Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Nt5c1b-203ENSMUST00000143739 1570 ntTSL 2 BASIC10.19□□□□□ -0.78
Cd9P40240 Ddx21-201ENSMUST00000045866 4722 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cd9P40240 1700022A22Rik-202ENSMUST00000187130 1458 ntTSL 5 BASIC10.19□□□□□ -0.78
Cd9P40240 Ispd-206ENSMUST00000223068 2808 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Cd9P40240 Use1-203ENSMUST00000110054 973 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cd9P40240 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Cd9P40240 Msrb1-202ENSMUST00000115262 886 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cd9P40240 Ywhaq-ps3-201ENSMUST00000120944 738 ntBASIC10.19□□□□□ -0.78
Cd9P40240 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cd9P40240 Pla2g1b-204ENSMUST00000145785 419 ntTSL 5 BASIC10.19□□□□□ -0.78
Cd9P40240 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Cd9P40240 Gm17070-201ENSMUST00000170463 784 ntBASIC10.19□□□□□ -0.78
Cd9P40240 Gm22877-201ENSMUST00000175451 105 ntBASIC10.19□□□□□ -0.78
Cd9P40240 Gal3st2b-201ENSMUST00000177958 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cd9P40240 Gm3534-201ENSMUST00000182522 1001 ntBASIC10.19□□□□□ -0.78
Cd9P40240 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Cd9P40240 Plet1os-202ENSMUST00000190941 1119 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Cd9P40240 Gm38349-201ENSMUST00000195732 462 ntBASIC10.19□□□□□ -0.78
Cd9P40240 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cd9P40240 Gm44388-201ENSMUST00000204350 258 ntBASIC10.19□□□□□ -0.78
Cd9P40240 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Cd9P40240 Gm7192-201ENSMUST00000210793 1137 ntBASIC10.19□□□□□ -0.78
Cd9P40240 Gm18001-201ENSMUST00000212023 688 ntBASIC10.19□□□□□ -0.78
Cd9P40240 Gm3318-201ENSMUST00000217604 1183 ntBASIC10.19□□□□□ -0.78
Cd9P40240 Gm18119-201ENSMUST00000219972 616 ntBASIC10.19□□□□□ -0.78
Cd9P40240 AC164556.1-201ENSMUST00000221318 751 ntBASIC10.19□□□□□ -0.78
Cd9P40240 Gm36862-204ENSMUST00000223365 642 ntTSL 3 BASIC10.19□□□□□ -0.78
Cd9P40240 AC154361.2-201ENSMUST00000224747 943 ntBASIC10.19□□□□□ -0.78
Cd9P40240 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cd9P40240 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cd9P40240 Ndufc1-201ENSMUST00000038108 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cd9P40240 Gm6564-201ENSMUST00000075377 619 ntBASIC10.19□□□□□ -0.78
Cd9P40240 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Cd9P40240 Olfr1328-201ENSMUST00000081960 944 ntAPPRIS P2 BASIC10.19□□□□□ -0.78
Cd9P40240 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cd9P40240 Slc5a9-201ENSMUST00000102719 2460 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cd9P40240 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cd9P40240 Nrap-205ENSMUST00000167239 4752 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Cd9P40240 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cd9P40240 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Cd9P40240 Rrp8-202ENSMUST00000098148 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cd9P40240 Acsm2-201ENSMUST00000084647 2051 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Cd9P40240 Grb10-202ENSMUST00000109653 2048 ntTSL 5 BASIC10.19□□□□□ -0.78
Cd9P40240 Mapkap1-203ENSMUST00000113126 3018 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cd9P40240 Upb1-201ENSMUST00000039925 3042 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cd9P40240 Gm20735-201ENSMUST00000212077 1979 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Cd9P40240 Entpd8-202ENSMUST00000114376 1942 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Cd9P40240 Gm15943-201ENSMUST00000147638 3821 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Cd9P40240 Gk2-201ENSMUST00000059657 1880 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Cd9P40240 Mcm5-205ENSMUST00000212811 2653 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cd9P40240 Pdlim5-204ENSMUST00000168967 1755 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Cd9P40240 5730596B20Rik-201ENSMUST00000070587 3354 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Cd9P40240 Slc10a1-201ENSMUST00000095572 1674 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cd9P40240 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cd9P40240 Exosc1-201ENSMUST00000075280 1622 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cd9P40240 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cd9P40240 Vil1-201ENSMUST00000027366 3124 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cd9P40240 Zc3h18-202ENSMUST00000093073 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cd9P40240 Lrpap1-201ENSMUST00000030986 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cd9P40240 9530026P05Rik-201ENSMUST00000181121 2142 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cd9P40240 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cd9P40240 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Cd9P40240 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC10.18□□□□□ -0.78
Cd9P40240 Gm26818-201ENSMUST00000181367 1360 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cd9P40240 Gm26822-201ENSMUST00000181732 3374 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cd9P40240 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cd9P40240 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cd9P40240 Ctsll3-201ENSMUST00000043754 1337 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cd9P40240 Nupl1-202ENSMUST00000041905 3913 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cd9P40240 Sec31b-201ENSMUST00000063632 3939 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Cd9P40240 2310002L09Rik-202ENSMUST00000095023 1929 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cd9P40240 Gm24791-201ENSMUST00000104284 131 ntBASIC10.18□□□□□ -0.78
Cd9P40240 Gm24471-201ENSMUST00000104485 131 ntBASIC10.18□□□□□ -0.78
Cd9P40240 Gm12028-201ENSMUST00000118065 436 ntBASIC10.18□□□□□ -0.78
Cd9P40240 Gm13792-201ENSMUST00000121350 423 ntBASIC10.18□□□□□ -0.78
Cd9P40240 Ppt1-204ENSMUST00000121870 986 ntTSL 2 BASIC10.18□□□□□ -0.78
Cd9P40240 Gm15287-201ENSMUST00000132564 751 ntTSL 2 BASIC10.18□□□□□ -0.78
Cd9P40240 Gm9507-202ENSMUST00000180157 654 ntBASIC10.18□□□□□ -0.78
Cd9P40240 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cd9P40240 Gm18894-201ENSMUST00000198794 694 ntBASIC10.18□□□□□ -0.78
Cd9P40240 AC162932.1-201ENSMUST00000219209 872 ntBASIC10.18□□□□□ -0.78
Cd9P40240 Gm7959-201ENSMUST00000221823 1078 ntBASIC10.18□□□□□ -0.78
Cd9P40240 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Cd9P40240 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cd9P40240 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cd9P40240 AC130671.3-201ENSMUST00000227393 1897 ntBASIC10.18□□□□□ -0.78
Cd9P40240 Slc18a1-201ENSMUST00000037478 3115 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cd9P40240 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cd9P40240 Gm38910-201ENSMUST00000204630 2448 ntBASIC10.18□□□□□ -0.78
Cd9P40240 Smad2-201ENSMUST00000025453 2410 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cd9P40240 Pigq-218ENSMUST00000208043 2987 ntAPPRIS P3 TSL 5 BASIC10.18□□□□□ -0.78
Cd9P40240 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cd9P40240 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Cd9P40240 Slc19a1-208ENSMUST00000136925 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cd9P40240 Ptgs2os2-201ENSMUST00000181308 1745 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cd9P40240 Gpm6b-201ENSMUST00000060210 2858 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cd9P40240 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
Cd9P40240 Pus7l-201ENSMUST00000049151 2840 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cd9P40240 Ccdc62-202ENSMUST00000165148 3920 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Cd9P40240 Gabrr3-201ENSMUST00000114341 1656 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms