Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC10.83□□□□□ -0.68
Chmp2aQ9DB34 Gm37583-201ENSMUST00000195460 2487 ntBASIC10.83□□□□□ -0.68
Chmp2aQ9DB34 Zfyve26-201ENSMUST00000021547 9391 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chmp2aQ9DB34 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chmp2aQ9DB34 Erbb4-202ENSMUST00000121473 12037 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chmp2aQ9DB34 Gm26637-201ENSMUST00000180880 2289 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Chmp2aQ9DB34 Clasp2-203ENSMUST00000166734 4108 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.68
Chmp2aQ9DB34 Gm7052-201ENSMUST00000167568 1512 ntBASIC10.83□□□□□ -0.68
Chmp2aQ9DB34 Gm7967-202ENSMUST00000191042 5042 ntBASIC10.83□□□□□ -0.68
Chmp2aQ9DB34 Itgad-204ENSMUST00000177111 3845 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Chmp2aQ9DB34 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC10.83□□□□□ -0.68
Chmp2aQ9DB34 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chmp2aQ9DB34 Hdac9-206ENSMUST00000209990 3072 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Chmp2aQ9DB34 Nfkbiz-204ENSMUST00000114458 3627 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chmp2aQ9DB34 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Chmp2aQ9DB34 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chmp2aQ9DB34 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC10.82□□□□□ -0.68
Chmp2aQ9DB34 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chmp2aQ9DB34 Chrm5-201ENSMUST00000099589 1599 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Chmp2aQ9DB34 Itga3-202ENSMUST00000107739 4636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chmp2aQ9DB34 Copa-206ENSMUST00000135192 4622 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chmp2aQ9DB34 Git2-203ENSMUST00000112183 4886 ntTSL 5 BASIC10.82□□□□□ -0.68
Chmp2aQ9DB34 Dzank1-201ENSMUST00000081982 6847 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chmp2aQ9DB34 Atp7b-201ENSMUST00000006742 6505 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chmp2aQ9DB34 Ccdc15-202ENSMUST00000213633 3331 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Chmp2aQ9DB34 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Chmp2aQ9DB34 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC10.82□□□□□ -0.68
Chmp2aQ9DB34 4921508D12Rik-201ENSMUST00000124095 1075 ntTSL 2 BASIC10.82□□□□□ -0.68
Chmp2aQ9DB34 Gm15912-201ENSMUST00000128914 578 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Chmp2aQ9DB34 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Chmp2aQ9DB34 Tnnt1-206ENSMUST00000163710 885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chmp2aQ9DB34 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Chmp2aQ9DB34 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Chmp2aQ9DB34 Dnajc4-202ENSMUST00000179118 840 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chmp2aQ9DB34 Gm9507-202ENSMUST00000180157 654 ntBASIC10.82□□□□□ -0.68
Chmp2aQ9DB34 Gm7928-201ENSMUST00000181249 701 ntBASIC10.82□□□□□ -0.68
Chmp2aQ9DB34 4930517L18Rik-201ENSMUST00000191880 482 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Chmp2aQ9DB34 Gm8625-201ENSMUST00000194185 1077 ntBASIC10.82□□□□□ -0.68
Chmp2aQ9DB34 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Chmp2aQ9DB34 Gm6069-201ENSMUST00000196501 463 ntBASIC10.82□□□□□ -0.68
Chmp2aQ9DB34 AC124457.1-201ENSMUST00000198845 120 ntBASIC10.82□□□□□ -0.68
Chmp2aQ9DB34 Ghrl-205ENSMUST00000204163 447 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chmp2aQ9DB34 Chac2-201ENSMUST00000020553 1018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chmp2aQ9DB34 AC113291.2-201ENSMUST00000215490 1205 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Chmp2aQ9DB34 Gm8557-201ENSMUST00000220777 475 ntBASIC10.82□□□□□ -0.68
Chmp2aQ9DB34 Nsmce2-203ENSMUST00000227173 1122 ntBASIC10.82□□□□□ -0.68
Chmp2aQ9DB34 Rps3a2-201ENSMUST00000074245 792 ntBASIC10.82□□□□□ -0.68
Chmp2aQ9DB34 Olfr1313-201ENSMUST00000099599 938 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Chmp2aQ9DB34 AC154640.1-203ENSMUST00000228316 1618 ntBASIC10.82□□□□□ -0.68
Chmp2aQ9DB34 Scmh1-203ENSMUST00000106298 1995 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chmp2aQ9DB34 Bfar-201ENSMUST00000023365 3003 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chmp2aQ9DB34 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC10.82□□□□□ -0.68
Chmp2aQ9DB34 Pdzd7-202ENSMUST00000145391 4088 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Chmp2aQ9DB34 Gpr75-201ENSMUST00000109430 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chmp2aQ9DB34 Ubash3a-201ENSMUST00000048656 2945 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chmp2aQ9DB34 Acan-201ENSMUST00000032835 7355 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chmp2aQ9DB34 Slx1b-203ENSMUST00000144897 3152 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chmp2aQ9DB34 Fam227a-203ENSMUST00000109648 5187 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Chmp2aQ9DB34 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Chmp2aQ9DB34 Scml4-201ENSMUST00000063063 4885 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chmp2aQ9DB34 Gm5472-201ENSMUST00000178604 1678 ntBASIC10.82□□□□□ -0.68
Chmp2aQ9DB34 Smpd4-219ENSMUST00000170366 2256 ntTSL 5 BASIC10.82□□□□□ -0.68
Chmp2aQ9DB34 Gpm6b-201ENSMUST00000060210 2858 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chmp2aQ9DB34 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chmp2aQ9DB34 4930517J16Rik-201ENSMUST00000193095 1568 ntBASIC10.82□□□□□ -0.68
Chmp2aQ9DB34 AC140462.2-201ENSMUST00000225718 2433 ntBASIC10.82□□□□□ -0.68
Chmp2aQ9DB34 4932438H23Rik-201ENSMUST00000035689 2684 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chmp2aQ9DB34 Dcun1d4-203ENSMUST00000113558 4023 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Chmp2aQ9DB34 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Chmp2aQ9DB34 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chmp2aQ9DB34 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chmp2aQ9DB34 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Chmp2aQ9DB34 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Chmp2aQ9DB34 Acnat1-201ENSMUST00000095086 1499 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chmp2aQ9DB34 Bcorl1-203ENSMUST00000136348 7446 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Chmp2aQ9DB34 Dysf-204ENSMUST00000113821 6803 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Chmp2aQ9DB34 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
Chmp2aQ9DB34 Gm10463-202ENSMUST00000195772 2889 ntBASIC10.81□□□□□ -0.68
Chmp2aQ9DB34 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chmp2aQ9DB34 Adamts13-202ENSMUST00000102891 4506 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chmp2aQ9DB34 Nrros-204ENSMUST00000126869 2540 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chmp2aQ9DB34 Gm30074-201ENSMUST00000193192 2541 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Chmp2aQ9DB34 Pzp-201ENSMUST00000112132 4681 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chmp2aQ9DB34 Car13-201ENSMUST00000029071 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chmp2aQ9DB34 Pole-202ENSMUST00000112481 1523 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Chmp2aQ9DB34 Mtmr7-205ENSMUST00000174205 2679 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Chmp2aQ9DB34 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chmp2aQ9DB34 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chmp2aQ9DB34 Lime1-202ENSMUST00000108804 960 ntTSL 3 BASIC10.81□□□□□ -0.68
Chmp2aQ9DB34 Gm11957-201ENSMUST00000118304 779 ntBASIC10.81□□□□□ -0.68
Chmp2aQ9DB34 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC10.81□□□□□ -0.68
Chmp2aQ9DB34 Ppt1-204ENSMUST00000121870 986 ntTSL 2 BASIC10.81□□□□□ -0.68
Chmp2aQ9DB34 Gm5860-201ENSMUST00000137810 1028 ntTSL 2 BASIC10.81□□□□□ -0.68
Chmp2aQ9DB34 Gm17231-201ENSMUST00000163186 645 ntTSL 3 BASIC10.81□□□□□ -0.68
Chmp2aQ9DB34 Gm26906-201ENSMUST00000180523 1228 ntTSL 5 BASIC10.81□□□□□ -0.68
Chmp2aQ9DB34 Ighv1-2-201ENSMUST00000195325 378 ntBASIC10.81□□□□□ -0.68
Chmp2aQ9DB34 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Chmp2aQ9DB34 Gm9619-201ENSMUST00000211587 762 ntBASIC10.81□□□□□ -0.68
Chmp2aQ9DB34 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC10.81□□□□□ -0.68
Chmp2aQ9DB34 AC174797.2-201ENSMUST00000225835 165 ntBASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms