Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gm4960-201ENSMUST00000182928 1001 ntBASIC12.44□□□□□ -0.42
Vps54Q5SPW0 Mir124-2hg-203ENSMUST00000186923 673 ntTSL 3 BASIC12.44□□□□□ -0.42
Vps54Q5SPW0 Gm18894-201ENSMUST00000198794 694 ntBASIC12.44□□□□□ -0.42
Vps54Q5SPW0 Gm35611-201ENSMUST00000205323 799 ntTSL 3 BASIC12.44□□□□□ -0.42
Vps54Q5SPW0 Gm7238-201ENSMUST00000206467 973 ntBASIC12.44□□□□□ -0.42
Vps54Q5SPW0 Gm5905-201ENSMUST00000211731 580 ntBASIC12.44□□□□□ -0.42
Vps54Q5SPW0 Gm19121-201ENSMUST00000215720 1022 ntBASIC12.44□□□□□ -0.42
Vps54Q5SPW0 Gm7242-201ENSMUST00000221134 705 ntBASIC12.44□□□□□ -0.42
Vps54Q5SPW0 Xlr4b-201ENSMUST00000069077 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps54Q5SPW0 Olfr47-201ENSMUST00000078057 1059 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Vps54Q5SPW0 Ifnl3-201ENSMUST00000078364 582 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps54Q5SPW0 Gm10228-201ENSMUST00000089105 532 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Vps54Q5SPW0 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Vps54Q5SPW0 Acvr1-203ENSMUST00000112599 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps54Q5SPW0 Adam1b-201ENSMUST00000079368 3338 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Vps54Q5SPW0 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps54Q5SPW0 Gm28578-203ENSMUST00000189196 1470 ntTSL 5 BASIC12.44□□□□□ -0.42
Vps54Q5SPW0 Nmt1-201ENSMUST00000021314 4861 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps54Q5SPW0 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Vps54Q5SPW0 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Vps54Q5SPW0 Gm37484-201ENSMUST00000195378 2523 ntBASIC12.44□□□□□ -0.42
Vps54Q5SPW0 Sap130-202ENSMUST00000178164 4030 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Vps54Q5SPW0 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps54Q5SPW0 Anxa6-202ENSMUST00000108883 2489 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps54Q5SPW0 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps54Q5SPW0 Zbtb3-201ENSMUST00000172175 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps54Q5SPW0 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps54Q5SPW0 Sun1-201ENSMUST00000058716 4134 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps54Q5SPW0 Ybey-201ENSMUST00000049185 4522 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps54Q5SPW0 Gm42849-201ENSMUST00000202834 1584 ntTSL 5 BASIC12.43□□□□□ -0.42
Vps54Q5SPW0 Cdkl2-202ENSMUST00000086978 4066 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps54Q5SPW0 Bfar-201ENSMUST00000023365 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps54Q5SPW0 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps54Q5SPW0 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC12.43□□□□□ -0.42
Vps54Q5SPW0 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps54Q5SPW0 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
Vps54Q5SPW0 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps54Q5SPW0 St6galnac2-206ENSMUST00000144398 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps54Q5SPW0 Ppp6c-205ENSMUST00000204701 1495 ntTSL 5 BASIC12.43□□□□□ -0.42
Vps54Q5SPW0 AC154575.1-201ENSMUST00000227166 1474 ntBASIC12.43□□□□□ -0.42
Vps54Q5SPW0 Urod-201ENSMUST00000030446 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps54Q5SPW0 Use1-203ENSMUST00000110054 973 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps54Q5SPW0 Gm11771-201ENSMUST00000118124 732 ntBASIC12.43□□□□□ -0.42
Vps54Q5SPW0 Gm15793-201ENSMUST00000121857 495 ntBASIC12.43□□□□□ -0.42
Vps54Q5SPW0 Gm12847-201ENSMUST00000156219 413 ntTSL 5 BASIC12.43□□□□□ -0.42
Vps54Q5SPW0 Gm23582-201ENSMUST00000158530 139 ntBASIC12.43□□□□□ -0.42
Vps54Q5SPW0 Gm16574-201ENSMUST00000159301 745 ntBASIC12.43□□□□□ -0.42
Vps54Q5SPW0 Muc2-202ENSMUST00000167366 711 ntTSL 5 BASIC12.43□□□□□ -0.42
Vps54Q5SPW0 Psme1-208ENSMUST00000174259 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps54Q5SPW0 Gm6773-201ENSMUST00000182377 878 ntBASIC12.43□□□□□ -0.42
Vps54Q5SPW0 1700012J22Rik-201ENSMUST00000193492 830 ntBASIC12.43□□□□□ -0.42
Vps54Q5SPW0 D5Ertd605e-201ENSMUST00000201128 1081 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Vps54Q5SPW0 AC102523.1-201ENSMUST00000228706 1144 ntBASIC12.43□□□□□ -0.42
Vps54Q5SPW0 Gm8615-201ENSMUST00000025307 771 ntBASIC12.43□□□□□ -0.42
Vps54Q5SPW0 Fabp1-201ENSMUST00000067492 553 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps54Q5SPW0 Proca1-202ENSMUST00000078099 1254 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps54Q5SPW0 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps54Q5SPW0 Klhl22-202ENSMUST00000120488 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps54Q5SPW0 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Vps54Q5SPW0 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps54Q5SPW0 Gpr75-201ENSMUST00000109430 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps54Q5SPW0 Tram2-201ENSMUST00000037998 6492 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps54Q5SPW0 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Vps54Q5SPW0 Slc7a9-203ENSMUST00000118969 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps54Q5SPW0 Mettl8-204ENSMUST00000112186 2347 ntAPPRIS P2 TSL 2 BASIC12.43□□□□□ -0.42
Vps54Q5SPW0 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps54Q5SPW0 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps54Q5SPW0 AC154354.1-203ENSMUST00000225565 1364 ntBASIC12.43□□□□□ -0.42
Vps54Q5SPW0 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Vps54Q5SPW0 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Vps54Q5SPW0 Papss1-206ENSMUST00000200527 2811 ntTSL 5 BASIC12.43□□□□□ -0.42
Vps54Q5SPW0 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps54Q5SPW0 5730419F03Rik-201ENSMUST00000190504 2092 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vps54Q5SPW0 Ttc23-203ENSMUST00000107471 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps54Q5SPW0 Ncam1-201ENSMUST00000114476 2567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps54Q5SPW0 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps54Q5SPW0 Hdac9-208ENSMUST00000211107 1683 ntTSL 5 BASIC12.42□□□□□ -0.42
Vps54Q5SPW0 AC211878.3-201ENSMUST00000222629 2018 ntBASIC12.42□□□□□ -0.42
Vps54Q5SPW0 Klk13-201ENSMUST00000066834 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps54Q5SPW0 Atp5s-201ENSMUST00000021372 1485 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps54Q5SPW0 Gtf2h3-201ENSMUST00000031333 2672 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps54Q5SPW0 Kng1-202ENSMUST00000039492 1985 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps54Q5SPW0 Ccdc87-201ENSMUST00000088653 3163 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Vps54Q5SPW0 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps54Q5SPW0 Gm7823-201ENSMUST00000120761 1623 ntBASIC12.42□□□□□ -0.42
Vps54Q5SPW0 Gm42432-201ENSMUST00000197902 1617 ntBASIC12.42□□□□□ -0.42
Vps54Q5SPW0 Gm20821-202ENSMUST00000180352 684 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Vps54Q5SPW0 D330041H03Rik-202ENSMUST00000180390 411 ntTSL 2 BASIC12.42□□□□□ -0.42
Vps54Q5SPW0 4931440J10Rik-201ENSMUST00000181344 891 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vps54Q5SPW0 Zcwpw2-203ENSMUST00000187803 372 ntBASIC12.42□□□□□ -0.42
Vps54Q5SPW0 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Vps54Q5SPW0 Gm19798-201ENSMUST00000201502 457 ntBASIC12.42□□□□□ -0.42
Vps54Q5SPW0 Thyn1-202ENSMUST00000213683 1107 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Vps54Q5SPW0 AC155709.2-201ENSMUST00000219360 678 ntTSL 3 BASIC12.42□□□□□ -0.42
Vps54Q5SPW0 AC107711.4-201ENSMUST00000228948 440 ntBASIC12.42□□□□□ -0.42
Vps54Q5SPW0 Gm8991-201ENSMUST00000073014 1075 ntBASIC12.42□□□□□ -0.42
Vps54Q5SPW0 Gm10053-201ENSMUST00000073080 949 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Vps54Q5SPW0 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps54Q5SPW0 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps54Q5SPW0 9630001P10Rik-201ENSMUST00000181083 2799 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms