Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Clrn1Q8K445 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Clrn1Q8K445 Paip2-202ENSMUST00000115734 815 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Clrn1Q8K445 Gm15003-201ENSMUST00000118884 446 ntBASIC9.74□□□□□ -0.85
Clrn1Q8K445 Gm12783-201ENSMUST00000121425 397 ntBASIC9.74□□□□□ -0.85
Clrn1Q8K445 Gm11675-201ENSMUST00000121873 832 ntBASIC9.74□□□□□ -0.85
Clrn1Q8K445 Gm14320-201ENSMUST00000137275 1023 ntTSL 3 BASIC9.74□□□□□ -0.85
Clrn1Q8K445 Gm12927-201ENSMUST00000150252 373 ntTSL 2 BASIC9.74□□□□□ -0.85
Clrn1Q8K445 1700001J04Rik-202ENSMUST00000154037 743 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Clrn1Q8K445 Mocs2-201ENSMUST00000015680 1152 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Clrn1Q8K445 Ubl5-203ENSMUST00000160124 501 ntAPPRIS P1 TSL 2 BASIC9.74□□□□□ -0.85
Clrn1Q8K445 Gm17214-201ENSMUST00000164501 541 ntBASIC9.74□□□□□ -0.85
Clrn1Q8K445 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC9.74□□□□□ -0.85
Clrn1Q8K445 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Clrn1Q8K445 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Clrn1Q8K445 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Clrn1Q8K445 Tcstv1-201ENSMUST00000178510 1280 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Clrn1Q8K445 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Clrn1Q8K445 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Clrn1Q8K445 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Clrn1Q8K445 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Clrn1Q8K445 Arl14-201ENSMUST00000183126 1200 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Clrn1Q8K445 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC9.74□□□□□ -0.85
Clrn1Q8K445 Gm37232-201ENSMUST00000194887 367 ntBASIC9.74□□□□□ -0.85
Clrn1Q8K445 Gm42617-201ENSMUST00000197640 1229 ntBASIC9.74□□□□□ -0.85
Clrn1Q8K445 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC9.74□□□□□ -0.85
Clrn1Q8K445 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC9.74□□□□□ -0.85
Clrn1Q8K445 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC9.74□□□□□ -0.85
Clrn1Q8K445 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Clrn1Q8K445 Gm40383-201ENSMUST00000222601 610 ntTSL 5 BASIC9.74□□□□□ -0.85
Clrn1Q8K445 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Clrn1Q8K445 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC9.74□□□□□ -0.85
Clrn1Q8K445 Rnasek-201ENSMUST00000040428 611 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Clrn1Q8K445 Olfm3-202ENSMUST00000081752 4647 ntAPPRIS ALT1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Clrn1Q8K445 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Clrn1Q8K445 Col6a5-203ENSMUST00000190193 9289 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Clrn1Q8K445 Tmem106a-201ENSMUST00000039581 2304 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Clrn1Q8K445 Tmem255a-201ENSMUST00000066498 3380 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Clrn1Q8K445 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Clrn1Q8K445 Spata17-201ENSMUST00000027908 1303 ntAPPRIS P3 TSL 2 BASIC9.74□□□□□ -0.85
Clrn1Q8K445 Ankub1-202ENSMUST00000197088 1854 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Clrn1Q8K445 Plec-215ENSMUST00000169108 14853 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Clrn1Q8K445 Rasgef1a-203ENSMUST00000203804 2183 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Clrn1Q8K445 Rbm10-204ENSMUST00000115374 3564 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Clrn1Q8K445 Pcdhb20-201ENSMUST00000052179 3559 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Clrn1Q8K445 Gm28042-202ENSMUST00000129685 4472 ntAPPRIS P5 TSL 5 BASIC9.74□□□□□ -0.85
Clrn1Q8K445 Napepld-202ENSMUST00000115217 3954 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Clrn1Q8K445 Slco5a1-202ENSMUST00000115403 8509 ntAPPRIS P2 TSL 5 BASIC9.73□□□□□ -0.85
Clrn1Q8K445 Creb3l4-202ENSMUST00000107369 1404 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Clrn1Q8K445 Oprm1-204ENSMUST00000063036 1427 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Clrn1Q8K445 D630003M21Rik-203ENSMUST00000169335 3457 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Clrn1Q8K445 AC154575.1-201ENSMUST00000227166 1474 ntBASIC9.73□□□□□ -0.85
Clrn1Q8K445 Prdx3-201ENSMUST00000025961 1478 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Clrn1Q8K445 Vrk1-204ENSMUST00000220629 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Clrn1Q8K445 4732487G21Rik-201ENSMUST00000181495 2664 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Clrn1Q8K445 Nfkbiz-204ENSMUST00000114458 3627 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Clrn1Q8K445 Daam2-201ENSMUST00000057610 3646 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Clrn1Q8K445 Gm364-201ENSMUST00000114725 2156 ntAPPRIS P1 TSL 2 BASIC9.73□□□□□ -0.85
Clrn1Q8K445 Thsd7b-202ENSMUST00000073527 6213 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Clrn1Q8K445 Nmrk2-201ENSMUST00000005069 1854 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Clrn1Q8K445 Pgbd5-206ENSMUST00000172566 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Clrn1Q8K445 Ppm1b-203ENSMUST00000112305 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Clrn1Q8K445 Adra1a-203ENSMUST00000159365 4118 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Clrn1Q8K445 Spaca9-201ENSMUST00000102877 671 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Clrn1Q8K445 Masp2-202ENSMUST00000105701 738 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Clrn1Q8K445 Zbp1-202ENSMUST00000109116 770 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Clrn1Q8K445 Rab29-202ENSMUST00000112386 1202 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Clrn1Q8K445 Gm15032-201ENSMUST00000118547 411 ntBASIC9.73□□□□□ -0.85
Clrn1Q8K445 Gm6500-201ENSMUST00000119412 451 ntBASIC9.73□□□□□ -0.85
Clrn1Q8K445 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC9.73□□□□□ -0.85
Clrn1Q8K445 Ppt1-204ENSMUST00000121870 986 ntTSL 2 BASIC9.73□□□□□ -0.85
Clrn1Q8K445 Gm13981-201ENSMUST00000122360 447 ntBASIC9.73□□□□□ -0.85
Clrn1Q8K445 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC9.73□□□□□ -0.85
Clrn1Q8K445 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC9.73□□□□□ -0.85
Clrn1Q8K445 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC9.73□□□□□ -0.85
Clrn1Q8K445 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC9.73□□□□□ -0.85
Clrn1Q8K445 Gm4858-201ENSMUST00000179064 735 ntTSL 5 BASIC9.73□□□□□ -0.85
Clrn1Q8K445 Gm26550-201ENSMUST00000180699 1184 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Clrn1Q8K445 Gm26989-201ENSMUST00000182608 749 ntBASIC9.73□□□□□ -0.85
Clrn1Q8K445 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC9.73□□□□□ -0.85
Clrn1Q8K445 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC9.73□□□□□ -0.85
Clrn1Q8K445 Gm18706-201ENSMUST00000210053 1066 ntBASIC9.73□□□□□ -0.85
Clrn1Q8K445 Gm19121-201ENSMUST00000215720 1022 ntBASIC9.73□□□□□ -0.85
Clrn1Q8K445 CT025689.1-201ENSMUST00000225214 283 ntBASIC9.73□□□□□ -0.85
Clrn1Q8K445 AC149294.3-201ENSMUST00000226888 732 ntBASIC9.73□□□□□ -0.85
Clrn1Q8K445 Calm4-201ENSMUST00000042219 917 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Clrn1Q8K445 Mrps14-202ENSMUST00000097193 787 ntTSL 2 BASIC9.73□□□□□ -0.85
Clrn1Q8K445 Hist4h4-201ENSMUST00000179285 2863 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Clrn1Q8K445 Mitf-201ENSMUST00000043628 1921 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Clrn1Q8K445 AC154640.1-203ENSMUST00000228316 1618 ntBASIC9.73□□□□□ -0.85
Clrn1Q8K445 Rpap2-201ENSMUST00000065422 2268 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Clrn1Q8K445 Adam1b-201ENSMUST00000079368 3338 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Clrn1Q8K445 Trim17-201ENSMUST00000047697 3664 ntTSL 2 BASIC9.73□□□□□ -0.85
Clrn1Q8K445 Lpxn-201ENSMUST00000025601 1675 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Clrn1Q8K445 AC022682.1-201ENSMUST00000224624 2023 ntBASIC9.73□□□□□ -0.85
Clrn1Q8K445 4632418H02Rik-201ENSMUST00000217287 2721 ntBASIC9.73□□□□□ -0.85
Clrn1Q8K445 Fan1-201ENSMUST00000163289 3460 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Clrn1Q8K445 Zbtb43-201ENSMUST00000028125 4998 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Clrn1Q8K445 Sptbn1-202ENSMUST00000011877 8238 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Clrn1Q8K445 Pigb-202ENSMUST00000098566 2193 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms