Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Gm28196-201ENSMUST00000187719 640 ntBASIC10.29□□□□□ -0.76
Pcdhga4Q91XY4 Tcstv1-202ENSMUST00000190512 875 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pcdhga4Q91XY4 Plet1os-202ENSMUST00000190941 1119 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Pcdhga4Q91XY4 Gm36991-201ENSMUST00000191800 648 ntBASIC10.29□□□□□ -0.76
Pcdhga4Q91XY4 Gm45258-201ENSMUST00000210042 853 ntBASIC10.29□□□□□ -0.76
Pcdhga4Q91XY4 AC164556.1-201ENSMUST00000221318 751 ntBASIC10.29□□□□□ -0.76
Pcdhga4Q91XY4 Gm26782-203ENSMUST00000227103 751 ntBASIC10.29□□□□□ -0.76
Pcdhga4Q91XY4 Ttc24-202ENSMUST00000064550 671 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Pcdhga4Q91XY4 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pcdhga4Q91XY4 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Pcdhga4Q91XY4 Abcc3-201ENSMUST00000021231 4999 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pcdhga4Q91XY4 Gm37744-201ENSMUST00000194616 1590 ntBASIC10.29□□□□□ -0.76
Pcdhga4Q91XY4 Cxcl11-201ENSMUST00000077820 1581 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Pcdhga4Q91XY4 Hsd3b1-202ENSMUST00000107016 1855 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pcdhga4Q91XY4 Mlph-201ENSMUST00000027528 4499 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pcdhga4Q91XY4 Gm21039-201ENSMUST00000223359 2012 ntBASIC10.29□□□□□ -0.76
Pcdhga4Q91XY4 Mlxipl-201ENSMUST00000005507 3622 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pcdhga4Q91XY4 1700047M11Rik-202ENSMUST00000189594 2607 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Pcdhga4Q91XY4 Ptchd4-201ENSMUST00000048691 6890 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Pcdhga4Q91XY4 Togaram2-201ENSMUST00000097284 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pcdhga4Q91XY4 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Pcdhga4Q91XY4 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC10.29□□□□□ -0.76
Pcdhga4Q91XY4 Rbp1-201ENSMUST00000052068 2652 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pcdhga4Q91XY4 March10-204ENSMUST00000138977 2979 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Pcdhga4Q91XY4 Atxn7l3-203ENSMUST00000107134 3712 ntAPPRIS ALT1 TSL 5 BASIC10.29□□□□□ -0.76
Pcdhga4Q91XY4 Dnajc10-201ENSMUST00000028392 4042 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pcdhga4Q91XY4 Nkx2-2os-201ENSMUST00000136998 4345 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Pcdhga4Q91XY4 Vmn1r213-204ENSMUST00000228758 5975 ntAPPRIS P2 BASIC10.29□□□□□ -0.76
Pcdhga4Q91XY4 Nampt-201ENSMUST00000020886 4527 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Pcdhga4Q91XY4 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Pcdhga4Q91XY4 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Pcdhga4Q91XY4 Zfp780b-201ENSMUST00000081618 3004 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Pcdhga4Q91XY4 Ppp6r2-201ENSMUST00000088788 2887 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Pcdhga4Q91XY4 Gm44745-201ENSMUST00000206563 2723 ntBASIC10.28□□□□□ -0.76
Pcdhga4Q91XY4 Gm21115-201ENSMUST00000187565 2578 ntBASIC10.28□□□□□ -0.76
Pcdhga4Q91XY4 Gm7967-202ENSMUST00000191042 5042 ntBASIC10.28□□□□□ -0.76
Pcdhga4Q91XY4 Tekt2-202ENSMUST00000102616 1542 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Pcdhga4Q91XY4 Serpinb8-202ENSMUST00000112706 4581 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Pcdhga4Q91XY4 Itga3-202ENSMUST00000107739 4636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Pcdhga4Q91XY4 Rhobtb1-201ENSMUST00000020101 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Pcdhga4Q91XY4 Dcun1d2-202ENSMUST00000110838 2955 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Pcdhga4Q91XY4 4930417O13Rik-203ENSMUST00000204911 3458 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Pcdhga4Q91XY4 Pip5k1a-201ENSMUST00000005768 3480 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Pcdhga4Q91XY4 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Pcdhga4Q91XY4 Rpgr-202ENSMUST00000072393 2380 ntAPPRIS ALT2 TSL 2 BASIC10.28□□□□□ -0.76
Pcdhga4Q91XY4 Fut10-201ENSMUST00000066173 3183 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Pcdhga4Q91XY4 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Pcdhga4Q91XY4 4930451G09Rik-201ENSMUST00000090457 2206 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Pcdhga4Q91XY4 Actn2-201ENSMUST00000064204 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Pcdhga4Q91XY4 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
Pcdhga4Q91XY4 4930412O13Rik-202ENSMUST00000114919 558 ntAPPRIS ALT2 TSL 2 BASIC10.28□□□□□ -0.76
Pcdhga4Q91XY4 Gm12947-201ENSMUST00000116114 420 ntBASIC10.28□□□□□ -0.76
Pcdhga4Q91XY4 Gm15625-201ENSMUST00000117617 1093 ntBASIC10.28□□□□□ -0.76
Pcdhga4Q91XY4 Gm11578-201ENSMUST00000118530 459 ntBASIC10.28□□□□□ -0.76
Pcdhga4Q91XY4 Gm14213-201ENSMUST00000119778 768 ntBASIC10.28□□□□□ -0.76
Pcdhga4Q91XY4 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Pcdhga4Q91XY4 Gm5257-201ENSMUST00000121823 790 ntBASIC10.28□□□□□ -0.76
Pcdhga4Q91XY4 Gm45716-201ENSMUST00000124877 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Pcdhga4Q91XY4 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC10.28□□□□□ -0.76
Pcdhga4Q91XY4 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Pcdhga4Q91XY4 Gm5526-201ENSMUST00000153604 423 ntBASIC10.28□□□□□ -0.76
Pcdhga4Q91XY4 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Pcdhga4Q91XY4 Gm37988-201ENSMUST00000155020 825 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Pcdhga4Q91XY4 Gm16547-201ENSMUST00000159474 293 ntBASIC10.28□□□□□ -0.76
Pcdhga4Q91XY4 n-R5s130-201ENSMUST00000178128 119 ntBASIC10.28□□□□□ -0.76
Pcdhga4Q91XY4 Gm24312-201ENSMUST00000178677 119 ntBASIC10.28□□□□□ -0.76
Pcdhga4Q91XY4 n-R5s106-201ENSMUST00000179060 119 ntBASIC10.28□□□□□ -0.76
Pcdhga4Q91XY4 n-R5s118-201ENSMUST00000179887 119 ntBASIC10.28□□□□□ -0.76
Pcdhga4Q91XY4 Mir6941-201ENSMUST00000184711 59 ntBASIC10.28□□□□□ -0.76
Pcdhga4Q91XY4 Gm27440-201ENSMUST00000184785 107 ntBASIC10.28□□□□□ -0.76
Pcdhga4Q91XY4 Gm18558-201ENSMUST00000186253 1214 ntBASIC10.28□□□□□ -0.76
Pcdhga4Q91XY4 Gm28746-201ENSMUST00000187453 380 ntBASIC10.28□□□□□ -0.76
Pcdhga4Q91XY4 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC10.28□□□□□ -0.76
Pcdhga4Q91XY4 Gm43460-201ENSMUST00000202491 1057 ntBASIC10.28□□□□□ -0.76
Pcdhga4Q91XY4 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC10.28□□□□□ -0.76
Pcdhga4Q91XY4 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Pcdhga4Q91XY4 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC10.28□□□□□ -0.76
Pcdhga4Q91XY4 AC163703.1-201ENSMUST00000214133 339 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
Pcdhga4Q91XY4 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Pcdhga4Q91XY4 Gm25007-201ENSMUST00000083808 133 ntBASIC10.28□□□□□ -0.76
Pcdhga4Q91XY4 Gm42971-201ENSMUST00000199228 2079 ntBASIC10.28□□□□□ -0.76
Pcdhga4Q91XY4 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Pcdhga4Q91XY4 Stox2-206ENSMUST00000210030 2734 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Pcdhga4Q91XY4 Gm10425-201ENSMUST00000181085 3364 ntTSL 2 BASIC10.28□□□□□ -0.76
Pcdhga4Q91XY4 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Pcdhga4Q91XY4 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Pcdhga4Q91XY4 Tdrd1-202ENSMUST00000111604 5187 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Pcdhga4Q91XY4 Ctnnd1-205ENSMUST00000111670 5047 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Pcdhga4Q91XY4 Ccdc167-203ENSMUST00000129091 2256 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Pcdhga4Q91XY4 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Pcdhga4Q91XY4 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC10.28□□□□□ -0.76
Pcdhga4Q91XY4 Epb41-204ENSMUST00000105970 5059 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Pcdhga4Q91XY4 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Pcdhga4Q91XY4 Slc7a3-202ENSMUST00000101362 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Pcdhga4Q91XY4 AC122382.1-201ENSMUST00000225869 2371 ntBASIC10.28□□□□□ -0.76
Pcdhga4Q91XY4 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC10.27□□□□□ -0.76
Pcdhga4Q91XY4 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Pcdhga4Q91XY4 Bcat1-203ENSMUST00000111742 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Pcdhga4Q91XY4 Helz-201ENSMUST00000075012 6218 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Pcdhga4Q91XY4 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms