Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Otud1Q9CUB6 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Otud1Q9CUB6 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Otud1Q9CUB6 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC10.09□□□□□ -0.79
Otud1Q9CUB6 Mak-203ENSMUST00000165087 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Otud1Q9CUB6 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC10.09□□□□□ -0.79
Otud1Q9CUB6 Gm7642-201ENSMUST00000216345 1809 ntBASIC10.09□□□□□ -0.79
Otud1Q9CUB6 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Otud1Q9CUB6 Olfr987-203ENSMUST00000216347 1453 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Otud1Q9CUB6 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Otud1Q9CUB6 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Otud1Q9CUB6 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Otud1Q9CUB6 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Otud1Q9CUB6 Uspl1-202ENSMUST00000100410 3148 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Otud1Q9CUB6 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Otud1Q9CUB6 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Otud1Q9CUB6 Plrg1-204ENSMUST00000150268 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Otud1Q9CUB6 AC154314.2-201ENSMUST00000223677 3502 ntBASIC10.08□□□□□ -0.8
Otud1Q9CUB6 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Otud1Q9CUB6 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Otud1Q9CUB6 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Otud1Q9CUB6 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Otud1Q9CUB6 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Otud1Q9CUB6 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC10.08□□□□□ -0.8
Otud1Q9CUB6 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Otud1Q9CUB6 Zscan21-201ENSMUST00000062350 2252 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Otud1Q9CUB6 Gm26586-201ENSMUST00000181918 1745 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Otud1Q9CUB6 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC10.08□□□□□ -0.8
Otud1Q9CUB6 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC10.08□□□□□ -0.8
Otud1Q9CUB6 Gm12337-201ENSMUST00000119634 400 ntBASIC10.08□□□□□ -0.8
Otud1Q9CUB6 Gm11485-201ENSMUST00000120048 1175 ntBASIC10.08□□□□□ -0.8
Otud1Q9CUB6 Gm15554-201ENSMUST00000120406 913 ntBASIC10.08□□□□□ -0.8
Otud1Q9CUB6 Gm15982-201ENSMUST00000121681 554 ntBASIC10.08□□□□□ -0.8
Otud1Q9CUB6 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Otud1Q9CUB6 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC10.08□□□□□ -0.8
Otud1Q9CUB6 Platr12-201ENSMUST00000141027 462 ntTSL 3 BASIC10.08□□□□□ -0.8
Otud1Q9CUB6 Gm11948-201ENSMUST00000142322 539 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Otud1Q9CUB6 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Otud1Q9CUB6 Gm26653-201ENSMUST00000181537 1214 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Otud1Q9CUB6 Gm20574-201ENSMUST00000182867 917 ntBASIC10.08□□□□□ -0.8
Otud1Q9CUB6 A630095E13Rik-202ENSMUST00000184611 536 ntAPPRIS ALT2 TSL 2 BASIC10.08□□□□□ -0.8
Otud1Q9CUB6 Gm28253-201ENSMUST00000186071 712 ntTSL 5 BASIC10.08□□□□□ -0.8
Otud1Q9CUB6 Gm28835-201ENSMUST00000188415 655 ntTSL 5 BASIC10.08□□□□□ -0.8
Otud1Q9CUB6 Gm29633-207ENSMUST00000190523 737 ntTSL 5 BASIC10.08□□□□□ -0.8
Otud1Q9CUB6 Gm8918-201ENSMUST00000190587 1087 ntBASIC10.08□□□□□ -0.8
Otud1Q9CUB6 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Otud1Q9CUB6 Gm37963-201ENSMUST00000195351 613 ntTSL 3 BASIC10.08□□□□□ -0.8
Otud1Q9CUB6 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Otud1Q9CUB6 Gm38509-201ENSMUST00000197492 1150 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Otud1Q9CUB6 BB187690-201ENSMUST00000198619 1176 ntBASIC10.08□□□□□ -0.8
Otud1Q9CUB6 Gm18010-201ENSMUST00000203553 202 ntBASIC10.08□□□□□ -0.8
Otud1Q9CUB6 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Otud1Q9CUB6 Olfr563-ps1-201ENSMUST00000210909 873 ntBASIC10.08□□□□□ -0.8
Otud1Q9CUB6 Gm7688-201ENSMUST00000212857 337 ntBASIC10.08□□□□□ -0.8
Otud1Q9CUB6 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC10.08□□□□□ -0.8
Otud1Q9CUB6 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC10.08□□□□□ -0.8
Otud1Q9CUB6 AC155300.1-201ENSMUST00000219134 480 ntBASIC10.08□□□□□ -0.8
Otud1Q9CUB6 AC154417.1-201ENSMUST00000223876 476 ntBASIC10.08□□□□□ -0.8
Otud1Q9CUB6 AC154527.3-201ENSMUST00000225519 989 ntBASIC10.08□□□□□ -0.8
Otud1Q9CUB6 Fsip1-201ENSMUST00000028820 1025 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Otud1Q9CUB6 Rnasek-201ENSMUST00000040428 611 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Otud1Q9CUB6 Olfr414-201ENSMUST00000053178 955 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Otud1Q9CUB6 Vmn1r8-201ENSMUST00000078186 1213 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Otud1Q9CUB6 Nt5dc1-202ENSMUST00000099973 761 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Otud1Q9CUB6 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Otud1Q9CUB6 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Otud1Q9CUB6 Srd5a3-203ENSMUST00000113507 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Otud1Q9CUB6 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Otud1Q9CUB6 Gm38187-201ENSMUST00000195609 4709 ntBASIC10.08□□□□□ -0.8
Otud1Q9CUB6 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Otud1Q9CUB6 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Otud1Q9CUB6 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Otud1Q9CUB6 Adgre5-202ENSMUST00000075843 3000 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Otud1Q9CUB6 Angptl2-201ENSMUST00000004208 3339 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Otud1Q9CUB6 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Otud1Q9CUB6 Pdcl-202ENSMUST00000112940 3056 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Otud1Q9CUB6 Pcdhb9-201ENSMUST00000057228 3055 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Otud1Q9CUB6 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Otud1Q9CUB6 Acsl1-201ENSMUST00000034046 3897 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Otud1Q9CUB6 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Otud1Q9CUB6 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC10.07□□□□□ -0.8
Otud1Q9CUB6 Tmigd1-202ENSMUST00000102495 1427 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Otud1Q9CUB6 Gm8122-201ENSMUST00000165988 1404 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Otud1Q9CUB6 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC10.07□□□□□ -0.8
Otud1Q9CUB6 Tial1-202ENSMUST00000106226 4451 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Otud1Q9CUB6 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Otud1Q9CUB6 AC154220.1-201ENSMUST00000225033 1705 ntBASIC10.07□□□□□ -0.8
Otud1Q9CUB6 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Otud1Q9CUB6 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Otud1Q9CUB6 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC10.07□□□□□ -0.8
Otud1Q9CUB6 Ern2-201ENSMUST00000033153 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Otud1Q9CUB6 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Otud1Q9CUB6 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Otud1Q9CUB6 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC10.07□□□□□ -0.8
Otud1Q9CUB6 Mei4-203ENSMUST00000189832 2578 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Otud1Q9CUB6 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Otud1Q9CUB6 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Otud1Q9CUB6 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Otud1Q9CUB6 Gm5159-201ENSMUST00000212733 1652 ntBASIC10.07□□□□□ -0.8
Otud1Q9CUB6 Gm39117-201ENSMUST00000207692 1569 ntTSL 5 BASIC10.07□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 86.3 ms