Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Itgb3O54890 Gm42849-201ENSMUST00000202834 1584 ntTSL 5 BASIC10.99□□□□□ -0.65
Itgb3O54890 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Itgb3O54890 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Itgb3O54890 Gmip-202ENSMUST00000123453 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Itgb3O54890 Vwce-201ENSMUST00000055115 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Itgb3O54890 Rnf216-201ENSMUST00000053498 4474 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Itgb3O54890 Nod1-202ENSMUST00000168172 4064 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Itgb3O54890 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Itgb3O54890 Gm13498-201ENSMUST00000119159 2166 ntBASIC10.99□□□□□ -0.65
Itgb3O54890 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Itgb3O54890 Slc16a7-202ENSMUST00000105257 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Itgb3O54890 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Itgb3O54890 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Itgb3O54890 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC10.99□□□□□ -0.65
Itgb3O54890 Gm13792-201ENSMUST00000121350 423 ntBASIC10.99□□□□□ -0.65
Itgb3O54890 Gm12207-201ENSMUST00000143016 494 ntTSL 2 BASIC10.99□□□□□ -0.65
Itgb3O54890 Gm16268-201ENSMUST00000159445 1157 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Itgb3O54890 Gm16581-201ENSMUST00000160730 991 ntBASIC10.99□□□□□ -0.65
Itgb3O54890 Mir6953-201ENSMUST00000184745 68 ntBASIC10.99□□□□□ -0.65
Itgb3O54890 Gm18443-201ENSMUST00000185358 556 ntBASIC10.99□□□□□ -0.65
Itgb3O54890 Mrgprx3-ps-201ENSMUST00000187741 918 ntBASIC10.99□□□□□ -0.65
Itgb3O54890 Gm8525-201ENSMUST00000189674 861 ntBASIC10.99□□□□□ -0.65
Itgb3O54890 Rhoc-205ENSMUST00000196817 877 ntAPPRIS P1 TSL 3 BASIC10.99□□□□□ -0.65
Itgb3O54890 Fkbp6-202ENSMUST00000201534 1287 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Itgb3O54890 AC241616.1-201ENSMUST00000213741 166 ntBASIC10.99□□□□□ -0.65
Itgb3O54890 AC107752.1-201ENSMUST00000219362 469 ntBASIC10.99□□□□□ -0.65
Itgb3O54890 AC154759.1-201ENSMUST00000224137 1159 ntBASIC10.99□□□□□ -0.65
Itgb3O54890 Ndufc1-201ENSMUST00000038108 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Itgb3O54890 Gm22341-201ENSMUST00000083775 129 ntBASIC10.99□□□□□ -0.65
Itgb3O54890 Foxr1-201ENSMUST00000098837 1968 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Itgb3O54890 Smarca5-ps-201ENSMUST00000121843 3123 ntBASIC10.99□□□□□ -0.65
Itgb3O54890 Trim34a-201ENSMUST00000060315 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Itgb3O54890 Galntl5-202ENSMUST00000114965 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Itgb3O54890 Gstm4-203ENSMUST00000178808 1462 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Itgb3O54890 Mblac2-201ENSMUST00000057598 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Itgb3O54890 Nrf1-201ENSMUST00000004761 1589 ntTSL 5 BASIC10.99□□□□□ -0.65
Itgb3O54890 Cstf1-201ENSMUST00000116375 3451 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Itgb3O54890 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Itgb3O54890 Hsdl1-204ENSMUST00000212517 2215 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Itgb3O54890 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Itgb3O54890 Zmym6-201ENSMUST00000046751 4210 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Itgb3O54890 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Itgb3O54890 Mthfd1l-203ENSMUST00000120585 3687 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Itgb3O54890 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Itgb3O54890 Ttll9-201ENSMUST00000099197 1797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Itgb3O54890 Gm5703-201ENSMUST00000186658 3973 ntBASIC10.98□□□□□ -0.65
Itgb3O54890 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Itgb3O54890 AC123738.2-201ENSMUST00000223791 1899 ntBASIC10.98□□□□□ -0.65
Itgb3O54890 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Itgb3O54890 Srrm4-202ENSMUST00000139425 2798 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Itgb3O54890 Avil-203ENSMUST00000129173 2925 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Itgb3O54890 Hist1h4i-201ENSMUST00000102977 727 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Itgb3O54890 1700025C18Rik-201ENSMUST00000109304 702 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Itgb3O54890 Slc25a21-202ENSMUST00000110680 918 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Itgb3O54890 Gm12733-201ENSMUST00000119871 767 ntBASIC10.98□□□□□ -0.65
Itgb3O54890 Rnasek-203ENSMUST00000141880 465 ntTSL 2 BASIC10.98□□□□□ -0.65
Itgb3O54890 Gm23582-201ENSMUST00000158530 139 ntBASIC10.98□□□□□ -0.65
Itgb3O54890 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC10.98□□□□□ -0.65
Itgb3O54890 Gm4705-201ENSMUST00000177415 354 ntBASIC10.98□□□□□ -0.65
Itgb3O54890 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Itgb3O54890 Gm4960-201ENSMUST00000182928 1001 ntBASIC10.98□□□□□ -0.65
Itgb3O54890 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC10.98□□□□□ -0.65
Itgb3O54890 Gm21149-201ENSMUST00000197995 1212 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Itgb3O54890 Gm18862-201ENSMUST00000204643 933 ntBASIC10.98□□□□□ -0.65
Itgb3O54890 Usp47-206ENSMUST00000215510 4697 ntTSL 5 BASIC10.98□□□□□ -0.65
Itgb3O54890 Olfr1227-ps1-201ENSMUST00000215627 928 ntBASIC10.98□□□□□ -0.65
Itgb3O54890 Gm19121-201ENSMUST00000215720 1022 ntBASIC10.98□□□□□ -0.65
Itgb3O54890 Gm18165-201ENSMUST00000217426 928 ntBASIC10.98□□□□□ -0.65
Itgb3O54890 AC155709.2-201ENSMUST00000219360 678 ntTSL 3 BASIC10.98□□□□□ -0.65
Itgb3O54890 AC134439.3-201ENSMUST00000223486 851 ntTSL 5 BASIC10.98□□□□□ -0.65
Itgb3O54890 AC165092.1-201ENSMUST00000224018 486 ntBASIC10.98□□□□□ -0.65
Itgb3O54890 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Itgb3O54890 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Itgb3O54890 Gm43817-201ENSMUST00000196459 2262 ntBASIC10.98□□□□□ -0.65
Itgb3O54890 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Itgb3O54890 Plxna3-201ENSMUST00000004326 6943 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Itgb3O54890 AC122382.1-201ENSMUST00000225869 2371 ntBASIC10.98□□□□□ -0.65
Itgb3O54890 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC10.98□□□□□ -0.65
Itgb3O54890 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC10.98□□□□□ -0.65
Itgb3O54890 Ppp6c-205ENSMUST00000204701 1495 ntTSL 5 BASIC10.98□□□□□ -0.65
Itgb3O54890 Rxfp2-202ENSMUST00000110496 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Itgb3O54890 Nrap-202ENSMUST00000073536 5501 ntAPPRIS P4 TSL 1 (best) BASIC10.98□□□□□ -0.65
Itgb3O54890 Dido1-204ENSMUST00000103055 4613 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Itgb3O54890 Pou2f1-204ENSMUST00000111426 2671 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Itgb3O54890 Stox2-206ENSMUST00000210030 2734 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Itgb3O54890 St6galnac2-206ENSMUST00000144398 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Itgb3O54890 Dhcr7-211ENSMUST00000207143 1652 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Itgb3O54890 AC122367.1-201ENSMUST00000221978 1709 ntBASIC10.98□□□□□ -0.65
Itgb3O54890 Cfap100-201ENSMUST00000062750 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Itgb3O54890 Exoc7-201ENSMUST00000021147 3337 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Itgb3O54890 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Itgb3O54890 Myo18a-208ENSMUST00000108375 7513 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Itgb3O54890 Armc8-202ENSMUST00000185524 2820 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Itgb3O54890 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Itgb3O54890 Acvr1-203ENSMUST00000112599 2891 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Itgb3O54890 Dcun1d2-202ENSMUST00000110838 2955 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Itgb3O54890 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Itgb3O54890 Supt7l-205ENSMUST00000202421 3056 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Itgb3O54890 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms