Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rc3h1Q4VGL6 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rc3h1Q4VGL6 Cckar-202ENSMUST00000200691 3230 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rc3h1Q4VGL6 Gm38262-201ENSMUST00000194760 1382 ntBASIC12.13□□□□□ -0.47
Rc3h1Q4VGL6 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rc3h1Q4VGL6 Atp5s-201ENSMUST00000021372 1485 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rc3h1Q4VGL6 Uaca-201ENSMUST00000050183 4428 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rc3h1Q4VGL6 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rc3h1Q4VGL6 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC12.12□□□□□ -0.47
Rc3h1Q4VGL6 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rc3h1Q4VGL6 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC12.12□□□□□ -0.47
Rc3h1Q4VGL6 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rc3h1Q4VGL6 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rc3h1Q4VGL6 Aplp2-202ENSMUST00000079758 3504 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rc3h1Q4VGL6 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rc3h1Q4VGL6 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Rc3h1Q4VGL6 Gm7052-201ENSMUST00000167568 1512 ntBASIC12.12□□□□□ -0.47
Rc3h1Q4VGL6 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rc3h1Q4VGL6 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Rc3h1Q4VGL6 Trp63-207ENSMUST00000115308 2380 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rc3h1Q4VGL6 Qrfpr-201ENSMUST00000091227 1839 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rc3h1Q4VGL6 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC12.12□□□□□ -0.47
Rc3h1Q4VGL6 Zbp1-202ENSMUST00000109116 770 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rc3h1Q4VGL6 Gm14176-201ENSMUST00000121302 477 ntBASIC12.12□□□□□ -0.47
Rc3h1Q4VGL6 Gm11491-201ENSMUST00000129441 1118 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rc3h1Q4VGL6 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rc3h1Q4VGL6 Gm8988-201ENSMUST00000155015 1240 ntBASIC12.12□□□□□ -0.47
Rc3h1Q4VGL6 Gm16112-201ENSMUST00000159075 382 ntBASIC12.12□□□□□ -0.47
Rc3h1Q4VGL6 Gm5277-201ENSMUST00000164923 556 ntBASIC12.12□□□□□ -0.47
Rc3h1Q4VGL6 Gm26725-201ENSMUST00000180652 1113 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rc3h1Q4VGL6 1500015A07Rik-202ENSMUST00000184530 423 ntTSL 3 BASIC12.12□□□□□ -0.47
Rc3h1Q4VGL6 Gm37232-201ENSMUST00000194887 367 ntBASIC12.12□□□□□ -0.47
Rc3h1Q4VGL6 Mt1-203ENSMUST00000212291 633 ntTSL 2 BASIC12.12□□□□□ -0.47
Rc3h1Q4VGL6 AC154838.2-201ENSMUST00000226602 747 ntBASIC12.12□□□□□ -0.47
Rc3h1Q4VGL6 Gm8615-201ENSMUST00000025307 771 ntBASIC12.12□□□□□ -0.47
Rc3h1Q4VGL6 Gm5424-201ENSMUST00000053865 1240 ntBASIC12.12□□□□□ -0.47
Rc3h1Q4VGL6 Rpl9-201ENSMUST00000057885 738 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rc3h1Q4VGL6 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
Rc3h1Q4VGL6 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rc3h1Q4VGL6 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rc3h1Q4VGL6 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rc3h1Q4VGL6 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rc3h1Q4VGL6 Pbld1-201ENSMUST00000020266 2407 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
Rc3h1Q4VGL6 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rc3h1Q4VGL6 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rc3h1Q4VGL6 Angptl2-201ENSMUST00000004208 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rc3h1Q4VGL6 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Rc3h1Q4VGL6 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rc3h1Q4VGL6 Metap1-203ENSMUST00000197531 3708 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rc3h1Q4VGL6 Acadsb-202ENSMUST00000117518 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rc3h1Q4VGL6 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Rc3h1Q4VGL6 AC166361.2-201ENSMUST00000219269 1415 ntBASIC12.11□□□□□ -0.47
Rc3h1Q4VGL6 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rc3h1Q4VGL6 Rps24-210ENSMUST00000225023 1613 ntAPPRIS P4 BASIC12.11□□□□□ -0.47
Rc3h1Q4VGL6 Eif2ak4-203ENSMUST00000110869 1715 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rc3h1Q4VGL6 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rc3h1Q4VGL6 Btn2a2-204ENSMUST00000223877 2109 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Rc3h1Q4VGL6 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rc3h1Q4VGL6 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rc3h1Q4VGL6 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rc3h1Q4VGL6 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rc3h1Q4VGL6 Dcaf12l1-201ENSMUST00000060481 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rc3h1Q4VGL6 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rc3h1Q4VGL6 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Rc3h1Q4VGL6 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rc3h1Q4VGL6 Lep-201ENSMUST00000069789 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rc3h1Q4VGL6 Slc39a14-210ENSMUST00000152067 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rc3h1Q4VGL6 Chrm5-201ENSMUST00000099589 1599 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Rc3h1Q4VGL6 Pfkfb3-215ENSMUST00000183869 1478 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rc3h1Q4VGL6 Amd-ps3-201ENSMUST00000072796 1496 ntBASIC12.11□□□□□ -0.47
Rc3h1Q4VGL6 Gm6755-201ENSMUST00000100598 864 ntBASIC12.11□□□□□ -0.47
Rc3h1Q4VGL6 Gm6740-201ENSMUST00000100617 864 ntBASIC12.11□□□□□ -0.47
Rc3h1Q4VGL6 Ighv1-74-201ENSMUST00000103543 348 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Rc3h1Q4VGL6 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Rc3h1Q4VGL6 Klrc2-202ENSMUST00000112057 1149 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rc3h1Q4VGL6 Mkrn2os-202ENSMUST00000112957 964 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Rc3h1Q4VGL6 Gm11652-201ENSMUST00000117842 1267 ntBASIC12.11□□□□□ -0.47
Rc3h1Q4VGL6 Tm6sf1-202ENSMUST00000119543 1066 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rc3h1Q4VGL6 Gm9166-201ENSMUST00000120293 561 ntBASIC12.11□□□□□ -0.47
Rc3h1Q4VGL6 Gm15793-201ENSMUST00000121857 495 ntBASIC12.11□□□□□ -0.47
Rc3h1Q4VGL6 Gm16069-201ENSMUST00000131146 545 ntTSL 3 BASIC12.11□□□□□ -0.47
Rc3h1Q4VGL6 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Rc3h1Q4VGL6 Gm12326-201ENSMUST00000132986 618 ntTSL 5 BASIC12.11□□□□□ -0.47
Rc3h1Q4VGL6 Gm14232-201ENSMUST00000137176 446 ntTSL 3 BASIC12.11□□□□□ -0.47
Rc3h1Q4VGL6 St8sia3os-204ENSMUST00000140903 383 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rc3h1Q4VGL6 Gm12737-201ENSMUST00000142835 725 ntTSL 5 BASIC12.11□□□□□ -0.47
Rc3h1Q4VGL6 Gm16227-201ENSMUST00000160088 563 ntTSL 3 BASIC12.11□□□□□ -0.47
Rc3h1Q4VGL6 Rab11a-204ENSMUST00000167569 726 ntTSL 3 BASIC12.11□□□□□ -0.47
Rc3h1Q4VGL6 Tex33-203ENSMUST00000169575 942 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Rc3h1Q4VGL6 Gm22994-201ENSMUST00000175422 82 ntBASIC12.11□□□□□ -0.47
Rc3h1Q4VGL6 Gm21139-201ENSMUST00000186594 877 ntBASIC12.11□□□□□ -0.47
Rc3h1Q4VGL6 4930517L18Rik-201ENSMUST00000191880 482 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rc3h1Q4VGL6 Gm37858-201ENSMUST00000192759 1231 ntBASIC12.11□□□□□ -0.47
Rc3h1Q4VGL6 Gm36307-201ENSMUST00000195831 953 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rc3h1Q4VGL6 Gm36028-202ENSMUST00000205931 1161 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Rc3h1Q4VGL6 AC154595.1-201ENSMUST00000225533 1059 ntBASIC12.11□□□□□ -0.47
Rc3h1Q4VGL6 AC105408.1-201ENSMUST00000227771 802 ntBASIC12.11□□□□□ -0.47
Rc3h1Q4VGL6 Nmb-201ENSMUST00000026817 705 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rc3h1Q4VGL6 Ssna1-201ENSMUST00000028342 862 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rc3h1Q4VGL6 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 92.2 ms