Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Vps54Q5SPW0 Phf8-203ENSMUST00000112662 3732 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
Vps54Q5SPW0 Thbd-201ENSMUST00000099270 3723 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Vps54Q5SPW0 Gm31763-202ENSMUST00000218205 1724 ntBASIC12.42□□□□□ -0.42
Vps54Q5SPW0 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps54Q5SPW0 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps54Q5SPW0 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vps54Q5SPW0 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps54Q5SPW0 Anxa11os-201ENSMUST00000184083 2479 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vps54Q5SPW0 Mfsd2b-201ENSMUST00000045921 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps54Q5SPW0 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Vps54Q5SPW0 Gm17644-201ENSMUST00000181272 3200 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Vps54Q5SPW0 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps54Q5SPW0 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Vps54Q5SPW0 Pcdha4-201ENSMUST00000192295 4129 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Vps54Q5SPW0 Gm43372-201ENSMUST00000202662 3016 ntBASIC12.41□□□□□ -0.42
Vps54Q5SPW0 Ttll2-201ENSMUST00000115747 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps54Q5SPW0 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps54Q5SPW0 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC12.41□□□□□ -0.42
Vps54Q5SPW0 Mitf-201ENSMUST00000043628 1921 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Vps54Q5SPW0 Micalcl-202ENSMUST00000051308 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps54Q5SPW0 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Vps54Q5SPW0 D030055H07Rik-202ENSMUST00000150953 4325 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Vps54Q5SPW0 Cln3-204ENSMUST00000116269 2487 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Vps54Q5SPW0 H2afb3-201ENSMUST00000122050 348 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Vps54Q5SPW0 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
Vps54Q5SPW0 Gm14798-201ENSMUST00000139695 1189 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Vps54Q5SPW0 Adra1a-205ENSMUST00000161339 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps54Q5SPW0 Tex33-202ENSMUST00000165170 1072 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps54Q5SPW0 Gm22994-201ENSMUST00000175422 82 ntBASIC12.41□□□□□ -0.42
Vps54Q5SPW0 Igkv4-54-201ENSMUST00000177697 288 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Vps54Q5SPW0 Cpsf4l-201ENSMUST00000018871 1235 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Vps54Q5SPW0 Gm38191-201ENSMUST00000194509 770 ntTSL 5 BASIC12.41□□□□□ -0.42
Vps54Q5SPW0 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Vps54Q5SPW0 Ndufa4-205ENSMUST00000204978 610 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps54Q5SPW0 Gm9644-201ENSMUST00000212828 1183 ntBASIC12.41□□□□□ -0.42
Vps54Q5SPW0 Gm19640-201ENSMUST00000214849 464 ntBASIC12.41□□□□□ -0.42
Vps54Q5SPW0 Gm18119-201ENSMUST00000219972 616 ntBASIC12.41□□□□□ -0.42
Vps54Q5SPW0 Gm26861-207ENSMUST00000223253 1095 ntTSL 5 BASIC12.41□□□□□ -0.42
Vps54Q5SPW0 CT025689.5-201ENSMUST00000224316 986 ntBASIC12.41□□□□□ -0.42
Vps54Q5SPW0 AC154683.1-201ENSMUST00000228409 1284 ntBASIC12.41□□□□□ -0.42
Vps54Q5SPW0 Ssna1-201ENSMUST00000028342 862 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps54Q5SPW0 Eif3m-201ENSMUST00000028592 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps54Q5SPW0 Atp5j2-201ENSMUST00000037056 540 ntTSL 5 BASIC12.41□□□□□ -0.42
Vps54Q5SPW0 Nrf1-201ENSMUST00000004761 1589 ntTSL 5 BASIC12.41□□□□□ -0.42
Vps54Q5SPW0 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
Vps54Q5SPW0 Tex33-201ENSMUST00000074380 1147 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps54Q5SPW0 Rps8-ps4-201ENSMUST00000092523 612 ntBASIC12.41□□□□□ -0.42
Vps54Q5SPW0 Krtap3-2-201ENSMUST00000092699 1031 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Vps54Q5SPW0 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps54Q5SPW0 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Vps54Q5SPW0 Tmem87a-201ENSMUST00000090042 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps54Q5SPW0 Zfp418-201ENSMUST00000051435 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps54Q5SPW0 4833420G17Rik-201ENSMUST00000026519 2565 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps54Q5SPW0 Fyn-205ENSMUST00000135242 2114 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Vps54Q5SPW0 Tor4a-201ENSMUST00000081869 3255 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps54Q5SPW0 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps54Q5SPW0 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Vps54Q5SPW0 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps54Q5SPW0 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps54Q5SPW0 Cfap43-202ENSMUST00000095998 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps54Q5SPW0 Lrfn5-202ENSMUST00000119481 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps54Q5SPW0 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC12.41□□□□□ -0.42
Vps54Q5SPW0 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps54Q5SPW0 Fam13c-203ENSMUST00000173042 3310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vps54Q5SPW0 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Vps54Q5SPW0 Tex11-202ENSMUST00000113716 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vps54Q5SPW0 Plpbp-203ENSMUST00000209525 5767 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Vps54Q5SPW0 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vps54Q5SPW0 Atl2-201ENSMUST00000068282 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vps54Q5SPW0 Alas1-202ENSMUST00000112524 3089 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vps54Q5SPW0 Fkbp6-201ENSMUST00000044972 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vps54Q5SPW0 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC12.4□□□□□ -0.42
Vps54Q5SPW0 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vps54Q5SPW0 Lrrc49-204ENSMUST00000114034 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vps54Q5SPW0 AC164092.1-201ENSMUST00000215635 2232 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Vps54Q5SPW0 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vps54Q5SPW0 Hist1h4i-201ENSMUST00000102977 727 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Vps54Q5SPW0 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Vps54Q5SPW0 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Vps54Q5SPW0 Gm12948-201ENSMUST00000119406 682 ntBASIC12.4□□□□□ -0.42
Vps54Q5SPW0 Gm12009-201ENSMUST00000121361 1100 ntBASIC12.4□□□□□ -0.42
Vps54Q5SPW0 4930538E20Rik-201ENSMUST00000131383 546 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Vps54Q5SPW0 Gm15540-201ENSMUST00000136052 674 ntTSL 2 BASIC12.4□□□□□ -0.42
Vps54Q5SPW0 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
Vps54Q5SPW0 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
Vps54Q5SPW0 Atp5e-201ENSMUST00000016396 421 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vps54Q5SPW0 4930471C04Rik-201ENSMUST00000166038 865 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Vps54Q5SPW0 Rab11a-204ENSMUST00000167569 726 ntTSL 3 BASIC12.4□□□□□ -0.42
Vps54Q5SPW0 Gm7069-201ENSMUST00000182418 1008 ntBASIC12.4□□□□□ -0.42
Vps54Q5SPW0 Gm27241-201ENSMUST00000183517 622 ntTSL 3 BASIC12.4□□□□□ -0.42
Vps54Q5SPW0 Gm7902-201ENSMUST00000198842 947 ntBASIC12.4□□□□□ -0.42
Vps54Q5SPW0 Trav11n-201ENSMUST00000200113 343 ntBASIC12.4□□□□□ -0.42
Vps54Q5SPW0 Gm44709-201ENSMUST00000207649 448 ntTSL 5 BASIC12.4□□□□□ -0.42
Vps54Q5SPW0 3930402G23Rik-202ENSMUST00000208615 581 ntTSL 3 BASIC12.4□□□□□ -0.42
Vps54Q5SPW0 AC100406.1-201ENSMUST00000217305 480 ntBASIC12.4□□□□□ -0.42
Vps54Q5SPW0 AC133496.1-201ENSMUST00000223891 743 ntBASIC12.4□□□□□ -0.42
Vps54Q5SPW0 AC165092.1-201ENSMUST00000224018 486 ntBASIC12.4□□□□□ -0.42
Vps54Q5SPW0 AC154759.1-201ENSMUST00000224137 1159 ntBASIC12.4□□□□□ -0.42
Vps54Q5SPW0 AC134913.2-201ENSMUST00000225017 771 ntBASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms