.24□□□□□ -0.93
Lsm3P62311 Acbd5-202ENSMUST00000114523 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Lsm3P62311 Acp1-202ENSMUST00000074038 2754 ntAPPRIS ALT1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Lsm3P62311 Dgkeos-204ENSMUST00000178493 1902 ntTSL 5 BASIC9.24□□□□□ -0.93
Lsm3P62311 Tiam1-201ENSMUST00000002588 7290 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Lsm3P62311 Dlg3-203ENSMUST00000113735 3692 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Lsm3P62311 Lpin3-203ENSMUST00000109456 3470 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Lsm3P62311 Rimbp2-205ENSMUST00000199537 6966 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Lsm3P62311 Map4k4-218ENSMUST00000195860 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Lsm3P62311 AC153940.1-201ENSMUST00000220149 5300 ntBASIC9.24□□□□□ -0.93
Lsm3P62311 Gm36426-201ENSMUST00000222903 1795 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Lsm3P62311 Nell2-201ENSMUST00000075275 2675 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Lsm3P62311 Tdrd1-203ENSMUST00000111606 4914 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Lsm3P62311 2810471M01Rik-201ENSMUST00000146554 1597 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Lsm3P62311 Gm37125-201ENSMUST00000195877 1559 ntBASIC9.24□□□□□ -0.93
Lsm3P62311 Gm43532-201ENSMUST00000199389 3816 ntBASIC9.24□□□□□ -0.93
Lsm3P62311 Igf2bp1-201ENSMUST00000013559 8378 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Lsm3P62311 Wdfy3-201ENSMUST00000053177 14274 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Lsm3P62311 Tmprss11d-201ENSMUST00000031175 2716 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Lsm3P62311 Mrpl19-201ENSMUST00000032124 5000 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Lsm3P62311 Ankrd36-201ENSMUST00000109855 1363 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Lsm3P62311 Cd22-210ENSMUST00000189718 3672 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Lsm3P62311 Tomt-201ENSMUST00000106969 2796 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Lsm3P62311 Eapp-204ENSMUST00000161592 4186 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Lsm3P62311 Gm30414-201ENSMUST00000194886 2596 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Lsm3P62311 Gm44597-202ENSMUST00000203287 3516 ntTSL 2 BASIC9.23□□□□□ -0.93
Lsm3P62311 Snx6-204ENSMUST00000218934 1441 ntTSL 5 BASIC9.23□□□□□ -0.93
Lsm3P62311 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Lsm3P62311 Mpp2-202ENSMUST00000100398 3577 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Lsm3P62311 Cacna1c-204ENSMUST00000112793 6669 ntAPPRIS P4 TSL 1 (best) BASIC9.23□□□□□ -0.93
Lsm3P62311 Arhgap24-201ENSMUST00000070000 3632 ntTSL 5 BASIC9.23□□□□□ -0.93
Lsm3P62311 Csf3r-201ENSMUST00000030673 3160 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Lsm3P62311 Srgap3-203ENSMUST00000113169 8300 ntTSL 5 BASIC9.23□□□□□ -0.93
Lsm3P62311 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Lsm3P62311 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Lsm3P62311 Gm19026-201ENSMUST00000194240 4530 ntBASIC9.23□□□□□ -0.93
Lsm3P62311 Slc14a2-201ENSMUST00000025434 2793 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Lsm3P62311 Gm26782-201ENSMUST00000181482 2513 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Lsm3P62311 Prdm1-204ENSMUST00000218369 2517 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Lsm3P62311 Gm7052-201ENSMUST00000167568 1512 ntBASIC9.23□□□□□ -0.93
Lsm3P62311 Pla2g5-202ENSMUST00000102511 690 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Lsm3P62311 Gm15515-201ENSMUST00000117827 822 ntBASIC9.23□□□□□ -0.93
Lsm3P62311 Gm13809-201ENSMUST00000117921 597 ntBASIC9.23□□□□□ -0.93
Lsm3P62311 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC9.23□□□□□ -0.93
Lsm3P62311 Gm12715-201ENSMUST00000121430 1128 ntBASIC9.23□□□□□ -0.93
Lsm3P62311 Pradc1-204ENSMUST00000126805 953 ntTSL 2 BASIC9.23□□□□□ -0.93
Lsm3P62311 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Lsm3P62311 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC9.23□□□□□ -0.93
Lsm3P62311 Zbtb8os-204ENSMUST00000141235 3833 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Lsm3P62311 Gm20392-201ENSMUST00000173047 701 ntBASIC9.23□□□□□ -0.93
Lsm3P62311 Gm8022-201ENSMUST00000191763 904 ntBASIC9.23□□□□□ -0.93
Lsm3P62311 Gm44315-201ENSMUST00000203041 219 ntBASIC9.23□□□□□ -0.93
Lsm3P62311 Gm45909-201ENSMUST00000212413 1031 ntBASIC9.23□□□□□ -0.93
Lsm3P62311 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Lsm3P62311 Gm43305-202ENSMUST00000225083 705 ntBASIC9.23□□□□□ -0.93
Lsm3P62311 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Lsm3P62311 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Lsm3P62311 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Lsm3P62311 Gm9899-201ENSMUST00000065519 555 ntBASIC9.23□□□□□ -0.93
Lsm3P62311 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
Lsm3P62311 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
Lsm3P62311 Ddx5-201ENSMUST00000021062 3559 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Lsm3P62311 Tns1-201ENSMUST00000169786 9966 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Lsm3P62311 Aldh2-201ENSMUST00000031411 3867 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Lsm3P62311 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Lsm3P62311 Anapc1-201ENSMUST00000014499 8942 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Lsm3P62311 Dhrs7b-201ENSMUST00000042281 1553 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Lsm3P62311 Cd14-201ENSMUST00000061829 1572 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Lsm3P62311 Ube2k-207ENSMUST00000202082 4506 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Lsm3P62311 Ccpg1-202ENSMUST00000085350 2969 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Lsm3P62311 Tbc1d24-204ENSMUST00000167791 4383 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Lsm3P62311 Cep63-206ENSMUST00000162655 4180 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Lsm3P62311 Siglech-203ENSMUST00000121492 1655 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Lsm3P62311 Serinc3-201ENSMUST00000017851 3683 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Lsm3P62311 Cacna1d-202ENSMUST00000112250 8688 ntAPPRIS P4 TSL 1 (best) BASIC9.22□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 76 ms