Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Gm38413-202ENSMUST00000198449 2348 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Trim63Q38HM4 Creb5-201ENSMUST00000047450 2330 ntAPPRIS P2 TSL 5 BASIC8.46□□□□□ -1.05
Trim63Q38HM4 Gm37522-201ENSMUST00000195437 2884 ntBASIC8.46□□□□□ -1.05
Trim63Q38HM4 Trpc4-205ENSMUST00000200048 3170 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.05
Trim63Q38HM4 Frmpd4-202ENSMUST00000112146 8153 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.05
Trim63Q38HM4 Mboat2-202ENSMUST00000110942 2351 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.06
Trim63Q38HM4 Atxn1-202ENSMUST00000167708 3751 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.06
Trim63Q38HM4 Katnb1-201ENSMUST00000034239 3777 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Trim63Q38HM4 Amph-204ENSMUST00000200466 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Trim63Q38HM4 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Trim63Q38HM4 Sfxn5-204ENSMUST00000113788 514 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Trim63Q38HM4 Gm14539-201ENSMUST00000117527 174 ntBASIC8.46□□□□□ -1.06
Trim63Q38HM4 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Trim63Q38HM4 Gm13740-201ENSMUST00000120590 310 ntBASIC8.46□□□□□ -1.06
Trim63Q38HM4 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Trim63Q38HM4 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC8.46□□□□□ -1.06
Trim63Q38HM4 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Trim63Q38HM4 Tbata-210ENSMUST00000151886 915 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Trim63Q38HM4 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Trim63Q38HM4 Esd-ps-201ENSMUST00000170684 847 ntBASIC8.46□□□□□ -1.06
Trim63Q38HM4 Gm42627-201ENSMUST00000197347 224 ntBASIC8.46□□□□□ -1.06
Trim63Q38HM4 Gm5950-201ENSMUST00000213337 772 ntBASIC8.46□□□□□ -1.06
Trim63Q38HM4 Gm7940-201ENSMUST00000218195 769 ntBASIC8.46□□□□□ -1.06
Trim63Q38HM4 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC8.46□□□□□ -1.06
Trim63Q38HM4 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC8.46□□□□□ -1.06
Trim63Q38HM4 AC155237.1-201ENSMUST00000226196 1279 ntBASIC8.46□□□□□ -1.06
Trim63Q38HM4 Wdyhv1-203ENSMUST00000226889 394 ntBASIC8.46□□□□□ -1.06
Trim63Q38HM4 Sla2-201ENSMUST00000029164 2973 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Trim63Q38HM4 Man2b1-201ENSMUST00000034121 3822 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Trim63Q38HM4 Gm15823-201ENSMUST00000064305 670 ntBASIC8.46□□□□□ -1.06
Trim63Q38HM4 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC8.46□□□□□ -1.06
Trim63Q38HM4 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.06
Trim63Q38HM4 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
Trim63Q38HM4 Adtrp-201ENSMUST00000072012 2440 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.06
Trim63Q38HM4 Lrtm2-202ENSMUST00000112756 3569 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Trim63Q38HM4 Trim17-202ENSMUST00000075141 3028 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Trim63Q38HM4 Mfap3l-201ENSMUST00000034066 1896 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Trim63Q38HM4 Pitrm1-201ENSMUST00000021611 3318 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Trim63Q38HM4 Arhgap25-203ENSMUST00000113637 3671 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Trim63Q38HM4 Gm9115-201ENSMUST00000120192 1348 ntBASIC8.46□□□□□ -1.06
Trim63Q38HM4 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC8.46□□□□□ -1.06
Trim63Q38HM4 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Trim63Q38HM4 Gm43579-201ENSMUST00000202387 1307 ntBASIC8.46□□□□□ -1.06
Trim63Q38HM4 Cndp1-201ENSMUST00000070139 2818 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Trim63Q38HM4 U2surp-209ENSMUST00000217176 3111 ntTSL 5 BASIC8.46□□□□□ -1.06
Trim63Q38HM4 Zeb2-215ENSMUST00000200844 4064 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.06
Trim63Q38HM4 Dync1i2-207ENSMUST00000112142 2585 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Trim63Q38HM4 Olfr521-202ENSMUST00000219663 2277 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
Trim63Q38HM4 Olfr521-203ENSMUST00000220001 2254 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
Trim63Q38HM4 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Trim63Q38HM4 Trim43a-201ENSMUST00000164661 1981 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Trim63Q38HM4 Olfr1189-202ENSMUST00000213679 1983 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
Trim63Q38HM4 Gpkow-201ENSMUST00000049896 3579 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Trim63Q38HM4 Cdc5l-201ENSMUST00000024727 2989 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Trim63Q38HM4 Gm5910-201ENSMUST00000211819 1746 ntBASIC8.46□□□□□ -1.06
Trim63Q38HM4 Myof-202ENSMUST00000172095 7094 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.06
Trim63Q38HM4 Ldb2-205ENSMUST00000199261 2367 ntAPPRIS ALT1 TSL 5 BASIC8.46□□□□□ -1.06
Trim63Q38HM4 AC155929.3-201ENSMUST00000217963 1428 ntTSL 5 BASIC8.46□□□□□ -1.06
Trim63Q38HM4 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.06
Trim63Q38HM4 Retsat-201ENSMUST00000070597 3027 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Trim63Q38HM4 Rufy3-202ENSMUST00000196686 2077 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Trim63Q38HM4 Gprc5c-202ENSMUST00000053361 3667 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trim63Q38HM4 Abcb1a-201ENSMUST00000047753 4997 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trim63Q38HM4 Gm15708-201ENSMUST00000156467 1765 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Trim63Q38HM4 Zc3h10-201ENSMUST00000040572 3721 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trim63Q38HM4 Gng7-202ENSMUST00000099462 3425 ntAPPRIS P2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trim63Q38HM4 Olfr173-202ENSMUST00000206205 2778 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
Trim63Q38HM4 Elp3-203ENSMUST00000225355 2771 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Trim63Q38HM4 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC8.45□□□□□ -1.06
Trim63Q38HM4 Jarid2-210ENSMUST00000173704 4135 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trim63Q38HM4 Slc2a9-205ENSMUST00000129099 3462 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
Trim63Q38HM4 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trim63Q38HM4 Hypk-202ENSMUST00000110612 4170 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Trim63Q38HM4 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
Trim63Q38HM4 Gabrb2-205ENSMUST00000192403 1539 ntAPPRIS ALT1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trim63Q38HM4 AC110091.2-201ENSMUST00000215107 1512 ntTSL 5 BASIC8.45□□□□□ -1.06
Trim63Q38HM4 Grk1-202ENSMUST00000209909 7431 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Trim63Q38HM4 Grk1-201ENSMUST00000033827 7425 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trim63Q38HM4 Wdr77-201ENSMUST00000010278 3682 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trim63Q38HM4 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trim63Q38HM4 Nek10-202ENSMUST00000112630 3348 ntAPPRIS P2 TSL 5 BASIC8.45□□□□□ -1.06
Trim63Q38HM4 Fto-203ENSMUST00000128081 4707 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Trim63Q38HM4 Zdhhc9-201ENSMUST00000037960 2982 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trim63Q38HM4 Gria3-201ENSMUST00000076349 5192 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trim63Q38HM4 Pcdh15-241ENSMUST00000195531 5241 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
Trim63Q38HM4 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trim63Q38HM4 Asgr1-203ENSMUST00000108585 1169 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
Trim63Q38HM4 Smgc-204ENSMUST00000109277 855 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trim63Q38HM4 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trim63Q38HM4 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC8.45□□□□□ -1.06
Trim63Q38HM4 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC8.45□□□□□ -1.06
Trim63Q38HM4 Gm11989-201ENSMUST00000117240 672 ntBASIC8.45□□□□□ -1.06
Trim63Q38HM4 Gm9266-201ENSMUST00000117401 484 ntBASIC8.45□□□□□ -1.06
Trim63Q38HM4 Gm11362-201ENSMUST00000118838 850 ntBASIC8.45□□□□□ -1.06
Trim63Q38HM4 Gm15081-201ENSMUST00000119794 844 ntBASIC8.45□□□□□ -1.06
Trim63Q38HM4 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trim63Q38HM4 Uspl1-206ENSMUST00000122160 3827 ntAPPRIS P4 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trim63Q38HM4 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC8.45□□□□□ -1.06
Trim63Q38HM4 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trim63Q38HM4 Fxyd5-207ENSMUST00000161684 1172 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms