Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Ambra1-201ENSMUST00000045699 4690 ntTSL 5 BASIC8.48□□□□□ -1.05
Trim63Q38HM4 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Trim63Q38HM4 A430078G23Rik-201ENSMUST00000098966 2945 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
Trim63Q38HM4 Arhgef9-207ENSMUST00000113885 4578 ntTSL 5 BASIC8.48□□□□□ -1.05
Trim63Q38HM4 Tgfb1i1-204ENSMUST00000164710 3788 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Trim63Q38HM4 Mcm5-201ENSMUST00000164309 3381 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trim63Q38HM4 Kif3a-203ENSMUST00000120613 3161 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trim63Q38HM4 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Trim63Q38HM4 Rpap3-ps2-201ENSMUST00000184741 2161 ntBASIC8.48□□□□□ -1.05
Trim63Q38HM4 Thada-201ENSMUST00000047524 7884 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trim63Q38HM4 Tfdp1-203ENSMUST00000209396 2421 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trim63Q38HM4 Ankrd55-201ENSMUST00000022275 2412 ntAPPRIS P3 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trim63Q38HM4 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trim63Q38HM4 C230053D17Rik-201ENSMUST00000214451 2246 ntBASIC8.48□□□□□ -1.05
Trim63Q38HM4 Zscan26-201ENSMUST00000032820 3918 ntTSL 3 BASIC8.48□□□□□ -1.05
Trim63Q38HM4 Slco2b1-201ENSMUST00000032985 4381 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trim63Q38HM4 Kcne4-201ENSMUST00000057262 2657 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trim63Q38HM4 AC140393.1-202ENSMUST00000228347 1818 ntBASIC8.47□□□□□ -1.05
Trim63Q38HM4 Stam-201ENSMUST00000028050 3981 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trim63Q38HM4 Lrrc28-202ENSMUST00000053950 2923 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trim63Q38HM4 Gm4894-202ENSMUST00000216428 2294 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trim63Q38HM4 Trcg1-201ENSMUST00000093837 2701 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
Trim63Q38HM4 Tdrd3-205ENSMUST00000170865 2530 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trim63Q38HM4 Prkd3-204ENSMUST00000119284 4743 ntAPPRIS ALT1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trim63Q38HM4 AC153955.4-201ENSMUST00000217069 2752 ntBASIC8.47□□□□□ -1.05
Trim63Q38HM4 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
Trim63Q38HM4 AC160562.1-201ENSMUST00000216170 3468 ntTSL 5 BASIC8.47□□□□□ -1.05
Trim63Q38HM4 Gm45694-201ENSMUST00000212022 3251 ntBASIC8.47□□□□□ -1.05
Trim63Q38HM4 Btn2a2-203ENSMUST00000110433 2370 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trim63Q38HM4 Plekhs1-202ENSMUST00000178590 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trim63Q38HM4 Plekhs1-201ENSMUST00000039666 2378 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trim63Q38HM4 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Trim63Q38HM4 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trim63Q38HM4 Timeless-206ENSMUST00000105245 4402 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trim63Q38HM4 Creb5-202ENSMUST00000203487 2648 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
Trim63Q38HM4 Sars-201ENSMUST00000090553 3570 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trim63Q38HM4 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC8.47□□□□□ -1.05
Trim63Q38HM4 Gm11930-201ENSMUST00000117788 190 ntBASIC8.47□□□□□ -1.05
Trim63Q38HM4 Gm15568-201ENSMUST00000118589 1213 ntBASIC8.47□□□□□ -1.05
Trim63Q38HM4 Gm15285-201ENSMUST00000119271 473 ntBASIC8.47□□□□□ -1.05
Trim63Q38HM4 Gm11803-201ENSMUST00000119966 444 ntBASIC8.47□□□□□ -1.05
Trim63Q38HM4 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Trim63Q38HM4 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC8.47□□□□□ -1.05
Trim63Q38HM4 Gm28032-201ENSMUST00000184104 96 ntBASIC8.47□□□□□ -1.05
Trim63Q38HM4 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC8.47□□□□□ -1.05
Trim63Q38HM4 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC8.47□□□□□ -1.05
Trim63Q38HM4 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC8.47□□□□□ -1.05
Trim63Q38HM4 Gm7287-201ENSMUST00000205267 602 ntBASIC8.47□□□□□ -1.05
Trim63Q38HM4 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC8.47□□□□□ -1.05
Trim63Q38HM4 Gm7344-201ENSMUST00000212122 1222 ntBASIC8.47□□□□□ -1.05
Trim63Q38HM4 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC8.47□□□□□ -1.05
Trim63Q38HM4 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC8.47□□□□□ -1.05
Trim63Q38HM4 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC8.47□□□□□ -1.05
Trim63Q38HM4 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC8.47□□□□□ -1.05
Trim63Q38HM4 AC166095.1-201ENSMUST00000223731 1241 ntBASIC8.47□□□□□ -1.05
Trim63Q38HM4 AC163667.3-201ENSMUST00000225774 222 ntBASIC8.47□□□□□ -1.05
Trim63Q38HM4 AC159002.1-201ENSMUST00000226714 924 ntBASIC8.47□□□□□ -1.05
Trim63Q38HM4 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trim63Q38HM4 H2-M1-201ENSMUST00000041662 1057 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trim63Q38HM4 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trim63Q38HM4 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trim63Q38HM4 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC8.47□□□□□ -1.05
Trim63Q38HM4 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trim63Q38HM4 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
Trim63Q38HM4 Hectd2os-203ENSMUST00000142067 2662 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Trim63Q38HM4 Arhgap24-201ENSMUST00000070000 3632 ntTSL 5 BASIC8.47□□□□□ -1.05
Trim63Q38HM4 Mfsd8-201ENSMUST00000026859 3151 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trim63Q38HM4 Ppid-201ENSMUST00000029382 1752 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trim63Q38HM4 Gm8446-201ENSMUST00000188834 2712 ntBASIC8.47□□□□□ -1.05
Trim63Q38HM4 Serinc3-201ENSMUST00000017851 3683 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trim63Q38HM4 Ryr2-202ENSMUST00000170156 16813 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
Trim63Q38HM4 Ryr2-201ENSMUST00000021750 16814 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trim63Q38HM4 Nudt13-207ENSMUST00000224311 1574 ntBASIC8.47□□□□□ -1.05
Trim63Q38HM4 Dmbx1-202ENSMUST00000084338 4031 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trim63Q38HM4 Ssb-206ENSMUST00000166411 2088 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
Trim63Q38HM4 Snrpb2-201ENSMUST00000008477 2061 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trim63Q38HM4 Srsf3-202ENSMUST00000130216 2566 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trim63Q38HM4 Ctns-201ENSMUST00000006103 2570 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trim63Q38HM4 Gm16758-201ENSMUST00000149552 3848 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Trim63Q38HM4 Gm12187-201ENSMUST00000119584 1375 ntBASIC8.47□□□□□ -1.05
Trim63Q38HM4 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC8.47□□□□□ -1.05
Trim63Q38HM4 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trim63Q38HM4 Casp8-203ENSMUST00000190213 1628 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
Trim63Q38HM4 Gm36958-201ENSMUST00000192388 1875 ntBASIC8.47□□□□□ -1.05
Trim63Q38HM4 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC8.47□□□□□ -1.05
Trim63Q38HM4 Calr4-201ENSMUST00000030285 1606 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trim63Q38HM4 Kdm5a-201ENSMUST00000005108 10944 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
Trim63Q38HM4 C87436-202ENSMUST00000113698 2922 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Trim63Q38HM4 Pcm1-201ENSMUST00000045218 6624 ntAPPRIS P2 TSL 1 (best) BASIC8.46□□□□□ -1.05
Trim63Q38HM4 Wdr95-201ENSMUST00000110502 2482 ntTSL 5 BASIC8.46□□□□□ -1.05
Trim63Q38HM4 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Trim63Q38HM4 AC125020.1-201ENSMUST00000220137 2225 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Trim63Q38HM4 AC125351.1-201ENSMUST00000221438 2223 ntBASIC8.46□□□□□ -1.05
Trim63Q38HM4 Lrit1-201ENSMUST00000120052 4325 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Trim63Q38HM4 Bcas1-202ENSMUST00000068137 2769 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.05
Trim63Q38HM4 Plat-201ENSMUST00000033941 2525 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Trim63Q38HM4 Ciao1-201ENSMUST00000003759 3075 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Trim63Q38HM4 Cdh1-201ENSMUST00000000312 4430 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Trim63Q38HM4 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Trim63Q38HM4 Setd5-202ENSMUST00000113155 6362 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms