Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rad54bQ6PFE3 Ank3-242ENSMUST00000183261 4999 ntTSL 5 BASIC10.41□□□□□ -0.74
Rad54bQ6PFE3 D030055H07Rik-202ENSMUST00000150953 4325 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Rad54bQ6PFE3 Gm15612-201ENSMUST00000147542 3118 ntTSL 2 BASIC10.41□□□□□ -0.74
Rad54bQ6PFE3 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rad54bQ6PFE3 Duoxa1-203ENSMUST00000110538 2467 ntTSL 5 BASIC10.41□□□□□ -0.74
Rad54bQ6PFE3 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Rad54bQ6PFE3 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rad54bQ6PFE3 Atp1a3-202ENSMUST00000102858 3895 ntTSL 2 BASIC10.41□□□□□ -0.74
Rad54bQ6PFE3 Gm11919-201ENSMUST00000117609 721 ntBASIC10.41□□□□□ -0.74
Rad54bQ6PFE3 Gm11801-201ENSMUST00000117807 746 ntBASIC10.41□□□□□ -0.74
Rad54bQ6PFE3 Gm12179-201ENSMUST00000118344 1272 ntBASIC10.41□□□□□ -0.74
Rad54bQ6PFE3 Gm12899-201ENSMUST00000120565 551 ntBASIC10.41□□□□□ -0.74
Rad54bQ6PFE3 Gm12030-201ENSMUST00000121917 223 ntBASIC10.41□□□□□ -0.74
Rad54bQ6PFE3 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC10.41□□□□□ -0.74
Rad54bQ6PFE3 1810058I24Rik-201ENSMUST00000130875 690 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Rad54bQ6PFE3 Mir1956-201ENSMUST00000157748 65 ntBASIC10.41□□□□□ -0.74
Rad54bQ6PFE3 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Rad54bQ6PFE3 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC10.41□□□□□ -0.74
Rad54bQ6PFE3 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rad54bQ6PFE3 Gm28857-201ENSMUST00000188068 425 ntTSL 3 BASIC10.41□□□□□ -0.74
Rad54bQ6PFE3 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Rad54bQ6PFE3 Gm5100-201ENSMUST00000195631 589 ntBASIC10.41□□□□□ -0.74
Rad54bQ6PFE3 Adh6-ps1-202ENSMUST00000196293 754 ntBASIC10.41□□□□□ -0.74
Rad54bQ6PFE3 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC10.41□□□□□ -0.74
Rad54bQ6PFE3 Gm7904-201ENSMUST00000217049 465 ntBASIC10.41□□□□□ -0.74
Rad54bQ6PFE3 1700047G03Rik-205ENSMUST00000227822 1048 ntBASIC10.41□□□□□ -0.74
Rad54bQ6PFE3 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC10.41□□□□□ -0.74
Rad54bQ6PFE3 Tbata-202ENSMUST00000079235 696 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Rad54bQ6PFE3 Mirlet7i-201ENSMUST00000083472 85 ntBASIC10.41□□□□□ -0.74
Rad54bQ6PFE3 Cfap100-201ENSMUST00000062750 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rad54bQ6PFE3 Gm35715-201ENSMUST00000197421 2054 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Rad54bQ6PFE3 4930503B20Rik-201ENSMUST00000049703 2080 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rad54bQ6PFE3 5730455P16Rik-204ENSMUST00000179332 4536 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Rad54bQ6PFE3 Dctn1-202ENSMUST00000113907 4205 ntTSL 5 BASIC10.41□□□□□ -0.74
Rad54bQ6PFE3 Smarca5-ps-201ENSMUST00000121843 3123 ntBASIC10.41□□□□□ -0.74
Rad54bQ6PFE3 AC121574.1-201ENSMUST00000228770 3132 ntBASIC10.41□□□□□ -0.74
Rad54bQ6PFE3 Adamtsl2-201ENSMUST00000091233 3612 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rad54bQ6PFE3 Gm43817-201ENSMUST00000196459 2262 ntBASIC10.41□□□□□ -0.74
Rad54bQ6PFE3 1700110I01Rik-202ENSMUST00000112812 1737 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Rad54bQ6PFE3 Stau1-202ENSMUST00000109235 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rad54bQ6PFE3 Gm11100-201ENSMUST00000112652 1951 ntTSL 5 BASIC10.41□□□□□ -0.74
Rad54bQ6PFE3 A630012P03Rik-202ENSMUST00000114854 1974 ntTSL 5 BASIC10.41□□□□□ -0.74
Rad54bQ6PFE3 Gm20735-201ENSMUST00000212077 1979 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Rad54bQ6PFE3 Strip2-202ENSMUST00000115224 3524 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Rad54bQ6PFE3 Rnf43-202ENSMUST00000092800 4037 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Rad54bQ6PFE3 Gm6783-201ENSMUST00000120916 1437 ntBASIC10.41□□□□□ -0.74
Rad54bQ6PFE3 Mak16-201ENSMUST00000033983 1902 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rad54bQ6PFE3 Polr3b-201ENSMUST00000077175 4975 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rad54bQ6PFE3 Gm26614-201ENSMUST00000180386 3909 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Rad54bQ6PFE3 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Rad54bQ6PFE3 Colq-205ENSMUST00000150054 2867 ntTSL 5 BASIC10.4□□□□□ -0.74
Rad54bQ6PFE3 Gm37608-201ENSMUST00000195696 1880 ntBASIC10.4□□□□□ -0.74
Rad54bQ6PFE3 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rad54bQ6PFE3 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Rad54bQ6PFE3 Gfap-202ENSMUST00000077902 2600 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Rad54bQ6PFE3 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Rad54bQ6PFE3 Zfp141-203ENSMUST00000174407 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rad54bQ6PFE3 Mgat4a-202ENSMUST00000143636 1802 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Rad54bQ6PFE3 Arxes1-201ENSMUST00000057625 1580 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Rad54bQ6PFE3 Gpr149-201ENSMUST00000058535 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rad54bQ6PFE3 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC10.4□□□□□ -0.74
Rad54bQ6PFE3 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rad54bQ6PFE3 Myc-204ENSMUST00000160009 1765 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Rad54bQ6PFE3 Lrrc28-202ENSMUST00000053950 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rad54bQ6PFE3 Gm14164-202ENSMUST00000128577 1999 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Rad54bQ6PFE3 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC10.4□□□□□ -0.74
Rad54bQ6PFE3 1700011M02Rik-201ENSMUST00000113602 420 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rad54bQ6PFE3 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC10.4□□□□□ -0.74
Rad54bQ6PFE3 Rbm48-202ENSMUST00000121877 617 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rad54bQ6PFE3 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC10.4□□□□□ -0.74
Rad54bQ6PFE3 Gm16234-201ENSMUST00000124976 815 ntTSL 5 BASIC10.4□□□□□ -0.74
Rad54bQ6PFE3 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC10.4□□□□□ -0.74
Rad54bQ6PFE3 Gm12737-201ENSMUST00000142835 725 ntTSL 5 BASIC10.4□□□□□ -0.74
Rad54bQ6PFE3 Gm4778-202ENSMUST00000159517 1241 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Rad54bQ6PFE3 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC10.4□□□□□ -0.74
Rad54bQ6PFE3 Tnnt1-206ENSMUST00000163710 885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rad54bQ6PFE3 Gm29200-201ENSMUST00000188118 1085 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Rad54bQ6PFE3 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC10.4□□□□□ -0.74
Rad54bQ6PFE3 Gm37232-201ENSMUST00000194887 367 ntBASIC10.4□□□□□ -0.74
Rad54bQ6PFE3 Gm5311-201ENSMUST00000203518 709 ntBASIC10.4□□□□□ -0.74
Rad54bQ6PFE3 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC10.4□□□□□ -0.74
Rad54bQ6PFE3 Fcer2a-205ENSMUST00000208145 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rad54bQ6PFE3 Gm45770-201ENSMUST00000212105 616 ntBASIC10.4□□□□□ -0.74
Rad54bQ6PFE3 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rad54bQ6PFE3 Gm6960-201ENSMUST00000051629 639 ntBASIC10.4□□□□□ -0.74
Rad54bQ6PFE3 Nutf2-ps1-201ENSMUST00000095978 864 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Rad54bQ6PFE3 AC158777.1-201ENSMUST00000226216 1724 ntBASIC10.4□□□□□ -0.74
Rad54bQ6PFE3 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Rad54bQ6PFE3 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Rad54bQ6PFE3 Gm28988-201ENSMUST00000191363 1897 ntTSL 5 BASIC10.4□□□□□ -0.75
Rad54bQ6PFE3 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.75
Rad54bQ6PFE3 Adra1a-202ENSMUST00000159068 4282 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.75
Rad54bQ6PFE3 Gm15894-201ENSMUST00000162828 2067 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Rad54bQ6PFE3 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Rad54bQ6PFE3 Tmem87a-201ENSMUST00000090042 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Rad54bQ6PFE3 Ano1-202ENSMUST00000118556 4566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Rad54bQ6PFE3 Foxm1-202ENSMUST00000112148 2229 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Rad54bQ6PFE3 Gm44975-201ENSMUST00000207435 1390 ntBASIC10.39□□□□□ -0.75
Rad54bQ6PFE3 Dlgap4-206ENSMUST00000109568 3256 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms