Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 4930578C19Rik-201ENSMUST00000044188 1896 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chmp2aQ9DB34 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chmp2aQ9DB34 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC10.85□□□□□ -0.67
Chmp2aQ9DB34 Synpo2l-203ENSMUST00000119483 3696 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Chmp2aQ9DB34 Gm44103-201ENSMUST00000204364 3662 ntBASIC10.85□□□□□ -0.67
Chmp2aQ9DB34 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chmp2aQ9DB34 Jarid2-208ENSMUST00000173246 5997 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chmp2aQ9DB34 Gm13120-201ENSMUST00000117343 1446 ntBASIC10.84□□□□□ -0.67
Chmp2aQ9DB34 Tnfaip8-212ENSMUST00000179937 2385 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Chmp2aQ9DB34 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Chmp2aQ9DB34 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Chmp2aQ9DB34 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chmp2aQ9DB34 Ap1m2-201ENSMUST00000003397 1706 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chmp2aQ9DB34 Daam1-201ENSMUST00000085299 5879 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chmp2aQ9DB34 Loxl3-202ENSMUST00000101257 3252 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Chmp2aQ9DB34 Helz-201ENSMUST00000075012 6218 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chmp2aQ9DB34 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chmp2aQ9DB34 Mcm3-201ENSMUST00000053266 3031 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chmp2aQ9DB34 D030028A08Rik-202ENSMUST00000131501 3542 ntTSL 2 BASIC10.84□□□□□ -0.67
Chmp2aQ9DB34 Unc119-202ENSMUST00000100755 933 ntTSL 2 BASIC10.84□□□□□ -0.67
Chmp2aQ9DB34 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chmp2aQ9DB34 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC10.84□□□□□ -0.67
Chmp2aQ9DB34 Ptpa-210ENSMUST00000136009 810 ntTSL 3 BASIC10.84□□□□□ -0.67
Chmp2aQ9DB34 Gm12052-201ENSMUST00000142151 933 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Chmp2aQ9DB34 H2al1e-201ENSMUST00000178979 494 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Chmp2aQ9DB34 Gm29543-201ENSMUST00000188138 967 ntBASIC10.84□□□□□ -0.67
Chmp2aQ9DB34 H2al1b-201ENSMUST00000189531 495 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Chmp2aQ9DB34 Gm37452-201ENSMUST00000194416 1160 ntBASIC10.84□□□□□ -0.67
Chmp2aQ9DB34 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Chmp2aQ9DB34 Gm45363-201ENSMUST00000210196 1294 ntBASIC10.84□□□□□ -0.67
Chmp2aQ9DB34 Gm45500-201ENSMUST00000211676 803 ntBASIC10.84□□□□□ -0.67
Chmp2aQ9DB34 Gm18001-201ENSMUST00000212023 688 ntBASIC10.84□□□□□ -0.67
Chmp2aQ9DB34 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC10.84□□□□□ -0.67
Chmp2aQ9DB34 Gm34983-202ENSMUST00000220432 494 ntTSL 3 BASIC10.84□□□□□ -0.67
Chmp2aQ9DB34 Gm32296-201ENSMUST00000220590 1057 ntTSL 3 BASIC10.84□□□□□ -0.67
Chmp2aQ9DB34 CAAA01139602.1-201ENSMUST00000222545 283 ntBASIC10.84□□□□□ -0.67
Chmp2aQ9DB34 AC101205.2-201ENSMUST00000226206 715 ntBASIC10.84□□□□□ -0.67
Chmp2aQ9DB34 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chmp2aQ9DB34 Ifne-201ENSMUST00000056014 664 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Chmp2aQ9DB34 Gm9791-201ENSMUST00000060997 447 ntBASIC10.84□□□□□ -0.67
Chmp2aQ9DB34 Gm5449-201ENSMUST00000081132 357 ntBASIC10.84□□□□□ -0.67
Chmp2aQ9DB34 Ccr6-202ENSMUST00000164411 1553 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chmp2aQ9DB34 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC10.84□□□□□ -0.67
Chmp2aQ9DB34 AL645745.1-201ENSMUST00000222202 5348 ntTSL 2 BASIC10.84□□□□□ -0.67
Chmp2aQ9DB34 Ttll9-201ENSMUST00000099197 1797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chmp2aQ9DB34 Hspa12a-201ENSMUST00000066285 5733 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chmp2aQ9DB34 AC154171.2-201ENSMUST00000225219 2652 ntBASIC10.84□□□□□ -0.67
Chmp2aQ9DB34 Gm19557-201ENSMUST00000182109 2765 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Chmp2aQ9DB34 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC10.84□□□□□ -0.67
Chmp2aQ9DB34 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chmp2aQ9DB34 Ptk2b-203ENSMUST00000111121 3365 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Chmp2aQ9DB34 Uroc1-201ENSMUST00000046128 3370 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chmp2aQ9DB34 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
Chmp2aQ9DB34 Olfr6-203ENSMUST00000213651 4457 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Chmp2aQ9DB34 Smarca1-202ENSMUST00000088973 4798 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chmp2aQ9DB34 Tnc-204ENSMUST00000107377 7100 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chmp2aQ9DB34 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chmp2aQ9DB34 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chmp2aQ9DB34 AC153506.1-201ENSMUST00000218768 2915 ntBASIC10.84□□□□□ -0.67
Chmp2aQ9DB34 Fcrl1-202ENSMUST00000163661 1649 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chmp2aQ9DB34 Theg-201ENSMUST00000020566 1444 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chmp2aQ9DB34 Spert-201ENSMUST00000035243 1430 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chmp2aQ9DB34 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC10.83□□□□□ -0.67
Chmp2aQ9DB34 Gm19327-201ENSMUST00000220651 3271 ntBASIC10.83□□□□□ -0.67
Chmp2aQ9DB34 Rasgrp4-213ENSMUST00000204845 3182 ntTSL 5 BASIC10.83□□□□□ -0.68
Chmp2aQ9DB34 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chmp2aQ9DB34 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC10.83□□□□□ -0.68
Chmp2aQ9DB34 Gm10031-201ENSMUST00000190422 2653 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Chmp2aQ9DB34 Atp10d-202ENSMUST00000126664 6052 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chmp2aQ9DB34 Plxnb3-201ENSMUST00000002079 6030 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Chmp2aQ9DB34 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Chmp2aQ9DB34 Rrm2b-201ENSMUST00000022901 4561 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chmp2aQ9DB34 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC10.83□□□□□ -0.68
Chmp2aQ9DB34 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Chmp2aQ9DB34 Htr3b-201ENSMUST00000008734 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chmp2aQ9DB34 4933422A05Rik-201ENSMUST00000213706 1356 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Chmp2aQ9DB34 Aen-203ENSMUST00000107425 4956 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chmp2aQ9DB34 Zfr-201ENSMUST00000122941 4850 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chmp2aQ9DB34 Rps6-201ENSMUST00000102814 878 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chmp2aQ9DB34 Psmb3-201ENSMUST00000103147 766 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chmp2aQ9DB34 Pxmp4-202ENSMUST00000109703 560 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Chmp2aQ9DB34 Gm12712-201ENSMUST00000120676 801 ntBASIC10.83□□□□□ -0.68
Chmp2aQ9DB34 Gm13688-201ENSMUST00000121557 608 ntBASIC10.83□□□□□ -0.68
Chmp2aQ9DB34 Gm5257-201ENSMUST00000121823 790 ntBASIC10.83□□□□□ -0.68
Chmp2aQ9DB34 Ttc39b-206ENSMUST00000148811 727 ntTSL 3 BASIC10.83□□□□□ -0.68
Chmp2aQ9DB34 Gm16235-202ENSMUST00000149562 206 ntTSL 3 BASIC10.83□□□□□ -0.68
Chmp2aQ9DB34 Dhx34-207ENSMUST00000163968 3801 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chmp2aQ9DB34 Tmem229b-ps-201ENSMUST00000168554 506 ntBASIC10.83□□□□□ -0.68
Chmp2aQ9DB34 Gast-201ENSMUST00000017309 460 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chmp2aQ9DB34 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chmp2aQ9DB34 Gm6686-201ENSMUST00000178455 258 ntBASIC10.83□□□□□ -0.68
Chmp2aQ9DB34 1700048F04Rik-201ENSMUST00000199057 1064 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Chmp2aQ9DB34 Gm43811-201ENSMUST00000202862 695 ntBASIC10.83□□□□□ -0.68
Chmp2aQ9DB34 Gm2448-201ENSMUST00000207080 559 ntBASIC10.83□□□□□ -0.68
Chmp2aQ9DB34 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC10.83□□□□□ -0.68
Chmp2aQ9DB34 Gm3791-201ENSMUST00000220790 768 ntBASIC10.83□□□□□ -0.68
Chmp2aQ9DB34 Gm5189-201ENSMUST00000221796 261 ntBASIC10.83□□□□□ -0.68
Chmp2aQ9DB34 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chmp2aQ9DB34 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chmp2aQ9DB34 Frmd6-201ENSMUST00000057859 4662 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms