Protein–RNA interactions for Protein: Q02789

Cacna1s, Voltage-dependent L-type calcium channel subunit alpha-1S, mousemouse

Predictions only

Length 1,880 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1sQ02789 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cacna1sQ02789 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cacna1sQ02789 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cacna1sQ02789 Gm12817-201ENSMUST00000119622 610 ntBASIC12.8□□□□□ -0.36
Cacna1sQ02789 Gm12726-201ENSMUST00000121621 601 ntBASIC12.8□□□□□ -0.36
Cacna1sQ02789 Gm12702-201ENSMUST00000123258 612 ntTSL 3 BASIC12.8□□□□□ -0.36
Cacna1sQ02789 Gm12146-201ENSMUST00000127604 518 ntTSL 3 BASIC12.8□□□□□ -0.36
Cacna1sQ02789 Gm14487-201ENSMUST00000145413 1259 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cacna1sQ02789 Ggta1-209ENSMUST00000164889 1185 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Cacna1sQ02789 Gm20821-201ENSMUST00000179829 1153 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Cacna1sQ02789 Gm20854-202ENSMUST00000181549 1156 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Cacna1sQ02789 Gm20844-201ENSMUST00000186101 654 ntBASIC12.8□□□□□ -0.36
Cacna1sQ02789 Gm20921-201ENSMUST00000188265 652 ntBASIC12.8□□□□□ -0.36
Cacna1sQ02789 Cdk2ap1-205ENSMUST00000196910 483 ntAPPRIS ALT1 TSL 2 BASIC12.8□□□□□ -0.36
Cacna1sQ02789 Gm43957-201ENSMUST00000203606 362 ntBASIC12.8□□□□□ -0.36
Cacna1sQ02789 Olfr696-ps1-201ENSMUST00000207160 948 ntBASIC12.8□□□□□ -0.36
Cacna1sQ02789 Gm44576-201ENSMUST00000208876 411 ntBASIC12.8□□□□□ -0.36
Cacna1sQ02789 Gm31941-201ENSMUST00000209689 350 ntBASIC12.8□□□□□ -0.36
Cacna1sQ02789 CT033781.3-201ENSMUST00000221886 504 ntTSL 2 BASIC12.8□□□□□ -0.36
Cacna1sQ02789 AC159106.2-201ENSMUST00000223732 486 ntBASIC12.8□□□□□ -0.36
Cacna1sQ02789 AC133156.2-201ENSMUST00000226865 784 ntBASIC12.8□□□□□ -0.36
Cacna1sQ02789 Gm7125-201ENSMUST00000093430 273 ntBASIC12.8□□□□□ -0.36
Cacna1sQ02789 Tigit-201ENSMUST00000096065 963 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cacna1sQ02789 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cacna1sQ02789 Sept2-201ENSMUST00000027495 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cacna1sQ02789 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC12.8□□□□□ -0.36
Cacna1sQ02789 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Cacna1sQ02789 Pramef12-201ENSMUST00000030326 2460 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cacna1sQ02789 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cacna1sQ02789 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cacna1sQ02789 Gm37886-201ENSMUST00000195349 1513 ntBASIC12.8□□□□□ -0.36
Cacna1sQ02789 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Cacna1sQ02789 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Cacna1sQ02789 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cacna1sQ02789 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Cacna1sQ02789 Gm29358-202ENSMUST00000187941 3227 ntBASIC12.8□□□□□ -0.36
Cacna1sQ02789 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cacna1sQ02789 Gm38025-201ENSMUST00000193926 2308 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cacna1sQ02789 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cacna1sQ02789 Glod4-209ENSMUST00000170710 1445 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cacna1sQ02789 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cacna1sQ02789 Gas2-209ENSMUST00000208711 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cacna1sQ02789 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cacna1sQ02789 Gm4798-201ENSMUST00000218024 1699 ntBASIC12.8□□□□□ -0.36
Cacna1sQ02789 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Cacna1sQ02789 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cacna1sQ02789 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cacna1sQ02789 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cacna1sQ02789 Drc3-201ENSMUST00000070805 2061 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cacna1sQ02789 Gdpd1-201ENSMUST00000020804 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cacna1sQ02789 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cacna1sQ02789 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Cacna1sQ02789 Myl7-201ENSMUST00000102921 590 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cacna1sQ02789 Ighv1-72-201ENSMUST00000103541 396 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Cacna1sQ02789 Wfdc6a-202ENSMUST00000109342 796 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Cacna1sQ02789 Gm14174-201ENSMUST00000153158 161 ntTSL 5 BASIC12.8□□□□□ -0.36
Cacna1sQ02789 Snhg17-208ENSMUST00000154242 346 ntTSL 3 BASIC12.8□□□□□ -0.36
Cacna1sQ02789 Gm27941-201ENSMUST00000183418 142 ntBASIC12.8□□□□□ -0.36
Cacna1sQ02789 Gm30173-201ENSMUST00000195035 1128 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cacna1sQ02789 Gm18942-201ENSMUST00000213578 1121 ntBASIC12.8□□□□□ -0.36
Cacna1sQ02789 Gm18745-201ENSMUST00000216018 548 ntBASIC12.8□□□□□ -0.36
Cacna1sQ02789 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
Cacna1sQ02789 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Cacna1sQ02789 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cacna1sQ02789 Gm43737-201ENSMUST00000199915 2740 ntBASIC12.8□□□□□ -0.36
Cacna1sQ02789 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cacna1sQ02789 Sun1-201ENSMUST00000058716 4134 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cacna1sQ02789 Prpf39-201ENSMUST00000120580 4069 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Cacna1sQ02789 Gm17031-201ENSMUST00000016698 1669 ntBASIC12.8□□□□□ -0.36
Cacna1sQ02789 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cacna1sQ02789 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cacna1sQ02789 Fcrl1-202ENSMUST00000163661 1649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cacna1sQ02789 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cacna1sQ02789 Cd200r2-201ENSMUST00000102805 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cacna1sQ02789 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cacna1sQ02789 Gm43785-201ENSMUST00000201036 1345 ntBASIC12.79□□□□□ -0.36
Cacna1sQ02789 Xlr4b-202ENSMUST00000069103 1304 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Cacna1sQ02789 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cacna1sQ02789 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Cacna1sQ02789 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cacna1sQ02789 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cacna1sQ02789 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cacna1sQ02789 Tpt1-ps5-201ENSMUST00000112150 516 ntBASIC12.79□□□□□ -0.36
Cacna1sQ02789 Gm11199-201ENSMUST00000118691 507 ntBASIC12.79□□□□□ -0.36
Cacna1sQ02789 Gm9051-201ENSMUST00000119335 1035 ntBASIC12.79□□□□□ -0.36
Cacna1sQ02789 E330017L17Rik-202ENSMUST00000139190 861 ntTSL 5 BASIC12.79□□□□□ -0.36
Cacna1sQ02789 Kank3-204ENSMUST00000173789 783 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cacna1sQ02789 Zfp87-203ENSMUST00000181573 382 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cacna1sQ02789 Gm28645-201ENSMUST00000185859 564 ntBASIC12.79□□□□□ -0.36
Cacna1sQ02789 Gm46142-201ENSMUST00000213332 481 ntBASIC12.79□□□□□ -0.36
Cacna1sQ02789 AC154687.1-201ENSMUST00000224875 677 ntBASIC12.79□□□□□ -0.36
Cacna1sQ02789 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Cacna1sQ02789 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cacna1sQ02789 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cacna1sQ02789 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cacna1sQ02789 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cacna1sQ02789 Acsl6-203ENSMUST00000072178 2432 ntAPPRIS P5 TSL 5 BASIC12.79□□□□□ -0.36
Cacna1sQ02789 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.79□□□□□ -0.36
Cacna1sQ02789 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cacna1sQ02789 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms