Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Cux1P53564 Rasgef1a-203ENSMUST00000203804 2183 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cux1P53564 Exosc1-201ENSMUST00000075280 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cux1P53564 Nectin4-203ENSMUST00000111286 3201 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cux1P53564 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC15.74■□□□□ 0.11
Cux1P53564 Gm43340-201ENSMUST00000200448 1344 ntBASIC15.74■□□□□ 0.11
Cux1P53564 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cux1P53564 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC15.74■□□□□ 0.11
Cux1P53564 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cux1P53564 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
Cux1P53564 Acsm2-201ENSMUST00000084647 2051 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cux1P53564 Gm11686-201ENSMUST00000122397 333 ntBASIC15.73■□□□□ 0.11
Cux1P53564 Gm11513-201ENSMUST00000138855 751 ntTSL 5 BASIC15.73■□□□□ 0.11
Cux1P53564 Elof1-201ENSMUST00000013966 888 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cux1P53564 Gm24466-201ENSMUST00000179978 109 ntBASIC15.73■□□□□ 0.11
Cux1P53564 Gm42591-201ENSMUST00000197249 700 ntBASIC15.73■□□□□ 0.11
Cux1P53564 Gm32591-201ENSMUST00000203038 414 ntTSL 3 BASIC15.73■□□□□ 0.11
Cux1P53564 Gm44159-201ENSMUST00000204065 442 ntBASIC15.73■□□□□ 0.11
Cux1P53564 Gm29783-201ENSMUST00000219398 369 ntBASIC15.73■□□□□ 0.11
Cux1P53564 AC167019.2-201ENSMUST00000227335 845 ntBASIC15.73■□□□□ 0.11
Cux1P53564 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Cux1P53564 Elobl-202ENSMUST00000082339 300 ntBASIC15.73■□□□□ 0.11
Cux1P53564 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Cux1P53564 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Cux1P53564 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Cux1P53564 Il1f5-206ENSMUST00000168941 1722 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Cux1P53564 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cux1P53564 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cux1P53564 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cux1P53564 Tmx2-202ENSMUST00000111664 1926 ntTSL 3 BASIC15.73■□□□□ 0.11
Cux1P53564 Gm18616-201ENSMUST00000222898 1400 ntBASIC15.73■□□□□ 0.11
Cux1P53564 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Cux1P53564 Ufsp2-201ENSMUST00000034051 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cux1P53564 Dntt-202ENSMUST00000112200 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cux1P53564 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC15.73■□□□□ 0.11
Cux1P53564 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Cux1P53564 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cux1P53564 Nr2c1-201ENSMUST00000092213 2376 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Cux1P53564 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cux1P53564 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Cux1P53564 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Cux1P53564 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Cux1P53564 Gm12481-201ENSMUST00000102482 297 ntBASIC15.73■□□□□ 0.11
Cux1P53564 4933439K11Rik-202ENSMUST00000140307 941 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Cux1P53564 Gm26639-201ENSMUST00000181426 491 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Cux1P53564 Gm26812-202ENSMUST00000181776 599 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Cux1P53564 Gm26834-201ENSMUST00000181815 950 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Cux1P53564 Hbq1a-201ENSMUST00000020535 604 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cux1P53564 Gm3635-201ENSMUST00000212314 354 ntBASIC15.73■□□□□ 0.11
Cux1P53564 AC107711.1-201ENSMUST00000227258 1295 ntBASIC15.73■□□□□ 0.11
Cux1P53564 Tctex1d1-201ENSMUST00000030248 977 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cux1P53564 Npy-201ENSMUST00000031843 566 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cux1P53564 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cux1P53564 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC15.73■□□□□ 0.11
Cux1P53564 Mepe-201ENSMUST00000066207 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cux1P53564 Blnk-201ENSMUST00000054769 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cux1P53564 Rorb-202ENSMUST00000112828 2854 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Cux1P53564 Gm33858-201ENSMUST00000216918 1411 ntTSL 5 BASIC15.72■□□□□ 0.11
Cux1P53564 Arhgap10-203ENSMUST00000210922 2208 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Cux1P53564 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cux1P53564 Champ1-201ENSMUST00000051870 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cux1P53564 Gm19557-201ENSMUST00000182109 2765 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Cux1P53564 Gm45699-201ENSMUST00000212838 1576 ntTSL 2 BASIC15.72■□□□□ 0.11
Cux1P53564 Pilra-202ENSMUST00000110980 1371 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
Cux1P53564 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Cux1P53564 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC15.72■□□□□ 0.11
Cux1P53564 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cux1P53564 AC126459.1-201ENSMUST00000214791 2123 ntBASIC15.72■□□□□ 0.11
Cux1P53564 Gm15894-201ENSMUST00000162828 2067 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Cux1P53564 Drc3-203ENSMUST00000108722 1858 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Cux1P53564 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Cux1P53564 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cux1P53564 Gm11401-201ENSMUST00000117212 344 ntBASIC15.72■□□□□ 0.11
Cux1P53564 Gm12004-201ENSMUST00000117869 718 ntBASIC15.72■□□□□ 0.11
Cux1P53564 Gm12551-201ENSMUST00000122073 726 ntBASIC15.72■□□□□ 0.11
Cux1P53564 Gm28845-201ENSMUST00000144760 733 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Cux1P53564 1700092M07Rik-201ENSMUST00000163172 380 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cux1P53564 Olfr170-203ENSMUST00000218837 1008 ntAPPRIS P2 BASIC15.72■□□□□ 0.11
Cux1P53564 Gm6129-201ENSMUST00000220725 801 ntBASIC15.72■□□□□ 0.11
Cux1P53564 Olfr170-201ENSMUST00000078603 1008 ntAPPRIS ALT1 BASIC15.72■□□□□ 0.11
Cux1P53564 Gm4925-201ENSMUST00000092231 397 ntBASIC15.72■□□□□ 0.11
Cux1P53564 Zfp410-208ENSMUST00000222258 2329 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Cux1P53564 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cux1P53564 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cux1P53564 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Cux1P53564 Gm8446-201ENSMUST00000188834 2712 ntBASIC15.71■□□□□ 0.11
Cux1P53564 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cux1P53564 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cux1P53564 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cux1P53564 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cux1P53564 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cux1P53564 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cux1P53564 C330021F23Rik-202ENSMUST00000136592 1621 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cux1P53564 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cux1P53564 Gm8817-201ENSMUST00000126769 693 ntTSL 2 BASIC15.71■□□□□ 0.11
Cux1P53564 Gm25953-201ENSMUST00000175338 83 ntBASIC15.71■□□□□ 0.11
Cux1P53564 Ccdc190-202ENSMUST00000175731 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cux1P53564 Gm38301-201ENSMUST00000195573 543 ntBASIC15.71■□□□□ 0.11
Cux1P53564 Gm18623-201ENSMUST00000219860 953 ntBASIC15.71■□□□□ 0.11
Cux1P53564 Platr25-206ENSMUST00000222303 1171 ntTSL 5 BASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 484.5 ms