Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Gm12345-201ENSMUST00000119288 898 ntBASIC8.37□□□□□ -1.07
Lmo4P61969 Gm12736-201ENSMUST00000119330 236 ntBASIC8.37□□□□□ -1.07
Lmo4P61969 Gm13624-201ENSMUST00000120263 462 ntBASIC8.37□□□□□ -1.07
Lmo4P61969 Bola3-203ENSMUST00000122216 554 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Lmo4P61969 Gm16234-201ENSMUST00000124976 815 ntTSL 5 BASIC8.37□□□□□ -1.07
Lmo4P61969 Gm12977-201ENSMUST00000133742 942 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Lmo4P61969 Gm15419-201ENSMUST00000148654 743 ntTSL 3 BASIC8.37□□□□□ -1.07
Lmo4P61969 Gm23432-201ENSMUST00000157181 131 ntBASIC8.37□□□□□ -1.07
Lmo4P61969 Tnnc1-202ENSMUST00000169169 721 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Lmo4P61969 Gm44460-201ENSMUST00000196179 129 ntBASIC8.37□□□□□ -1.07
Lmo4P61969 2010008C14Rik-201ENSMUST00000203956 593 ntBASIC8.37□□□□□ -1.07
Lmo4P61969 Gm44415-201ENSMUST00000204151 2112 ntBASIC8.37□□□□□ -1.07
Lmo4P61969 4933407I05Rik-202ENSMUST00000213467 420 ntTSL 2 BASIC8.37□□□□□ -1.07
Lmo4P61969 Gm6353-201ENSMUST00000223234 1051 ntBASIC8.37□□□□□ -1.07
Lmo4P61969 AC127583.1-201ENSMUST00000224351 540 ntBASIC8.37□□□□□ -1.07
Lmo4P61969 CT025547.1-201ENSMUST00000225127 578 ntBASIC8.37□□□□□ -1.07
Lmo4P61969 AC166061.1-201ENSMUST00000225163 1138 ntBASIC8.37□□□□□ -1.07
Lmo4P61969 AC102327.1-201ENSMUST00000226389 742 ntBASIC8.37□□□□□ -1.07
Lmo4P61969 Gm8256-202ENSMUST00000227964 828 ntBASIC8.37□□□□□ -1.07
Lmo4P61969 AC161581.1-201ENSMUST00000228696 318 ntBASIC8.37□□□□□ -1.07
Lmo4P61969 2210010C04Rik-201ENSMUST00000031931 2142 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Lmo4P61969 Gm10053-201ENSMUST00000073080 949 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Lmo4P61969 Msln-201ENSMUST00000075884 2114 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Lmo4P61969 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC8.37□□□□□ -1.07
Lmo4P61969 Zfp133-ps-201ENSMUST00000119058 1802 ntBASIC8.37□□□□□ -1.07
Lmo4P61969 Cfap100-201ENSMUST00000062750 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Lmo4P61969 Gm5878-201ENSMUST00000113802 4643 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Lmo4P61969 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC8.37□□□□□ -1.07
Lmo4P61969 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
Lmo4P61969 Pax6-207ENSMUST00000111087 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Lmo4P61969 Wdr95-207ENSMUST00000202902 2574 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Lmo4P61969 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Lmo4P61969 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Lmo4P61969 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Lmo4P61969 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Lmo4P61969 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Lmo4P61969 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Lmo4P61969 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Lmo4P61969 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC8.37□□□□□ -1.07
Lmo4P61969 Ampd3-206ENSMUST00000170374 3489 ntAPPRIS P2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Lmo4P61969 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Lmo4P61969 Gm43522-201ENSMUST00000196697 1922 ntBASIC8.37□□□□□ -1.07
Lmo4P61969 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Lmo4P61969 Gm16070-201ENSMUST00000127328 5210 ntTSL 2 BASIC8.36□□□□□ -1.07
Lmo4P61969 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Lmo4P61969 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Lmo4P61969 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Lmo4P61969 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Lmo4P61969 Uaca-202ENSMUST00000214354 4417 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
Lmo4P61969 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Lmo4P61969 Fam234a-202ENSMUST00000118487 2629 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Lmo4P61969 Gm44907-201ENSMUST00000207423 1633 ntBASIC8.36□□□□□ -1.07
Lmo4P61969 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Lmo4P61969 Tmprss7-201ENSMUST00000114562 2587 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Lmo4P61969 Zfp74-204ENSMUST00000108212 2060 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Lmo4P61969 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
Lmo4P61969 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC8.36□□□□□ -1.07
Lmo4P61969 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Lmo4P61969 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Lmo4P61969 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Lmo4P61969 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Lmo4P61969 BC051665-201ENSMUST00000026078 1348 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Lmo4P61969 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Lmo4P61969 Bloc1s5-201ENSMUST00000035899 5634 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Lmo4P61969 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Lmo4P61969 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Lmo4P61969 Ndn-201ENSMUST00000038775 3694 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Lmo4P61969 Slc17a3-203ENSMUST00000110422 1764 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
Lmo4P61969 AC116596.1-201ENSMUST00000228112 1762 ntBASIC8.36□□□□□ -1.07
Lmo4P61969 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Lmo4P61969 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Lmo4P61969 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
Lmo4P61969 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Lmo4P61969 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC8.36□□□□□ -1.07
Lmo4P61969 Ntm-202ENSMUST00000115236 1072 ntTSL 5 BASIC8.36□□□□□ -1.07
Lmo4P61969 Gm11947-201ENSMUST00000125275 273 ntTSL 3 BASIC8.36□□□□□ -1.07
Lmo4P61969 Gm13191-201ENSMUST00000136489 416 ntTSL 3 BASIC8.36□□□□□ -1.07
Lmo4P61969 Gm15587-202ENSMUST00000156403 709 ntTSL 5 BASIC8.36□□□□□ -1.07
Lmo4P61969 Actb-207ENSMUST00000167721 1242 ntTSL 5 BASIC8.36□□□□□ -1.07
Lmo4P61969 Tead1-211ENSMUST00000170352 1218 ntTSL 5 BASIC8.36□□□□□ -1.07
Lmo4P61969 Gm5627-201ENSMUST00000178539 931 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Lmo4P61969 D130017N08Rik-201ENSMUST00000180460 510 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Lmo4P61969 Gm26875-201ENSMUST00000181006 950 ntBASIC8.36□□□□□ -1.07
Lmo4P61969 Gm29617-201ENSMUST00000185730 610 ntBASIC8.36□□□□□ -1.07
Lmo4P61969 Gm5259-201ENSMUST00000191231 800 ntBASIC8.36□□□□□ -1.07
Lmo4P61969 Spin3-ps-201ENSMUST00000192825 770 ntBASIC8.36□□□□□ -1.07
Lmo4P61969 A930036I15Rik-201ENSMUST00000196018 1045 ntBASIC8.36□□□□□ -1.07
Lmo4P61969 Gm3945-201ENSMUST00000196637 683 ntBASIC8.36□□□□□ -1.07
Lmo4P61969 Gm40153-201ENSMUST00000197904 637 ntTSL 3 BASIC8.36□□□□□ -1.07
Lmo4P61969 Gm17815-201ENSMUST00000198305 895 ntBASIC8.36□□□□□ -1.07
Lmo4P61969 4930515G16Rik-201ENSMUST00000199440 1256 ntBASIC8.36□□□□□ -1.07
Lmo4P61969 Arhgef33-210ENSMUST00000225548 456 ntBASIC8.36□□□□□ -1.07
Lmo4P61969 AC102523.2-201ENSMUST00000227813 983 ntBASIC8.36□□□□□ -1.07
Lmo4P61969 Galp-201ENSMUST00000037553 650 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Lmo4P61969 Mcpt4-201ENSMUST00000043249 1108 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Lmo4P61969 Fthl17a-201ENSMUST00000048382 835 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Lmo4P61969 Kcng4-201ENSMUST00000061828 3806 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Lmo4P61969 Gm9869-201ENSMUST00000063858 375 ntTSL 5 BASIC8.36□□□□□ -1.07
Lmo4P61969 Esp6-201ENSMUST00000097324 658 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Lmo4P61969 Exoc7-201ENSMUST00000021147 3337 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms