Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Picalm-201ENSMUST00000049537 3528 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trim13Q9CYB0 Tmprss7-201ENSMUST00000114562 2587 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trim13Q9CYB0 Pde4d-209ENSMUST00000122041 2554 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trim13Q9CYB0 Rbbp4-201ENSMUST00000102598 4407 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trim13Q9CYB0 Mndal-202ENSMUST00000186442 1646 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Trim13Q9CYB0 Gpatch4-201ENSMUST00000029707 1630 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trim13Q9CYB0 Gm25076-201ENSMUST00000104098 132 ntBASIC9.58□□□□□ -0.88
Trim13Q9CYB0 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC9.58□□□□□ -0.88
Trim13Q9CYB0 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trim13Q9CYB0 Gm37988-201ENSMUST00000155020 825 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Trim13Q9CYB0 Gm16133-202ENSMUST00000160278 565 ntTSL 3 BASIC9.58□□□□□ -0.88
Trim13Q9CYB0 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trim13Q9CYB0 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Trim13Q9CYB0 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC9.58□□□□□ -0.88
Trim13Q9CYB0 Gm5656-201ENSMUST00000171020 1096 ntBASIC9.58□□□□□ -0.88
Trim13Q9CYB0 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Trim13Q9CYB0 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trim13Q9CYB0 Gm3476-203ENSMUST00000190582 612 ntTSL 5 BASIC9.58□□□□□ -0.88
Trim13Q9CYB0 Gm43163-201ENSMUST00000196571 442 ntBASIC9.58□□□□□ -0.88
Trim13Q9CYB0 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC9.58□□□□□ -0.88
Trim13Q9CYB0 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC9.58□□□□□ -0.88
Trim13Q9CYB0 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC9.58□□□□□ -0.88
Trim13Q9CYB0 Gm17831-201ENSMUST00000205579 900 ntBASIC9.58□□□□□ -0.88
Trim13Q9CYB0 CT485606.1-201ENSMUST00000213187 878 ntBASIC9.58□□□□□ -0.88
Trim13Q9CYB0 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC9.58□□□□□ -0.88
Trim13Q9CYB0 AC134793.1-202ENSMUST00000227444 803 ntBASIC9.58□□□□□ -0.88
Trim13Q9CYB0 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trim13Q9CYB0 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trim13Q9CYB0 Gm10263-201ENSMUST00000085163 300 ntBASIC9.58□□□□□ -0.88
Trim13Q9CYB0 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trim13Q9CYB0 Arpp19-205ENSMUST00000168166 3944 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
Trim13Q9CYB0 Ttc16-206ENSMUST00000161430 2874 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trim13Q9CYB0 Itga7-202ENSMUST00000218290 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trim13Q9CYB0 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trim13Q9CYB0 Myrf-205ENSMUST00000189897 3339 ntAPPRIS P2 TSL 5 BASIC9.58□□□□□ -0.88
Trim13Q9CYB0 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC9.58□□□□□ -0.88
Trim13Q9CYB0 Parp3-201ENSMUST00000067218 2962 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trim13Q9CYB0 Slco5a1-205ENSMUST00000146763 3437 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trim13Q9CYB0 Enox2-202ENSMUST00000114911 2623 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trim13Q9CYB0 Odf2-205ENSMUST00000113757 3082 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Trim13Q9CYB0 Srgap2-204ENSMUST00000186543 3533 ntTSL 5 BASIC9.58□□□□□ -0.88
Trim13Q9CYB0 Nrap-205ENSMUST00000167239 4752 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Trim13Q9CYB0 Cyp4a12b-201ENSMUST00000094887 2395 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trim13Q9CYB0 Ptpn7-201ENSMUST00000049449 3261 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trim13Q9CYB0 Tmem255a-201ENSMUST00000066498 3380 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trim13Q9CYB0 9530026P05Rik-201ENSMUST00000181121 2142 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trim13Q9CYB0 Tcf20-202ENSMUST00000109510 7347 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trim13Q9CYB0 Cd200r2-201ENSMUST00000102805 1750 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trim13Q9CYB0 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC9.58□□□□□ -0.88
Trim13Q9CYB0 Mcm10-202ENSMUST00000102985 4867 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trim13Q9CYB0 Mid1-204ENSMUST00000112104 3860 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Trim13Q9CYB0 5330439K02Rik-201ENSMUST00000180953 2312 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trim13Q9CYB0 Acsl1-201ENSMUST00000034046 3897 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trim13Q9CYB0 Mmrn2-201ENSMUST00000111908 3974 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trim13Q9CYB0 Zmat3-203ENSMUST00000168566 7672 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trim13Q9CYB0 Gm7061-201ENSMUST00000118127 1416 ntBASIC9.57□□□□□ -0.88
Trim13Q9CYB0 Gm8122-201ENSMUST00000165988 1404 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Trim13Q9CYB0 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Trim13Q9CYB0 Zfp74-204ENSMUST00000108212 2060 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trim13Q9CYB0 Ano1-203ENSMUST00000121758 4552 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trim13Q9CYB0 Pi4ka-211ENSMUST00000154364 6630 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trim13Q9CYB0 Fndc7-202ENSMUST00000102620 3477 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trim13Q9CYB0 Plekha7-206ENSMUST00000182487 3476 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Trim13Q9CYB0 Zfr-201ENSMUST00000122941 4850 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trim13Q9CYB0 Ctage5-201ENSMUST00000021384 1628 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trim13Q9CYB0 Csnk2a1-201ENSMUST00000099224 4206 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trim13Q9CYB0 Eno2-202ENSMUST00000112476 2386 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trim13Q9CYB0 Gm42488-201ENSMUST00000197648 3225 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trim13Q9CYB0 Wdfy4-202ENSMUST00000130509 10158 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Trim13Q9CYB0 Gpm6b-201ENSMUST00000060210 2858 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trim13Q9CYB0 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trim13Q9CYB0 Gm5944-201ENSMUST00000118182 1001 ntBASIC9.57□□□□□ -0.88
Trim13Q9CYB0 Gm14314-201ENSMUST00000118225 1015 ntBASIC9.57□□□□□ -0.88
Trim13Q9CYB0 Nod2-203ENSMUST00000118370 4653 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trim13Q9CYB0 Gm14942-201ENSMUST00000119642 336 ntBASIC9.57□□□□□ -0.88
Trim13Q9CYB0 Gm12752-201ENSMUST00000121657 811 ntBASIC9.57□□□□□ -0.88
Trim13Q9CYB0 Slc2a4rg-ps-201ENSMUST00000127559 2976 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trim13Q9CYB0 Gm14133-201ENSMUST00000139471 1274 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trim13Q9CYB0 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC9.57□□□□□ -0.88
Trim13Q9CYB0 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC9.57□□□□□ -0.88
Trim13Q9CYB0 Gm13938-201ENSMUST00000156809 493 ntTSL 5 BASIC9.57□□□□□ -0.88
Trim13Q9CYB0 Gm4982-201ENSMUST00000160440 1098 ntBASIC9.57□□□□□ -0.88
Trim13Q9CYB0 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC9.57□□□□□ -0.88
Trim13Q9CYB0 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC9.57□□□□□ -0.88
Trim13Q9CYB0 Mir6546-201ENSMUST00000184460 62 ntBASIC9.57□□□□□ -0.88
Trim13Q9CYB0 Gm8918-201ENSMUST00000190587 1087 ntBASIC9.57□□□□□ -0.88
Trim13Q9CYB0 Gm3551-201ENSMUST00000190750 664 ntBASIC9.57□□□□□ -0.88
Trim13Q9CYB0 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trim13Q9CYB0 4930517L18Rik-201ENSMUST00000191880 482 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trim13Q9CYB0 Gm43947-201ENSMUST00000203019 959 ntBASIC9.57□□□□□ -0.88
Trim13Q9CYB0 Gm44421-201ENSMUST00000205064 1221 ntBASIC9.57□□□□□ -0.88
Trim13Q9CYB0 AC159205.7-201ENSMUST00000225988 692 ntBASIC9.57□□□□□ -0.88
Trim13Q9CYB0 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trim13Q9CYB0 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trim13Q9CYB0 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Trim13Q9CYB0 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Trim13Q9CYB0 Abcc8-201ENSMUST00000033123 4877 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trim13Q9CYB0 Celf3-215ENSMUST00000200342 3173 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trim13Q9CYB0 Sncaip-203ENSMUST00000163742 3272 ntAPPRIS P3 TSL 5 BASIC9.57□□□□□ -0.88
Trim13Q9CYB0 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms