Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC11.39□□□□□ -0.59
Trim9Q8C7M3 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trim9Q8C7M3 Bud31-203ENSMUST00000160075 928 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Trim9Q8C7M3 Vmn2r-ps13-201ENSMUST00000176920 606 ntBASIC11.39□□□□□ -0.59
Trim9Q8C7M3 Gm20821-202ENSMUST00000180352 684 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Trim9Q8C7M3 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trim9Q8C7M3 Rian-213ENSMUST00000182981 1219 ntTSL 5 BASIC11.39□□□□□ -0.59
Trim9Q8C7M3 Gm28893-201ENSMUST00000190951 1108 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trim9Q8C7M3 Gm37872-201ENSMUST00000192362 886 ntTSL 5 BASIC11.39□□□□□ -0.59
Trim9Q8C7M3 Gm3527-201ENSMUST00000198905 460 ntBASIC11.39□□□□□ -0.59
Trim9Q8C7M3 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC11.39□□□□□ -0.59
Trim9Q8C7M3 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trim9Q8C7M3 Gm4032-203ENSMUST00000211600 531 ntTSL 3 BASIC11.39□□□□□ -0.59
Trim9Q8C7M3 Gm7904-201ENSMUST00000217049 465 ntBASIC11.39□□□□□ -0.59
Trim9Q8C7M3 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Trim9Q8C7M3 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim9Q8C7M3 Gemin8-203ENSMUST00000096252 1039 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim9Q8C7M3 Elmo3-201ENSMUST00000109375 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim9Q8C7M3 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trim9Q8C7M3 Olfr30-202ENSMUST00000215691 2404 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Trim9Q8C7M3 D3Ertd751e-201ENSMUST00000026867 1989 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Trim9Q8C7M3 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trim9Q8C7M3 Hdac9-208ENSMUST00000211107 1683 ntTSL 5 BASIC11.39□□□□□ -0.59
Trim9Q8C7M3 Pole-202ENSMUST00000112481 1523 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trim9Q8C7M3 Gm43412-201ENSMUST00000197455 2818 ntBASIC11.39□□□□□ -0.59
Trim9Q8C7M3 Gramd1b-213ENSMUST00000211853 2659 ntTSL 5 BASIC11.39□□□□□ -0.59
Trim9Q8C7M3 Itgad-204ENSMUST00000177111 3845 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Trim9Q8C7M3 Pfkfb3-216ENSMUST00000191668 2216 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trim9Q8C7M3 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Trim9Q8C7M3 Gpr155-204ENSMUST00000112044 4201 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Trim9Q8C7M3 Gpr75-201ENSMUST00000109430 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim9Q8C7M3 Slc7a9-203ENSMUST00000118969 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim9Q8C7M3 Gm14023-201ENSMUST00000144178 1781 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trim9Q8C7M3 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim9Q8C7M3 Anxa6-202ENSMUST00000108883 2489 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim9Q8C7M3 Gm45663-201ENSMUST00000210429 1632 ntBASIC11.38□□□□□ -0.59
Trim9Q8C7M3 Casp14-201ENSMUST00000005488 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim9Q8C7M3 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Trim9Q8C7M3 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim9Q8C7M3 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim9Q8C7M3 Xrcc5-201ENSMUST00000027379 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim9Q8C7M3 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim9Q8C7M3 Vash2-202ENSMUST00000166139 3897 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim9Q8C7M3 Arhgap17-202ENSMUST00000106442 3336 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim9Q8C7M3 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trim9Q8C7M3 Cx3cl1-201ENSMUST00000034230 3315 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim9Q8C7M3 Cdc23-203ENSMUST00000133181 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim9Q8C7M3 Guca2b-202ENSMUST00000106309 697 ntAPPRIS ALT2 TSL 3 BASIC11.38□□□□□ -0.59
Trim9Q8C7M3 Mir1249-201ENSMUST00000116791 98 ntBASIC11.38□□□□□ -0.59
Trim9Q8C7M3 Gm13303-201ENSMUST00000117125 1284 ntBASIC11.38□□□□□ -0.59
Trim9Q8C7M3 Prelid3b-203ENSMUST00000120822 622 ntTSL 3 BASIC11.38□□□□□ -0.59
Trim9Q8C7M3 Gm6881-201ENSMUST00000121811 833 ntBASIC11.38□□□□□ -0.59
Trim9Q8C7M3 1810058I24Rik-201ENSMUST00000130875 690 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trim9Q8C7M3 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC11.38□□□□□ -0.59
Trim9Q8C7M3 Gm13412-201ENSMUST00000150621 677 ntTSL 3 BASIC11.38□□□□□ -0.59
Trim9Q8C7M3 Gm15641-201ENSMUST00000161407 670 ntTSL 3 BASIC11.38□□□□□ -0.59
Trim9Q8C7M3 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trim9Q8C7M3 Gm20455-201ENSMUST00000174100 1138 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trim9Q8C7M3 Gm25953-201ENSMUST00000175338 83 ntBASIC11.38□□□□□ -0.59
Trim9Q8C7M3 Gm9507-202ENSMUST00000180157 654 ntBASIC11.38□□□□□ -0.59
Trim9Q8C7M3 Gm7928-201ENSMUST00000181249 701 ntBASIC11.38□□□□□ -0.59
Trim9Q8C7M3 Gm3671-201ENSMUST00000182463 1007 ntBASIC11.38□□□□□ -0.59
Trim9Q8C7M3 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC11.38□□□□□ -0.59
Trim9Q8C7M3 Gm27833-201ENSMUST00000184285 124 ntBASIC11.38□□□□□ -0.59
Trim9Q8C7M3 Gm27316-201ENSMUST00000184884 277 ntBASIC11.38□□□□□ -0.59
Trim9Q8C7M3 Gm18555-201ENSMUST00000197935 584 ntBASIC11.38□□□□□ -0.59
Trim9Q8C7M3 Gm6794-201ENSMUST00000203829 457 ntBASIC11.38□□□□□ -0.59
Trim9Q8C7M3 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC11.38□□□□□ -0.59
Trim9Q8C7M3 AC100406.1-201ENSMUST00000217305 480 ntBASIC11.38□□□□□ -0.59
Trim9Q8C7M3 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC11.38□□□□□ -0.59
Trim9Q8C7M3 AC154184.3-201ENSMUST00000225620 1090 ntBASIC11.38□□□□□ -0.59
Trim9Q8C7M3 Ccl27a-201ENSMUST00000074387 405 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim9Q8C7M3 P2rx7-202ENSMUST00000086247 712 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trim9Q8C7M3 Olfr1189-201ENSMUST00000090700 921 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Trim9Q8C7M3 Msrb3-201ENSMUST00000092143 3843 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim9Q8C7M3 Atxn7l1-203ENSMUST00000110824 1675 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trim9Q8C7M3 Slc35b3-201ENSMUST00000021870 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim9Q8C7M3 AC124433.1-202ENSMUST00000224762 1535 ntBASIC11.38□□□□□ -0.59
Trim9Q8C7M3 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim9Q8C7M3 Cep70-207ENSMUST00000190715 1768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim9Q8C7M3 Vps33a-201ENSMUST00000031388 4235 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim9Q8C7M3 Dip2c-202ENSMUST00000169960 4801 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trim9Q8C7M3 Gm26690-201ENSMUST00000181457 1997 ntTSL 5 BASIC11.37□□□□□ -0.59
Trim9Q8C7M3 Foxr1-201ENSMUST00000098837 1968 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim9Q8C7M3 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC11.37□□□□□ -0.59
Trim9Q8C7M3 Extl1-201ENSMUST00000030643 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim9Q8C7M3 Prr27-202ENSMUST00000101056 1337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim9Q8C7M3 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim9Q8C7M3 Gm8848-201ENSMUST00000197270 1343 ntBASIC11.37□□□□□ -0.59
Trim9Q8C7M3 Prr27-201ENSMUST00000002310 1313 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim9Q8C7M3 Ms4a7-203ENSMUST00000067532 1334 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim9Q8C7M3 Lgals9-203ENSMUST00000108269 1586 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim9Q8C7M3 Lims1-201ENSMUST00000020077 1565 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trim9Q8C7M3 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trim9Q8C7M3 Gm42971-201ENSMUST00000199228 2079 ntBASIC11.37□□□□□ -0.59
Trim9Q8C7M3 Ncf2-201ENSMUST00000027754 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim9Q8C7M3 Hps4-202ENSMUST00000112359 3345 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Trim9Q8C7M3 Sdhc-202ENSMUST00000111336 3171 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim9Q8C7M3 Dclk1-213ENSMUST00000199702 2922 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trim9Q8C7M3 Akap1-203ENSMUST00000107904 2673 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms