Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 D130017N08Rik-201ENSMUST00000180460 510 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Ybx1P62960 Gm26978-201ENSMUST00000182843 304 ntTSL 3 BASIC10.62□□□□□ -0.71
Ybx1P62960 Gm36980-201ENSMUST00000195643 622 ntBASIC10.62□□□□□ -0.71
Ybx1P62960 Gm42780-201ENSMUST00000197083 734 ntBASIC10.62□□□□□ -0.71
Ybx1P62960 Gm43777-201ENSMUST00000197269 376 ntTSL 3 BASIC10.62□□□□□ -0.71
Ybx1P62960 Gm6370-202ENSMUST00000198912 1017 ntAPPRIS ALT2 TSL 3 BASIC10.62□□□□□ -0.71
Ybx1P62960 Tceanc2-203ENSMUST00000058585 766 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Ybx1P62960 Gm9869-201ENSMUST00000063858 375 ntTSL 5 BASIC10.62□□□□□ -0.71
Ybx1P62960 Proca1-202ENSMUST00000078099 1254 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ybx1P62960 Gm25483-201ENSMUST00000083224 227 ntBASIC10.62□□□□□ -0.71
Ybx1P62960 CT868720.1-201ENSMUST00000223069 2544 ntBASIC10.62□□□□□ -0.71
Ybx1P62960 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Ybx1P62960 C030014I23Rik-204ENSMUST00000217463 1370 ntTSL 5 BASIC10.62□□□□□ -0.71
Ybx1P62960 Nln-205ENSMUST00000224945 2486 ntBASIC10.62□□□□□ -0.71
Ybx1P62960 Dffa-201ENSMUST00000030816 2457 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ybx1P62960 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Ybx1P62960 Mut-201ENSMUST00000169611 3675 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ybx1P62960 Gm45397-201ENSMUST00000209816 1600 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Ybx1P62960 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Ybx1P62960 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ybx1P62960 Gm42974-201ENSMUST00000199556 2654 ntBASIC10.61□□□□□ -0.71
Ybx1P62960 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ybx1P62960 Rab2b-201ENSMUST00000022765 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ybx1P62960 Il10-201ENSMUST00000016673 1310 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ybx1P62960 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ybx1P62960 Cfap74-204ENSMUST00000123952 2365 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ybx1P62960 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Ybx1P62960 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC10.61□□□□□ -0.71
Ybx1P62960 Ttc39a-202ENSMUST00000106618 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ybx1P62960 Foxr1-201ENSMUST00000098837 1968 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ybx1P62960 Hmgb2-201ENSMUST00000067925 2628 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ybx1P62960 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ybx1P62960 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ybx1P62960 Myc-206ENSMUST00000167731 1821 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Ybx1P62960 Smarca5-ps-201ENSMUST00000121843 3123 ntBASIC10.61□□□□□ -0.71
Ybx1P62960 Skp2-201ENSMUST00000096482 3118 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ybx1P62960 Gm16499-201ENSMUST00000204648 2065 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Ybx1P62960 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ybx1P62960 Olfr272-202ENSMUST00000107667 1936 ntAPPRIS P1 TSL 3 BASIC10.61□□□□□ -0.71
Ybx1P62960 Alas1-202ENSMUST00000112524 3089 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ybx1P62960 Sorbs3-203ENSMUST00000227653 3061 ntAPPRIS ALT2 BASIC10.61□□□□□ -0.71
Ybx1P62960 Tomm5-203ENSMUST00000107809 738 ntTSL 3 BASIC10.61□□□□□ -0.71
Ybx1P62960 Wfdc2-203ENSMUST00000109345 558 ntAPPRIS ALT2 TSL 3 BASIC10.61□□□□□ -0.71
Ybx1P62960 Ppp1r2-ps4-201ENSMUST00000112182 633 ntBASIC10.61□□□□□ -0.71
Ybx1P62960 Rhox4a-201ENSMUST00000115194 925 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ybx1P62960 Gm13303-201ENSMUST00000117125 1284 ntBASIC10.61□□□□□ -0.71
Ybx1P62960 2410003L11Rik-202ENSMUST00000145262 642 ntTSL 3 BASIC10.61□□□□□ -0.71
Ybx1P62960 Gm13778-202ENSMUST00000146633 537 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Ybx1P62960 Gm3687-201ENSMUST00000161710 460 ntBASIC10.61□□□□□ -0.71
Ybx1P62960 Gm4868-201ENSMUST00000164138 789 ntBASIC10.61□□□□□ -0.71
Ybx1P62960 Gm9513-201ENSMUST00000165591 306 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ybx1P62960 Actb-207ENSMUST00000167721 1242 ntTSL 5 BASIC10.61□□□□□ -0.71
Ybx1P62960 Gm19668-201ENSMUST00000178581 747 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Ybx1P62960 Pou1f1-205ENSMUST00000184525 1020 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Ybx1P62960 Gm27200-201ENSMUST00000184626 657 ntTSL 3 BASIC10.61□□□□□ -0.71
Ybx1P62960 Gm44460-201ENSMUST00000196179 129 ntBASIC10.61□□□□□ -0.71
Ybx1P62960 Ckb-ps2-201ENSMUST00000198886 1001 ntBASIC10.61□□□□□ -0.71
Ybx1P62960 AC166902.2-202ENSMUST00000213191 1038 ntTSL 5 BASIC10.61□□□□□ -0.71
Ybx1P62960 Gm18391-201ENSMUST00000217189 658 ntBASIC10.61□□□□□ -0.71
Ybx1P62960 Gm18596-201ENSMUST00000218133 843 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Ybx1P62960 Gm46329-201ENSMUST00000218373 609 ntTSL 5 BASIC10.61□□□□□ -0.71
Ybx1P62960 Gm2696-201ENSMUST00000220062 723 ntAPPRIS P5 BASIC10.61□□□□□ -0.71
Ybx1P62960 Tcl1b1-202ENSMUST00000222342 664 ntAPPRIS ALT2 TSL 2 BASIC10.61□□□□□ -0.71
Ybx1P62960 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ybx1P62960 4933425M03Rik-201ENSMUST00000195991 1544 ntBASIC10.61□□□□□ -0.71
Ybx1P62960 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ybx1P62960 Car13-201ENSMUST00000029071 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ybx1P62960 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC10.61□□□□□ -0.71
Ybx1P62960 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ybx1P62960 Ncmap-203ENSMUST00000105858 1616 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ybx1P62960 Arhgap4-202ENSMUST00000114404 2895 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Ybx1P62960 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Ybx1P62960 Gm43339-201ENSMUST00000200032 1606 ntBASIC10.61□□□□□ -0.71
Ybx1P62960 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ybx1P62960 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ybx1P62960 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Ybx1P62960 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC10.61□□□□□ -0.71
Ybx1P62960 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ybx1P62960 Zeb2os-201ENSMUST00000127150 1305 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Ybx1P62960 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
Ybx1P62960 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Ybx1P62960 Gm37036-201ENSMUST00000192836 2506 ntBASIC10.6□□□□□ -0.71
Ybx1P62960 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ybx1P62960 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ybx1P62960 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ybx1P62960 Gm10344-201ENSMUST00000193498 1419 ntBASIC10.6□□□□□ -0.71
Ybx1P62960 Bpifb1-201ENSMUST00000028987 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ybx1P62960 Gm3404-201ENSMUST00000110596 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ybx1P62960 Rpl7a-ps11-201ENSMUST00000118791 801 ntBASIC10.6□□□□□ -0.71
Ybx1P62960 Gm14370-201ENSMUST00000122460 868 ntBASIC10.6□□□□□ -0.71
Ybx1P62960 Gm15273-201ENSMUST00000142302 868 ntBASIC10.6□□□□□ -0.71
Ybx1P62960 Gm12737-201ENSMUST00000142835 725 ntTSL 5 BASIC10.6□□□□□ -0.71
Ybx1P62960 Gm7023-201ENSMUST00000147295 868 ntBASIC10.6□□□□□ -0.71
Ybx1P62960 Gm16283-201ENSMUST00000149935 522 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Ybx1P62960 1700028K03Rik-202ENSMUST00000159902 742 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Ybx1P62960 Osgep-207ENSMUST00000162177 1219 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Ybx1P62960 Gm14357-201ENSMUST00000178352 868 ntBASIC10.6□□□□□ -0.71
Ybx1P62960 Gm14361-201ENSMUST00000178547 868 ntBASIC10.6□□□□□ -0.71
Ybx1P62960 Gm14348-201ENSMUST00000179183 868 ntBASIC10.6□□□□□ -0.71
Ybx1P62960 6720482G16Rik-201ENSMUST00000199552 1192 ntBASIC10.6□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms