Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Fcer1g-201ENSMUST00000079957 674 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rc3h1Q4VGL6 Nutf2-ps1-201ENSMUST00000095978 864 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Rc3h1Q4VGL6 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rc3h1Q4VGL6 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC12.11□□□□□ -0.47
Rc3h1Q4VGL6 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rc3h1Q4VGL6 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Rc3h1Q4VGL6 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rc3h1Q4VGL6 Dzip1l-204ENSMUST00000112886 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rc3h1Q4VGL6 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rc3h1Q4VGL6 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rc3h1Q4VGL6 Ampd3-206ENSMUST00000170374 3489 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rc3h1Q4VGL6 Zfp956-201ENSMUST00000101445 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rc3h1Q4VGL6 Bbs7-201ENSMUST00000040148 2599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rc3h1Q4VGL6 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Rc3h1Q4VGL6 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rc3h1Q4VGL6 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Rc3h1Q4VGL6 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rc3h1Q4VGL6 Spata33-207ENSMUST00000212760 4074 ntBASIC12.11□□□□□ -0.47
Rc3h1Q4VGL6 Gm8848-201ENSMUST00000197270 1343 ntBASIC12.11□□□□□ -0.47
Rc3h1Q4VGL6 Gm8725-201ENSMUST00000221829 1333 ntBASIC12.11□□□□□ -0.47
Rc3h1Q4VGL6 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rc3h1Q4VGL6 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rc3h1Q4VGL6 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Rc3h1Q4VGL6 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rc3h1Q4VGL6 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rc3h1Q4VGL6 Phf20-ps-201ENSMUST00000185066 2886 ntBASIC12.1□□□□□ -0.47
Rc3h1Q4VGL6 Cpvl-201ENSMUST00000166545 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rc3h1Q4VGL6 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rc3h1Q4VGL6 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rc3h1Q4VGL6 Galntl5-202ENSMUST00000114965 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rc3h1Q4VGL6 Gm15604-201ENSMUST00000118350 1456 ntBASIC12.1□□□□□ -0.47
Rc3h1Q4VGL6 4833412K13Rik-201ENSMUST00000195509 1479 ntBASIC12.1□□□□□ -0.47
Rc3h1Q4VGL6 Efna1-201ENSMUST00000029566 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rc3h1Q4VGL6 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Rc3h1Q4VGL6 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Rc3h1Q4VGL6 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rc3h1Q4VGL6 Gm32200-201ENSMUST00000192778 2385 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rc3h1Q4VGL6 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rc3h1Q4VGL6 Gm23439-201ENSMUST00000104292 132 ntBASIC12.1□□□□□ -0.47
Rc3h1Q4VGL6 Olfr874-201ENSMUST00000115004 933 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Rc3h1Q4VGL6 Ndufb5-202ENSMUST00000121778 574 ntTSL 3 BASIC12.1□□□□□ -0.47
Rc3h1Q4VGL6 Polr1c-203ENSMUST00000124655 829 ntTSL 5 BASIC12.1□□□□□ -0.47
Rc3h1Q4VGL6 Gm6471-202ENSMUST00000148734 587 ntTSL 2 BASIC12.1□□□□□ -0.47
Rc3h1Q4VGL6 Gm14341-201ENSMUST00000154616 667 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rc3h1Q4VGL6 Muc2-202ENSMUST00000167366 711 ntTSL 5 BASIC12.1□□□□□ -0.47
Rc3h1Q4VGL6 Tmem229b-ps-201ENSMUST00000168554 506 ntBASIC12.1□□□□□ -0.47
Rc3h1Q4VGL6 1700052H01Rik-201ENSMUST00000196142 717 ntTSL 3 BASIC12.1□□□□□ -0.47
Rc3h1Q4VGL6 Gm9409-201ENSMUST00000197017 316 ntBASIC12.1□□□□□ -0.47
Rc3h1Q4VGL6 Gm5738-201ENSMUST00000206016 779 ntBASIC12.1□□□□□ -0.47
Rc3h1Q4VGL6 Gm44845-201ENSMUST00000208773 335 ntBASIC12.1□□□□□ -0.47
Rc3h1Q4VGL6 AC153899.1-201ENSMUST00000214092 1117 ntBASIC12.1□□□□□ -0.47
Rc3h1Q4VGL6 AC153522.1-201ENSMUST00000220047 1090 ntBASIC12.1□□□□□ -0.47
Rc3h1Q4VGL6 AC125409.3-201ENSMUST00000223488 653 ntBASIC12.1□□□□□ -0.47
Rc3h1Q4VGL6 AC165092.1-201ENSMUST00000224018 486 ntBASIC12.1□□□□□ -0.47
Rc3h1Q4VGL6 CT030135.2-201ENSMUST00000225255 893 ntBASIC12.1□□□□□ -0.47
Rc3h1Q4VGL6 AC158388.1-201ENSMUST00000225441 256 ntBASIC12.1□□□□□ -0.47
Rc3h1Q4VGL6 Krtap9-1-201ENSMUST00000093936 1044 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Rc3h1Q4VGL6 Psat1-205ENSMUST00000162053 2291 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rc3h1Q4VGL6 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Rc3h1Q4VGL6 Fcrl1-202ENSMUST00000163661 1649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rc3h1Q4VGL6 Gm32511-202ENSMUST00000217021 2069 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rc3h1Q4VGL6 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC12.1□□□□□ -0.47
Rc3h1Q4VGL6 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rc3h1Q4VGL6 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rc3h1Q4VGL6 6030469F06Rik-202ENSMUST00000218473 1537 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rc3h1Q4VGL6 H2-T3-204ENSMUST00000102675 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rc3h1Q4VGL6 AC130671.3-201ENSMUST00000227393 1897 ntBASIC12.1□□□□□ -0.47
Rc3h1Q4VGL6 Spert-201ENSMUST00000035243 1430 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rc3h1Q4VGL6 Akap3-203ENSMUST00000202878 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rc3h1Q4VGL6 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
Rc3h1Q4VGL6 Gba-201ENSMUST00000077367 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rc3h1Q4VGL6 Dgkh-201ENSMUST00000074729 3967 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Rc3h1Q4VGL6 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rc3h1Q4VGL6 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rc3h1Q4VGL6 Gm45501-201ENSMUST00000211468 2526 ntBASIC12.09□□□□□ -0.47
Rc3h1Q4VGL6 Gabrr2-201ENSMUST00000024035 1820 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rc3h1Q4VGL6 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rc3h1Q4VGL6 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rc3h1Q4VGL6 Gm31138-201ENSMUST00000212296 1705 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rc3h1Q4VGL6 Pgbd5-206ENSMUST00000172566 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rc3h1Q4VGL6 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rc3h1Q4VGL6 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rc3h1Q4VGL6 Gm2030-201ENSMUST00000119590 1129 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Rc3h1Q4VGL6 Gm15015-201ENSMUST00000135491 636 ntTSL 3 BASIC12.09□□□□□ -0.47
Rc3h1Q4VGL6 Gm15020-201ENSMUST00000147142 636 ntTSL 3 BASIC12.09□□□□□ -0.47
Rc3h1Q4VGL6 Eif4e1b-210ENSMUST00000152204 859 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rc3h1Q4VGL6 Gm16268-201ENSMUST00000159445 1157 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rc3h1Q4VGL6 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rc3h1Q4VGL6 Rab26-204ENSMUST00000176533 965 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Rc3h1Q4VGL6 Gm5335-201ENSMUST00000182995 1000 ntBASIC12.09□□□□□ -0.47
Rc3h1Q4VGL6 Gm28179-201ENSMUST00000188365 613 ntBASIC12.09□□□□□ -0.47
Rc3h1Q4VGL6 Gm28079-206ENSMUST00000188554 1170 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Rc3h1Q4VGL6 Gm33707-201ENSMUST00000195135 569 ntBASIC12.09□□□□□ -0.47
Rc3h1Q4VGL6 Gatad1-204ENSMUST00000196304 704 ntTSL 3 BASIC12.09□□□□□ -0.47
Rc3h1Q4VGL6 Gm44236-201ENSMUST00000204492 513 ntBASIC12.09□□□□□ -0.47
Rc3h1Q4VGL6 Olfr1480-203ENSMUST00000207904 1209 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
Rc3h1Q4VGL6 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC12.09□□□□□ -0.47
Rc3h1Q4VGL6 AC165256.1-201ENSMUST00000216687 670 ntTSL 2 BASIC12.09□□□□□ -0.47
Rc3h1Q4VGL6 Gm4930-201ENSMUST00000219926 1087 ntBASIC12.09□□□□□ -0.47
Rc3h1Q4VGL6 Olfr1394-201ENSMUST00000052668 939 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 196 ms