Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm14465-201ENSMUST00000120603 567 ntBASIC8.5□□□□□ -1.05
Hoxd3P09027 Gm14200-201ENSMUST00000122256 192 ntBASIC8.5□□□□□ -1.05
Hoxd3P09027 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC8.5□□□□□ -1.05
Hoxd3P09027 Gm16363-201ENSMUST00000132460 877 ntBASIC8.5□□□□□ -1.05
Hoxd3P09027 Gm15122-201ENSMUST00000135434 462 ntTSL 2 BASIC8.5□□□□□ -1.05
Hoxd3P09027 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
Hoxd3P09027 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC8.5□□□□□ -1.05
Hoxd3P09027 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC8.5□□□□□ -1.05
Hoxd3P09027 Gm17164-201ENSMUST00000169013 506 ntBASIC8.5□□□□□ -1.05
Hoxd3P09027 Ighv2-1-201ENSMUST00000170946 353 ntBASIC8.5□□□□□ -1.05
Hoxd3P09027 Gm26692-201ENSMUST00000180428 688 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Hoxd3P09027 Gm5946-201ENSMUST00000182340 970 ntBASIC8.5□□□□□ -1.05
Hoxd3P09027 Gm19927-201ENSMUST00000185792 781 ntBASIC8.5□□□□□ -1.05
Hoxd3P09027 Gm29243-201ENSMUST00000188318 418 ntTSL 5 BASIC8.5□□□□□ -1.05
Hoxd3P09027 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Hoxd3P09027 Gm6680-201ENSMUST00000192789 950 ntBASIC8.5□□□□□ -1.05
Hoxd3P09027 Gm19066-201ENSMUST00000193232 1078 ntBASIC8.5□□□□□ -1.05
Hoxd3P09027 Gm8023-201ENSMUST00000195298 903 ntBASIC8.5□□□□□ -1.05
Hoxd3P09027 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC8.5□□□□□ -1.05
Hoxd3P09027 E330037G11Rik-201ENSMUST00000204295 1086 ntBASIC8.5□□□□□ -1.05
Hoxd3P09027 Gm43912-201ENSMUST00000204352 538 ntBASIC8.5□□□□□ -1.05
Hoxd3P09027 0610033M10Rik-202ENSMUST00000205236 1102 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Hoxd3P09027 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC8.5□□□□□ -1.05
Hoxd3P09027 Gm44688-201ENSMUST00000209083 537 ntBASIC8.5□□□□□ -1.05
Hoxd3P09027 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Hoxd3P09027 AC155259.1-201ENSMUST00000214794 477 ntBASIC8.5□□□□□ -1.05
Hoxd3P09027 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC8.5□□□□□ -1.05
Hoxd3P09027 Gm19186-201ENSMUST00000219922 333 ntBASIC8.5□□□□□ -1.05
Hoxd3P09027 AC211878.3-201ENSMUST00000222629 2018 ntBASIC8.5□□□□□ -1.05
Hoxd3P09027 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Hoxd3P09027 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Hoxd3P09027 AC167977.2-201ENSMUST00000225676 682 ntBASIC8.5□□□□□ -1.05
Hoxd3P09027 Gm5087-204ENSMUST00000225820 645 ntBASIC8.5□□□□□ -1.05
Hoxd3P09027 Gm26670-202ENSMUST00000226862 340 ntBASIC8.5□□□□□ -1.05
Hoxd3P09027 AC107711.1-201ENSMUST00000227258 1295 ntBASIC8.5□□□□□ -1.05
Hoxd3P09027 Ms4a7-201ENSMUST00000025574 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Hoxd3P09027 Myl1-201ENSMUST00000027151 1082 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Hoxd3P09027 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Hoxd3P09027 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Hoxd3P09027 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Hoxd3P09027 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Hoxd3P09027 Gm5148-201ENSMUST00000079755 1265 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Hoxd3P09027 Gm25201-201ENSMUST00000083093 170 ntBASIC8.5□□□□□ -1.05
Hoxd3P09027 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Hoxd3P09027 Olfr1100-201ENSMUST00000094913 969 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Hoxd3P09027 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Hoxd3P09027 Celsr3-201ENSMUST00000024238 11547 ntAPPRIS P2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Hoxd3P09027 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
Hoxd3P09027 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Hoxd3P09027 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Hoxd3P09027 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Hoxd3P09027 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Hoxd3P09027 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Hoxd3P09027 AC174797.1-201ENSMUST00000224339 1649 ntBASIC8.5□□□□□ -1.05
Hoxd3P09027 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
Hoxd3P09027 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Hoxd3P09027 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Hoxd3P09027 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Hoxd3P09027 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Hoxd3P09027 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Hoxd3P09027 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC8.5□□□□□ -1.05
Hoxd3P09027 Phf21a-202ENSMUST00000068702 6023 ntAPPRIS P3 TSL 5 BASIC8.5□□□□□ -1.05
Hoxd3P09027 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Hoxd3P09027 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Hoxd3P09027 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Hoxd3P09027 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Hoxd3P09027 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Hoxd3P09027 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Hoxd3P09027 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Hoxd3P09027 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Hoxd3P09027 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
Hoxd3P09027 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
Hoxd3P09027 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Hoxd3P09027 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
Hoxd3P09027 Gm43178-201ENSMUST00000197257 1386 ntBASIC8.49□□□□□ -1.05
Hoxd3P09027 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Hoxd3P09027 Zfp983-201ENSMUST00000039726 1383 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Hoxd3P09027 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Hoxd3P09027 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC8.49□□□□□ -1.05
Hoxd3P09027 Zwilch-211ENSMUST00000176794 1746 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
Hoxd3P09027 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Hoxd3P09027 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Hoxd3P09027 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Hoxd3P09027 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Hoxd3P09027 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Hoxd3P09027 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Hoxd3P09027 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Hoxd3P09027 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Hoxd3P09027 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Hoxd3P09027 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC8.49□□□□□ -1.05
Hoxd3P09027 Spred1-202ENSMUST00000110901 1440 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Hoxd3P09027 Gm44056-201ENSMUST00000204623 1427 ntBASIC8.49□□□□□ -1.05
Hoxd3P09027 Gm21939-201ENSMUST00000221137 2773 ntBASIC8.49□□□□□ -1.05
Hoxd3P09027 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Hoxd3P09027 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
Hoxd3P09027 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Hoxd3P09027 Gm13019-201ENSMUST00000120000 276 ntBASIC8.49□□□□□ -1.05
Hoxd3P09027 Gm14993-201ENSMUST00000121180 164 ntBASIC8.49□□□□□ -1.05
Hoxd3P09027 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC8.49□□□□□ -1.05
Hoxd3P09027 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC8.49□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms