Protein–RNA interactions for Protein: P04940

Ig kappa chain V-VI region NQ2-17.4.1, mousemouse

Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04940 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
P04940 Gm13688-201ENSMUST00000121557 608 ntBASIC8.37□□□□□ -1.07
P04940 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC8.37□□□□□ -1.07
P04940 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
P04940 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC8.37□□□□□ -1.07
P04940 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC8.37□□□□□ -1.07
P04940 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC8.37□□□□□ -1.07
P04940 Gm17070-201ENSMUST00000170463 784 ntBASIC8.37□□□□□ -1.07
P04940 Tcl1-203ENSMUST00000175652 535 ntTSL 2 BASIC8.37□□□□□ -1.07
P04940 Mir7032-201ENSMUST00000185154 79 ntBASIC8.37□□□□□ -1.07
P04940 Gm3527-201ENSMUST00000198905 460 ntBASIC8.37□□□□□ -1.07
P04940 Gm7344-201ENSMUST00000212122 1222 ntBASIC8.37□□□□□ -1.07
P04940 AC162932.1-201ENSMUST00000219209 872 ntBASIC8.37□□□□□ -1.07
P04940 AC140293.1-201ENSMUST00000225626 1247 ntBASIC8.37□□□□□ -1.07
P04940 AC101205.2-201ENSMUST00000226206 715 ntBASIC8.37□□□□□ -1.07
P04940 Ccl27a-201ENSMUST00000074387 405 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
P04940 Gm25201-201ENSMUST00000083093 170 ntBASIC8.37□□□□□ -1.07
P04940 Sh2d6-201ENSMUST00000089687 1162 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
P04940 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
P04940 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC8.37□□□□□ -1.07
P04940 Rbfox2-203ENSMUST00000166610 6573 ntAPPRIS P2 TSL 1 (best) BASIC8.37□□□□□ -1.07
P04940 D030055H07Rik-202ENSMUST00000150953 4325 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
P04940 Agbl4-203ENSMUST00000106587 2631 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
P04940 Slc19a1-208ENSMUST00000136925 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
P04940 Tmem87a-201ENSMUST00000090042 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
P04940 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
P04940 Brpf1-208ENSMUST00000203577 4468 ntTSL 5 BASIC8.37□□□□□ -1.07
P04940 Gm37333-201ENSMUST00000192904 2251 ntBASIC8.37□□□□□ -1.07
P04940 Car13-201ENSMUST00000029071 2299 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
P04940 Adra1a-205ENSMUST00000161339 2788 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
P04940 9630001P10Rik-201ENSMUST00000181083 2799 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
P04940 Foxr1-201ENSMUST00000098837 1968 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
P04940 Gpm6b-205ENSMUST00000112227 3294 ntAPPRIS ALT1 TSL 1 (best) BASIC8.37□□□□□ -1.07
P04940 Gm42571-201ENSMUST00000201197 2464 ntBASIC8.37□□□□□ -1.07
P04940 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
P04940 Lrpap1-201ENSMUST00000030986 2981 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
P04940 Ctcfl-201ENSMUST00000094287 3217 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
P04940 Ggct-202ENSMUST00000131475 3960 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
P04940 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
P04940 Slc6a12-201ENSMUST00000032200 2644 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
P04940 Slc18a1-201ENSMUST00000037478 3115 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
P04940 Gm38034-201ENSMUST00000193915 2069 ntBASIC8.36□□□□□ -1.07
P04940 Ppm1b-203ENSMUST00000112305 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
P04940 Rsrc2-208ENSMUST00000182309 1595 ntTSL 5 BASIC8.36□□□□□ -1.07
P04940 Anapc15-213ENSMUST00000178851 2797 ntTSL 2 BASIC8.36□□□□□ -1.07
P04940 Rbm3-201ENSMUST00000040010 2792 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
P04940 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
P04940 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
P04940 Myo18a-208ENSMUST00000108375 7513 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
P04940 Slc17a3-203ENSMUST00000110422 1764 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
P04940 Cep70-207ENSMUST00000190715 1768 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
P04940 Gm13694-201ENSMUST00000178533 2493 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
P04940 Gm13693-201ENSMUST00000178960 2493 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
P04940 Gm13698-202ENSMUST00000179192 2493 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
P04940 Gm13696-202ENSMUST00000180347 2493 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
P04940 Gm13691-201ENSMUST00000099947 2493 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
P04940 Gm13697-201ENSMUST00000099948 2493 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
P04940 Gm13695-201ENSMUST00000099951 2493 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
P04940 Mkks-202ENSMUST00000110089 3178 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
P04940 Top1-201ENSMUST00000109468 3856 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
P04940 6030469F06Rik-202ENSMUST00000218473 1537 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
P04940 Ribc1-201ENSMUST00000026288 1508 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
P04940 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
P04940 Gtf2i-222ENSMUST00000174354 4084 ntAPPRIS ALT2 TSL 2 BASIC8.36□□□□□ -1.07
P04940 Dcstamp-201ENSMUST00000022913 1997 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
P04940 Ins2-202ENSMUST00000105930 583 ntTSL 3 BASIC8.36□□□□□ -1.07
P04940 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
P04940 Msrb1-202ENSMUST00000115262 886 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
P04940 Ywhaq-ps3-201ENSMUST00000120944 738 ntBASIC8.36□□□□□ -1.07
P04940 Ppt1-204ENSMUST00000121870 986 ntTSL 2 BASIC8.36□□□□□ -1.07
P04940 Gm12628-201ENSMUST00000122193 382 ntBASIC8.36□□□□□ -1.07
P04940 Gm15620-201ENSMUST00000122949 270 ntBASIC8.36□□□□□ -1.07
P04940 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC8.36□□□□□ -1.07
P04940 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
P04940 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
P04940 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC8.36□□□□□ -1.07
P04940 Gm9162-201ENSMUST00000182081 991 ntBASIC8.36□□□□□ -1.07
P04940 Gm6771-201ENSMUST00000182716 1001 ntBASIC8.36□□□□□ -1.07
P04940 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC8.36□□□□□ -1.07
P04940 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
P04940 Gm28857-201ENSMUST00000188068 425 ntTSL 3 BASIC8.36□□□□□ -1.07
P04940 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
P04940 Cdk5-203ENSMUST00000198990 783 ntTSL 5 BASIC8.36□□□□□ -1.07
P04940 Eif3k-204ENSMUST00000208616 909 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
P04940 Gm18001-201ENSMUST00000212023 688 ntBASIC8.36□□□□□ -1.07
P04940 AC168279.1-201ENSMUST00000214611 382 ntBASIC8.36□□□□□ -1.07
P04940 AC164556.1-201ENSMUST00000221318 751 ntBASIC8.36□□□□□ -1.07
P04940 Gm7959-201ENSMUST00000221823 1078 ntBASIC8.36□□□□□ -1.07
P04940 Gm36862-204ENSMUST00000223365 642 ntTSL 3 BASIC8.36□□□□□ -1.07
P04940 AC117769.1-201ENSMUST00000224716 1120 ntBASIC8.36□□□□□ -1.07
P04940 Crip1-201ENSMUST00000006523 445 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
P04940 Haao-201ENSMUST00000000687 1222 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
P04940 Olfr709-ps1-201ENSMUST00000072368 924 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
P04940 Gm5449-201ENSMUST00000081132 357 ntBASIC8.36□□□□□ -1.07
P04940 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
P04940 P2rx7-202ENSMUST00000086247 712 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
P04940 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
P04940 Gemin8-203ENSMUST00000096252 1039 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
P04940 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
P04940 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC8.36□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms