Protein–RNA interactions for Protein: Q9Z1B8

Phf1, PHD finger protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phf1Q9Z1B8 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Phf1Q9Z1B8 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Phf1Q9Z1B8 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Phf1Q9Z1B8 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Phf1Q9Z1B8 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Phf1Q9Z1B8 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Phf1Q9Z1B8 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Phf1Q9Z1B8 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Phf1Q9Z1B8 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Phf1Q9Z1B8 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Phf1Q9Z1B8 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Phf1Q9Z1B8 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Phf1Q9Z1B8 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Phf1Q9Z1B8 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.17■□□□□ 0.5
Phf1Q9Z1B8 Gm12251-201ENSMUST00000117893 792 ntBASIC18.17■□□□□ 0.5
Phf1Q9Z1B8 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.17■□□□□ 0.5
Phf1Q9Z1B8 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Phf1Q9Z1B8 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.17■□□□□ 0.5
Phf1Q9Z1B8 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Phf1Q9Z1B8 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Phf1Q9Z1B8 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Phf1Q9Z1B8 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Phf1Q9Z1B8 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Phf1Q9Z1B8 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.16■□□□□ 0.5
Phf1Q9Z1B8 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Phf1Q9Z1B8 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Phf1Q9Z1B8 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Phf1Q9Z1B8 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Phf1Q9Z1B8 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Phf1Q9Z1B8 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Phf1Q9Z1B8 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Phf1Q9Z1B8 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Phf1Q9Z1B8 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.15■□□□□ 0.5
Phf1Q9Z1B8 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Phf1Q9Z1B8 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Phf1Q9Z1B8 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Phf1Q9Z1B8 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Phf1Q9Z1B8 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.15■□□□□ 0.5
Phf1Q9Z1B8 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Phf1Q9Z1B8 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.15■□□□□ 0.5
Phf1Q9Z1B8 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Phf1Q9Z1B8 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Phf1Q9Z1B8 Gm8495-201ENSMUST00000188740 694 ntBASIC18.15■□□□□ 0.5
Phf1Q9Z1B8 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Phf1Q9Z1B8 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Phf1Q9Z1B8 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Phf1Q9Z1B8 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Phf1Q9Z1B8 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Phf1Q9Z1B8 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Phf1Q9Z1B8 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Phf1Q9Z1B8 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Phf1Q9Z1B8 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Phf1Q9Z1B8 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Phf1Q9Z1B8 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.14■□□□□ 0.49
Phf1Q9Z1B8 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.14■□□□□ 0.49
Phf1Q9Z1B8 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Phf1Q9Z1B8 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.14■□□□□ 0.49
Phf1Q9Z1B8 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Phf1Q9Z1B8 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Phf1Q9Z1B8 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
Phf1Q9Z1B8 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.14■□□□□ 0.49
Phf1Q9Z1B8 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Phf1Q9Z1B8 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Phf1Q9Z1B8 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
Phf1Q9Z1B8 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Phf1Q9Z1B8 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Phf1Q9Z1B8 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Phf1Q9Z1B8 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.13■□□□□ 0.49
Phf1Q9Z1B8 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.13■□□□□ 0.49
Phf1Q9Z1B8 Gm18284-201ENSMUST00000172604 624 ntBASIC18.13■□□□□ 0.49
Phf1Q9Z1B8 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Phf1Q9Z1B8 Gm43017-201ENSMUST00000198296 752 ntBASIC18.13■□□□□ 0.49
Phf1Q9Z1B8 Gm43173-201ENSMUST00000202246 593 ntBASIC18.13■□□□□ 0.49
Phf1Q9Z1B8 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Phf1Q9Z1B8 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.13■□□□□ 0.49
Phf1Q9Z1B8 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Phf1Q9Z1B8 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.13■□□□□ 0.49
Phf1Q9Z1B8 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Phf1Q9Z1B8 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Phf1Q9Z1B8 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Phf1Q9Z1B8 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Phf1Q9Z1B8 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.13■□□□□ 0.49
Phf1Q9Z1B8 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Phf1Q9Z1B8 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Phf1Q9Z1B8 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Phf1Q9Z1B8 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Phf1Q9Z1B8 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Phf1Q9Z1B8 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Phf1Q9Z1B8 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.12■□□□□ 0.49
Phf1Q9Z1B8 Gm8493-201ENSMUST00000196881 489 ntBASIC18.12■□□□□ 0.49
Phf1Q9Z1B8 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Phf1Q9Z1B8 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Phf1Q9Z1B8 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Phf1Q9Z1B8 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Phf1Q9Z1B8 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Phf1Q9Z1B8 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Phf1Q9Z1B8 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Phf1Q9Z1B8 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Phf1Q9Z1B8 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.11■□□□□ 0.49
Phf1Q9Z1B8 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms